##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547852_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3342736 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.531857436543 31.0 31.0 33.0 30.0 34.0 2 31.94454303301248 31.0 31.0 34.0 30.0 34.0 3 31.954299711374155 33.0 31.0 34.0 30.0 34.0 4 35.77077579563567 37.0 35.0 37.0 35.0 37.0 5 35.72627990963091 37.0 35.0 37.0 33.0 37.0 6 35.776725113798996 37.0 35.0 37.0 35.0 37.0 7 36.06237944007543 37.0 35.0 37.0 35.0 37.0 8 36.09748541314659 37.0 35.0 37.0 35.0 37.0 9 37.87741149764744 39.0 38.0 39.0 35.0 39.0 10 37.426390836727755 39.0 37.0 39.0 35.0 39.0 11 37.11089748038732 39.0 37.0 39.0 33.0 39.0 12 36.73459764695746 39.0 35.0 39.0 33.0 39.0 13 36.60654894673106 39.0 35.0 39.0 33.0 39.0 14 37.705846348619815 40.0 36.0 41.0 33.0 41.0 15 37.86168575681717 40.0 36.0 41.0 33.0 41.0 16 37.92286169173994 40.0 36.0 41.0 33.0 41.0 17 37.84638780926762 40.0 36.0 41.0 33.0 41.0 18 37.73713060199788 39.0 36.0 41.0 33.0 41.0 19 37.65794726236233 39.0 36.0 41.0 33.0 41.0 20 37.505719267091386 39.0 35.0 41.0 33.0 41.0 21 37.38942231752672 39.0 35.0 41.0 33.0 41.0 22 37.33080207351104 39.0 35.0 41.0 32.0 41.0 23 37.22717767720813 39.0 35.0 41.0 32.0 41.0 24 37.259752490175714 39.0 35.0 41.0 32.0 41.0 25 37.22244233466238 39.0 35.0 41.0 32.0 41.0 26 37.11833869022262 39.0 35.0 41.0 32.0 41.0 27 37.06088814671575 39.0 35.0 41.0 32.0 41.0 28 36.99843421676136 39.0 35.0 41.0 32.0 41.0 29 36.99846233743855 39.0 35.0 41.0 32.0 41.0 30 36.90100265172003 39.0 35.0 41.0 31.0 41.0 31 36.75859954241077 39.0 35.0 41.0 31.0 41.0 32 36.618094877968225 39.0 35.0 41.0 31.0 41.0 33 36.50129385030706 39.0 35.0 41.0 30.0 41.0 34 36.33041735871454 39.0 35.0 41.0 30.0 41.0 35 36.225657964015106 39.0 35.0 41.0 30.0 41.0 36 36.10856196839954 39.0 35.0 41.0 30.0 41.0 37 36.015767921846056 39.0 35.0 41.0 29.0 41.0 38 35.904278710613106 38.0 35.0 41.0 29.0 41.0 39 35.832362172783014 38.0 35.0 41.0 29.0 41.0 40 35.71000761053221 38.0 35.0 40.0 28.0 41.0 41 35.6451044892567 38.0 35.0 40.0 28.0 41.0 42 35.582979631056716 38.0 35.0 40.0 27.0 41.0 43 35.538405066987046 38.0 35.0 40.0 27.0 41.0 44 35.37745487528779 38.0 34.0 40.0 27.0 41.0 45 35.24534812201741 38.0 34.0 40.0 26.0 41.0 46 35.23412019375745 38.0 34.0 40.0 27.0 41.0 47 35.158935674250074 38.0 34.0 40.0 26.0 41.0 48 35.07230005600203 38.0 34.0 40.0 26.0 41.0 49 34.9558840422935 37.0 34.0 40.0 26.0 41.0 50 34.874014579673656 37.0 34.0 40.0 26.0 41.0 51 34.56587747282465 37.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 2.0 11 7.0 12 10.0 13 12.0 14 35.0 15 77.0 16 200.0 17 461.0 18 981.0 19 1934.0 20 3634.0 21 5764.0 22 9069.0 23 13768.0 24 21242.0 25 32541.0 26 44423.0 27 50703.0 28 54244.0 29 59250.0 30 69229.0 31 84073.0 32 105852.0 33 138474.0 34 234942.0 35 343241.0 36 235480.0 37 317983.0 38 522268.0 39 992695.0 40 141.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.65411926039029 24.042431110323996 29.24508546292618 14.058364166359533 2 31.946315832300247 25.35749158772933 29.87334327329469 12.82284930667573 3 28.97019088555004 25.265740399481146 32.39609708933042 13.3679716256384 4 25.355846228957358 27.688306824110548 31.90266895142183 15.053177995510264 5 23.03577069801504 31.68111391387175 30.868635752269995 14.414479635843215 6 21.226055542525643 41.00892203273008 27.419694525681958 10.345327899062324 7 88.91575643425027 2.9541070548197643 6.758565438610767 1.3715710723192018 8 89.9319599274367 2.191468306201866 6.321169245791472 1.5554025205699762 9 85.17854835081204 4.81207609574911 7.763700154603893 2.2456753988349663 10 43.02981150769909 34.00268522551587 13.211333470546283 9.75616979623877 11 29.31472901240182 