##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547851_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1488207 Sequences flagged as poor quality 0 Sequence length 51 %GC 46 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.50206725274105 31.0 31.0 33.0 30.0 34.0 2 31.91858390667427 31.0 31.0 34.0 30.0 34.0 3 31.97477165474964 33.0 31.0 34.0 30.0 34.0 4 35.73068598655966 37.0 35.0 37.0 35.0 37.0 5 35.6250467844863 37.0 35.0 37.0 33.0 37.0 6 35.66802534862422 37.0 35.0 37.0 33.0 37.0 7 36.01058522100756 37.0 35.0 37.0 35.0 37.0 8 36.04537406422628 37.0 35.0 37.0 35.0 37.0 9 37.82829807950104 39.0 38.0 39.0 35.0 39.0 10 37.33591093174538 39.0 37.0 39.0 34.0 39.0 11 37.009172111137765 39.0 37.0 39.0 33.0 39.0 12 35.97829938980263 37.0 35.0 39.0 32.0 39.0 13 35.53938128230817 37.0 35.0 39.0 31.0 39.0 14 36.23208196171635 38.0 35.0 41.0 30.0 41.0 15 36.64153306630059 38.0 35.0 41.0 31.0 41.0 16 36.88989502132432 38.0 35.0 41.0 32.0 41.0 17 36.86351898627006 38.0 35.0 41.0 32.0 41.0 18 36.8170355333633 38.0 35.0 41.0 32.0 41.0 19 36.73586806136512 38.0 35.0 41.0 32.0 41.0 20 36.54390417462087 38.0 35.0 40.0 31.0 41.0 21 36.40038516147283 38.0 35.0 40.0 31.0 41.0 22 36.35806376397907 37.0 35.0 40.0 31.0 41.0 23 36.34106344077134 37.0 35.0 40.0 31.0 41.0 24 36.373255870991066 37.0 35.0 40.0 31.0 41.0 25 36.334696046988086 37.0 35.0 40.0 31.0 41.0 26 36.22215121955481 37.0 35.0 40.0 31.0 41.0 27 36.13022113187211 37.0 35.0 40.0 31.0 41.0 28 36.10851648997754 37.0 35.0 40.0 31.0 41.0 29 36.12750847160375 37.0 35.0 40.0 31.0 41.0 30 36.04012546641697 37.0 35.0 40.0 31.0 41.0 31 35.81286272675777 36.0 35.0 40.0 30.0 41.0 32 35.66609013396658 36.0 34.0 40.0 30.0 41.0 33 35.58471906125963 36.0 34.0 40.0 30.0 41.0 34 35.43598639167804 36.0 34.0 40.0 29.0 41.0 35 35.39808910991549 36.0 34.0 40.0 29.0 41.0 36 35.22254834172934 36.0 34.0 40.0 29.0 41.0 37 35.07925443167516 36.0 34.0 40.0 27.0 41.0 38 34.953112033473836 36.0 34.0 40.0 27.0 41.0 39 34.90208956146557 36.0 34.0 40.0 27.0 41.0 40 34.70707367993834 36.0 34.0 40.0 25.0 41.0 41 34.65348704850871 36.0 34.0 40.0 25.0 41.0 42 34.584779536717676 36.0 34.0 40.0 25.0 41.0 43 34.56292773787518 35.0 34.0 40.0 25.0 41.0 44 34.39448678846424 35.0 34.0 40.0 24.0 41.0 45 34.26233581753076 35.0 34.0 40.0 24.0 41.0 46 34.28691841927904 35.0 34.0 40.0 24.0 41.0 47 34.20219297449884 35.0 33.0 40.0 24.0 41.0 48 34.11345263125358 35.0 33.0 40.0 23.0 41.0 49 34.03800882538518 35.0 33.0 40.0 24.0 41.0 50 33.94254965875043 35.0 33.0 39.0 24.0 41.0 51 33.596022596318925 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 0.0 10 0.0 11 2.0 12 2.0 13 6.0 14 13.0 15 61.0 16 146.0 17 364.0 18 738.0 19 1404.0 20 2387.0 21 3942.0 22 5719.0 23 8621.0 24 12347.0 25 17282.0 26 22114.0 27 25563.0 28 28300.0 29 32132.0 30 38318.0 31 45988.0 32 57558.0 33 77968.0 34 149805.0 35 240229.0 36 89809.0 37 115774.0 38 181980.0 39 329595.0 40 39.