24.663778413850213 28.448851479745933 17.57264109400204 12 29.928477749962905 22.801740849411978 29.663365578376517 17.6064158222486 13 23.56318297346844 28.19355162956333 29.74335993030859 18.499905466659648 14 17.95777470910057 32.36241210792596 30.856131025602977 18.823682157370488 15 17.535814973123813 27.46489701849024 37.724038033515065 17.275249974870885 16 22.055436026057695 24.391007845070625 35.57367378099856 17.97988234787312 17 21.199071658665236 24.17244436892414 29.84953044452209 24.778953527888532 18 22.156939704481598 26.188427683191257 32.534785876000974 19.11984673632617 19 25.30190837685058 27.45008878954246 27.993984568329655 19.254018265277306 20 26.281465242842987 27.259705821817814 27.853082026220438 18.605746909118757 21 23.84714198189746 26.320564950387947 31.41199305000455 18.42030001771004 22 23.336243125391896 23.564409513643913 30.268827690849655 22.83051967011454 23 19.863638648101436 27.915844984467814 30.221202033304458 21.999314334126296 24 20.120524025827944 27.063668803040386 33.87066762077532 18.945139550356355 25 21.41524188568885 27.22617041848354 31.184754045787642 20.173833650039967 26 19.32055059089321 31.013935889642497 28.228911885353792 21.4366016341105 27 19.120714289133215 29.745124951536706 31.285689327544862 19.84847143178522 28 18.05075243752423 28.17739719798393 34.26707942236539 19.504770942126452 29 19.451102330545996 26.576852015833737 33.14958166005332 20.82246399356695 30 20.60985372461361 27.362047137434725 32.48656190617506 19.541537231776605 31 24.626114655778977 26.73639198548734 28.55771439922267 20.07977895951101 32 24.680561073324366 27.48138052182404 28.648029637997137 19.190028766854457 33 24.345476280507945 26.97481942935368 28.051213137980387 20.628491152157995 34 20.362870415132996 27.60005576270456 30.534568090330794 21.50250573183165 35 20.7938646665486 27.066241545847475 30.40898234260797 21.730911444995957 36 25.106409839125792 26.728793419522212 28.89285902326717 19.271937718084825 37 21.4950567439367 29.000166330814043 29.413899272930916 20.09087765231834 38 21.20388807252502 30.37769061032639 27.403988828313093 21.014432488835492 39 20.823361461988025 27.90241287376568 28.955472403444364 22.31875326080193 40 22.30502199395944 26.814142666366713 29.312156269594723 21.56867907007912 41 19.44452089545809 26.284875622843085 30.434919179977122 23.835684301721706 42 21.335127871300635 27.71555994849728 28.28551222710977 22.66379995309232 43 21.224589677437883 27.244807846027925 29.176010310117224 22.35459216641697 44 20.919510245499495 28.357608856936356 29.236858669066297 21.486022228497852 45 19.956047979858415 29.978526572245013 28.183440152019184 21.88198529587739 46 22.630025224845753 28.697420316770454 28.379776326936977 20.292778131446816 47 20.733674451108314 27.97842844903097 29.585644813111177 21.702252286749538 48 21.23945773761374 27.64223677849522 29.863530951890905 21.254774532000134 49 21.759480856400266 26.20263759985832 30.247138870673606 21.79074267306781 50 20.223553400567678 28.177277535527782 30.16116139593435 21.43800766797019 51 19.437012076335076 29.142684316081198 28.91122721028523 22.5090763972985 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1292.0 1 2893.5 2 4495.0 3 23573.0 4 42651.0 5 30901.5 6 19152.0 7 17565.0 8 15978.0 9 16408.0 10 16838.0 11 16922.0 12 17006.0 13 16757.5 14 16509.0 15 15600.0 16 14691.0 17 14043.0 18 13395.0 19 13503.0 20 13611.0 21 15243.5 22 16876.0 23 17885.0 24 18894.0 25 23510.5 26 31807.5 27 35488.0 28 44657.5 29 53827.0 30 59933.5 31 66040.0 32 77750.5 33 89461.0 34 101181.5 35 112902.0 36 122744.0 37 132586.0 38 144648.5 39 156711.0 40 178755.5 41 200800.0 42 220574.5 43 240349.0 44 251828.5 45 