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.07779092559032 23.97442022514341 29.730675907316655 13.217112941949608 2 31.339188701571757 25.987648223667808 29.319509987521897 13.353653087238538 3 29.910959967262617 24.89680535033097 31.166027306685155 14.026207375721253 4 26.239629298881134 27.768045708695094 30.73517326554707 15.257151726876705 5 23.37383173174162 31.351418183088775 30.4999237337279 14.7748263514417 6 20.809941090184363 41.102548234217416 27.388461416993735 10.699049258604482 7 88.48789180537385 4.06663857917615 5.885068407822299 1.5604012076277023 8 89.65990618240608 2.7392694699057323 5.423035908311142 2.177788439377049 9 85.82885310981604 4.31962757869033 7.234544656758099 2.6169746547355306 10 53.240644614626866 21.95837003857662 13.089912895181921 11.711072451614594 11 46.24665789100575 21.084566864690192 19.219369348484452 13.449405895819599 12 42.185865272774556 20.54143005643704 23.041082322553248 14.23162234823516 13 24.00479234407579 37.88901678328351 23.596650197183592 14.50954067545711 14 14.96901976673944 40.697833029948114 29.87837041486836 14.454776788444082 15 14.59440790158896 24.258386098170483 47.31284021644838 13.834365783792174 16 19.736165735008637 19.719501386567863 43.52707654244335 17.017256335980143 17 20.04788312378587 19.63322306641482 27.26730891603117 33.05158489376814 18 23.747973232218367 23.545582032607022 33.03088884812395 19.67555588705066 19 29.64278490828225 25.53959227446182 25.56223697375432 19.25538584350161 20 29.87790005019463 26.671760044133645 24.55941948935867 18.890920416313055 21 22.669830205072277 27.8848305376873 30.336774386896447 19.108564870343976 22 21.796363005952802 23.662635641412788 29.431725559683564 25.109275792950847 23 18.470817567717393 29.46028341487441 27.882478714318644 24.186420303089555 24 20.109971260718435 26.82355344384215 35.031148220644035 18.035327074795372 25 19.76983040665714 25.463460392270697 33.368610683863196 21.398098517208965 26 16.796924083813607 33.81095506203102 27.16994342856874 22.22217742558663 27 18.35033701628873 32.24531264803888 31.211518290130336 18.19283204554205 28 15.388114691034243 28.54730558316148 37.21908309798301 18.845496627821266 29 17.504016578338902 26.514120683480186 35.83936912002161 20.142493618159303 30 21.063467649325666 28.569345527873473 31.747666823230908 18.619519999569953 31 28.971305739053776 25.69494700670001 25.897539791171525 19.43620746307469 32 30.233562938489065 26.929990250012263 25.52534694434309 17.311099867155576 33 28.44288462559308 26.741575600706085 25.318453682854603 19.49708609084623 34 19.59021829624508 26.854731902215217 30.63088669788544 22.924163103654262 35 19.84367766043299 27.75057502081364 29.811578631198483 22.594168687554887 36 30.507919933181338 24.049073818359943 27.299629688611866 18.14337655984685 37 21.268076282398887 30.45369360579543 29.230745454093416 19.047484657712268 38 21.42040724173452 32.07571258568196 24.154973064902936 22.348907107680585 39 20.6963144240015 29.51713034544254 27.27174378295493 22.514811447601037 40 24.599198901765682 25.169952835862215 26.461843009742598 23.76900525262951 41 18.869149251414623 23.819603052532344 27.64131602660114 29.6699316694519 42 22.175140958213476 26.07950372495224 26.390683554102353 25.354671762731932 43 21.90521883044496 25.712014524861125 27.511764156464793 24.871002488229124 44 21.3140376305178 28.421180655648037 28.750973486887244 21.513808226946924 45 18.550645172344975 33.27359701976943 24.075548629995694 24.1002091778899 46 23.182326114579492 29.90168706369477 26.541737809323568 20.374249012402174 47 21.237368188699556 27.45310296215513 28.442548650826126 22.866980198319187 48 23.204030084524533 25.53703886623299 29.676382384977355 21.58254866426512 49 22.126021447285225 22.837212833967317 31.295511981868113 23.741253736879344 50 19.598147300745126 30.221871016599167 27.765089130745924 22.41489255190978 51 18.489296179899707 33.76761431709433 24.126549599618873 23.616539903387096 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 521.0 1 1170.0 2 1819.0 3 6295.0 4 10771.0 5 7922.5 6 5074.0 7 4858.0 8 4642.0 9 5097.0 10 5552.0 11 5748.0 12 5944.0 13 5962.0 14 5980.0 15 5571.0 16 5162.0 17 5065.5 18 4969.0 19 5125.0 20 5281.0 21 5760.0 22 6239.0 23 6462.0 24 6685.0 25 7211.5 26 10225.5 27 12713.0 28 13736.0 29 14759.0 30 17842.0 31 20925.0 32 23698.5 33 26472.0 34 31161.5 35 35851.0 36 37254.0 37 38657.0 38 47680.0 39 56703.0 40 76715.5 41 96728.0 42 118873.5 43 141019.0 44 143654.5 45 146290.0 46 143842.5 47 141395.0 48 139398.5 49 137402.0 50 126344.0 51 115286.0 52 105709.5 53 96133.0 54 86849.5 55 77566.0 56 75491.0 57 73416.0 58 65809.0 59 58202.0 60 49689.0 61 41176.0 62 35522.5 63 29869.0 64 24663.0 65 19457.0 66 15769.0 67 12081.0 68 9709.5 69 7338.0 70 6004.5 71 4671.0 72 4378.0 73 4085.0 74 3023.0 75 1470.0 76 979.0 77 664.0 78 349.0 79 240.5 80 132.0 81 114.0 82 96.0 83 87.5 84 79.0 85 49.5 86 20.0 87 17.0 88 14.0 89 9.5 90 5.0 91 2.5 92 0.0 93 0.5 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1488207.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.001429908320002 #Duplication Level Percentage of deduplicated Percentage of total 1 77.85603981528067 15.572321233047075 2 8.870295646152872 3.548371932652055 3 3.120823957549617 1.8726282492940352 4 1.5340342269932412 1.227315122726767 5 0.8859199133574784 0.8859832525702266 6 0.5988364103156415 0.7186550692486957 7 0.4283423318179311 0.5997221388635887 8 0.3506487889942123 0.5610781740404022 9 0.2708621252275114 0.4875866831300998 >10 2.9728354748248105 14.407470938180852 >50 2.0044053386430267 29.917862660081983 >100 1.1025417292414794 28.831065572743636 >500 0.0027164563701667526 0.36572908491744344 >1k 0.0013582281850833763 0.5103228122692052 >5k 3.395570462708441E-4 0.49388707623391803 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7272 0.4886417010536841 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 3121 0.20971544953087845 No Hit