263308.0 46 272607.0 47 281906.0 48 282039.5 49 282173.0 50 266049.0 51 249925.0 52 230539.5 53 211154.0 54 189906.0 55 168658.0 56 156634.5 57 144611.0 58 133496.5 59 122382.0 60 107198.0 61 92014.0 62 81237.0 63 70460.0 64 58557.5 65 46655.0 66 38324.5 67 29994.0 68 25094.5 69 20195.0 70 16753.5 71 13312.0 72 11340.5 73 9369.0 74 7060.5 75 3298.0 76 1844.0 77 1406.5 78 969.0 79 782.0 80 595.0 81 508.5 82 422.0 83 291.0 84 160.0 85 136.0 86 112.0 87 79.5 88 47.0 89 35.5 90 24.0 91 16.0 92 8.0 93 7.0 94 6.0 95 3.5 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 3342736.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.314040484503597 #Duplication Level Percentage of deduplicated Percentage of total 1 76.23721383978118 13.962114206875102 2 8.544160148199447 3.1295618972041384 3 2.96446934473694 1.6287423478374652 4 1.5824004614614382 1.159205844556078 5 0.9800575442956394 0.8974406771686758 6 0.6894985225699706 0.7576502313811114 7 0.5173139108115219 0.6631875534059365 8 0.4090506650442251 0.5993096351866446 9 0.3499996453618692 0.5768916907247257 >10 4.686369076720368 21.565466011228406 >50 1.9287701756593718 25.147605011433953 >100 1.1031923024622918 27.69498716388953 >500 0.005002908597248366 0.643685422053564 >1k 0.002334690678715904 0.7435244638401033 >5k 0.0 0.0 >10k+ 1.6676361990827887E-4 0.8306278432145939 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27197 0.813614954935119 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAATT 3380 0.10111477544143481 No Hit >>END_MODULE >>Adapter Content warn #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.041911775264334365 0.0 2 0.0 0.0 0.0 0.12118815245954212 0.0 3 0.0 0.0 0.0 0.19475064737388773 0.0 4 0.0 0.0 0.0 0.3020280393067236 0.0 5 0.0 0.0 0.0 0.5337244700149817 0.0 6 0.0 0.0 0.0 0.8871176186213928 0.0 7 0.0 0.0 0.0 1.0838726121356876 0.0 8 0.0 0.0 0.0 1.562073702499988 0.0 9 0.0 0.0 0.0 1.7955351544363658 0.0 10 0.0 0.0 0.0 2.1572448437447647 0.0 11 0.0 0.0 0.0 2.54770343814169 0.0 12 0.0 0.0 0.0 2.8475476376237907 0.0 13 0.0 0.0 0.0 2.981061023066135 0.0 14 0.0 0.0 0.0 3.0451103527170558 0.0 15 0.0 0.0 0.0 3.123728586403473 0.0 16 0.0 0.0 0.0 3.279678682372763 0.0 17 0.0 0.0 0.0 3.4844510604486865 0.0 18 0.0 0.0 0.0 3.744746818175291 0.0 19 0.0 0.0 0.0 3.897705352740988 0.0 20 0.0 0.0 0.0 4.056826503798086 0.0 21 0.0 0.0 0.0 4.2419443234524055 0.0 22 0.0 0.0 0.0 4.453447714686413 0.0 23 0.0 0.0 0.0 4.683109883640228 0.0 24 0.0 0.0 0.0 4.859970993820631 0.0 25 0.0 0.0 0.0 5.011553410140675 0.0 26 0.0 0.0 0.0 5.157451859793893 0.0 27 0.0 0.0 0.0 5.31570545804395 0.0 28 0.0 0.0 0.0 5.48407053383815 0.0 29 0.0 0.0 0.0 5.681304177177019 0.0 30 0.0 0.0 0.0 5.9101885401659 0.0 31 0.0 0.0 0.0 6.109366698417105 0.0 32 0.0 0.0 0.0 6.298104307369772 0.0 33 0.0 0.0 0.0 6.490282211936569 0.0 34 0.0 0.0 0.0 6.695892227205499 0.0 35 0.0 0.0 0.0 6.930699881773493 0.0 36 0.0 0.0 0.0 7.139690361428483 0.0 37 0.0 0.0 0.0 7.352869027048501 0.0 38 0.0 0.0 0.0 7.591535795827131 0.0 39 0.0 0.0 0.0 7.94002278373165 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTACCG 20 7.03522E-4 45.000004 30 CGTTTTT 12590 0.0 42.83757 1 CGACGGT 425 0.0 40.764706 28 GCGCGAC 975 0.0 39.692307 9 CGCGTAA 160 0.0 39.375004 31 TACGGGA 1565 0.0 39.10543 4 AGGGCGA 2715 0.0 38.618786 6 CGAATCG 35 6.2518684E-6 38.571426 36 ACGGGAT 1835 0.0 38.378746 5 TAGGGAC 4460 0.0 38.088566 5 CGCGACC 1015 0.0 37.906403 10 GGGCGAT 4890 0.0 37.546013 7 GCGATCG 60 1.5643309E-10 37.500004 9 TGCGTAC 30 1.1403879E-4 37.500004 39 CGCCGGT 920 0.0 37.41848 28 TAGACGG 440 0.0 37.329544 2 ATAGGGA 4335 0.0 37.31834 4 CACGCCG 950 0.0 37.184208 26 GACCGAT 1145 0.0 37.139736 9 TCTAGCG 170 0.0 37.058823 1 >>END_MODULE