GGGGTTGGGGATTTAGCTCAGTGGTAGAGCGCTTGCCTAGCAAGCGCAAGG 2259 0.15179339970850828 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.719495339022058E-5 0.0 0.0 0.05261364850454271 0.0 2 6.719495339022058E-5 0.0 0.0 0.22517028881062917 0.0 3 6.719495339022058E-5 0.0 0.0 0.3382593953663704 0.0 4 6.719495339022058E-5 0.0 0.0 0.5595323768803667 0.0 5 6.719495339022058E-5 0.0 0.0 0.9840700923997804 0.0 6 6.719495339022058E-5 0.0 0.0 1.4399878511524271 0.0 7 6.719495339022058E-5 0.0 0.0 1.6914313667386325 0.0 8 6.719495339022058E-5 0.0 0.0 2.3241390478609496 0.0 9 6.719495339022058E-5 0.0 0.0 2.572290010731034 0.0 10 6.719495339022058E-5 0.0 0.0 3.0638210947804976 0.0 11 6.719495339022058E-5 0.0 0.0 3.7080863078859325 0.0 12 6.719495339022058E-5 0.0 0.0 4.189067784253131 0.0 13 6.719495339022058E-5 0.0 0.0 4.3918621535848175 0.0 14 6.719495339022058E-5 0.0 0.0 4.477132549437007 0.0 15 6.719495339022058E-5 0.0 0.0 4.615218178653911 0.0 16 6.719495339022058E-5 0.0 0.0 4.891389437087717 0.0 17 6.719495339022058E-5 0.0 0.0 5.211035830364996 0.0 18 6.719495339022058E-5 0.0 0.0 5.668230293232057 0.0 19 6.719495339022058E-5 0.0 0.0 5.8700839332162795 0.0 20 6.719495339022058E-5 0.0 0.0 6.1050646852218815 0.0 21 6.719495339022058E-5 0.0 0.0 6.388761778435392 0.0 22 6.719495339022058E-5 0.0 0.0 6.669569488653124 0.0 23 6.719495339022058E-5 0.0 0.0 6.947487815875077 0.0 24 6.719495339022058E-5 0.0 0.0 7.148938286138958 0.0 25 6.719495339022058E-5 0.0 0.0 7.330095880478993 0.0 26 6.719495339022058E-5 0.0 0.0 7.526977093912339 0.0 27 6.719495339022058E-5 0.0 0.0 7.761689066104379 0.0 28 6.719495339022058E-5 0.0 0.0 7.958704669444506 0.0 29 6.719495339022058E-5 0.0 0.0 8.213171957933271 0.0 30 6.719495339022058E-5 0.0 0.0 8.522806303155408 0.0 31 6.719495339022058E-5 0.0 0.0 8.786076130538293 0.0 32 6.719495339022058E-5 0.0 0.0 8.997538648857317 0.0 33 6.719495339022058E-5 0.0 0.0 9.224993566083214 0.0 34 6.719495339022058E-5 0.0 0.0 9.486180349911 0.0 35 6.719495339022058E-5 0.0 0.0 9.804684428980647 0.0 36 6.719495339022058E-5 0.0 0.0 10.05001320380834 0.0 37 6.719495339022058E-5 0.0 0.0 10.317180338487859 0.0 38 6.719495339022058E-5 0.0 0.0 10.644150981684671 0.0 39 6.719495339022058E-5 0.0 0.0 11.317914779328413 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCACGCG 35 1.2122473E-7 45.000004 42 TTTACGA 20 7.033957E-4 45.000004 14 CGCGAGA 20 7.033957E-4 45.000004 20 CGCTAAC 20 7.033957E-4 45.000004 31 CCATACG 35 1.2122473E-7 45.000004 1 TATTACG 20 7.033957E-4 45.000004 1 TCCGTCG 20 7.033957E-4 45.000004 14 GTAACGT 20 7.033957E-4 45.000004 24 CGCCCGA 20 7.033957E-4 45.000004 41 TGCCGAT 20 7.033957E-4 45.000004 38 ACGCAAC 25 3.8913626E-5 45.0 44 TTACGTA 25 3.8913626E-5 45.0 43 TCGAACA 25 3.8913626E-5 45.0 37 AACACGA 25 3.8913626E-5 45.0 41 CGAGTAC 30 2.1659362E-6 44.999996 9 ACGATTC 30 2.1659362E-6 44.999996 10 ACTACGG 60 0.0 44.999996 2 TTTACGG 165 0.0 43.636364 2 CGTAAGG 180 0.0 42.5 2 CGTTTTT 3370 0.0 42.062313 1 >>END_MODULE