##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547849_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1378269 Sequences flagged as poor quality 0 Sequence length 51 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.520367939785338 31.0 31.0 33.0 30.0 34.0 2 31.92995199050403 31.0 31.0 34.0 30.0 34.0 3 32.01710696533115 33.0 31.0 34.0 30.0 34.0 4 35.76661304868643 37.0 35.0 37.0 35.0 37.0 5 35.69181270129416 37.0 35.0 37.0 33.0 37.0 6 35.71972670066584 37.0 35.0 37.0 33.0 37.0 7 36.01760904438829 37.0 35.0 37.0 35.0 37.0 8 36.03971866159654 37.0 35.0 37.0 35.0 37.0 9 37.82887883279679 39.0 38.0 39.0 35.0 39.0 10 37.39422057667988 39.0 37.0 39.0 35.0 39.0 11 37.05317829828575 39.0 37.0 39.0 33.0 39.0 12 36.04699227799508 37.0 35.0 39.0 32.0 39.0 13 35.6309160258266 37.0 35.0 39.0 31.0 39.0 14 36.577063693662126 38.0 35.0 41.0 31.0 41.0 15 36.89563430651056 38.0 35.0 41.0 32.0 41.0 16 37.08785077513896 38.0 35.0 41.0 33.0 41.0 17 37.0410543950419 38.0 35.0 41.0 33.0 41.0 18 36.98308748147132 38.0 35.0 41.0 32.0 41.0 19 36.88961226001601 38.0 35.0 41.0 32.0 41.0 20 36.725281494396235 38.0 35.0 41.0 32.0 41.0 21 36.57252902009695 38.0 35.0 40.0 32.0 41.0 22 36.44340691113273 37.0 35.0 40.0 31.0 41.0 23 36.39206279761063 37.0 35.0 40.0 32.0 41.0 24 36.37783045254591 37.0 35.0 40.0 32.0 41.0 25 36.3231154440824 37.0 35.0 40.0 32.0 41.0 26 36.207736660985624 37.0 35.0 40.0 31.0 41.0 27 36.10635006664156 37.0 35.0 40.0 31.0 41.0 28 36.09486972427008 36.0 35.0 40.0 31.0 41.0 29 36.13663370503146 36.0 35.0 40.0 31.0 41.0 30 36.080191892874325 36.0 35.0 40.0 31.0 41.0 31 35.907985306206555 36.0 35.0 40.0 31.0 41.0 32 35.709771459707795 36.0 35.0 40.0 30.0 41.0 33 35.6190924993597 36.0 35.0 40.0 30.0 41.0 34 35.53364256179309 36.0 35.0 40.0 30.0 41.0 35 35.455768794045284 36.0 35.0 40.0 30.0 41.0 36 35.276006352896275 36.0 34.0 40.0 29.0 41.0 37 35.1172623051088 36.0 34.0 40.0 28.0 41.0 38 35.023587558016615 36.0 34.0 40.0 28.0 41.0 39 34.964262419019796 36.0 34.0 40.0 27.0 41.0 40 34.71434821504365 36.0 34.0 40.0 26.0 41.0 41 34.68758711107919 36.0 34.0 40.0 26.0 41.0 42 34.570401714034055 36.0 34.0 40.0 25.0 41.0 43 34.47260803224915 35.0 34.0 40.0 26.0 41.0 44 34.257993178399865 35.0 34.0 40.0 24.0 41.0 45 34.115565974421536 35.0 34.0 40.0 23.0 41.0 46 34.05623357994702 35.0 34.0 40.0 23.0 41.0 47 33.99101263976771 35.0 33.0 40.0 23.0 41.0 48 33.9354364061007 35.0 34.0 40.0 23.0 41.0 49 33.846732386783714 35.0 34.0 39.0 24.0 41.0 50 33.72248233109792 35.0 33.0 39.0 23.0 41.0 51 33.35325324737043 35.0 33.0 39.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 4.0 14 8.0 15 27.0 16 90.0 17 234.0 18 558.0 19 1047.0 20 1909.0 21 3109.0 22 4804.0 23 7470.0 24 10810.0 25 15511.0 26 19814.0 27 22790.0 28 25793.0 29 29512.0 30 34471.0 31 41793.0 32 52271.0 33 70287.0 34 139621.0 35 244557.0 36 84852.0 37 104645.0 38 162318.0 39 299919.0 40 42.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.171368578992926 24.37949340803573 30.25048085678485 13.198657156186492 2 29.57020726723158 26.82894268100059 30.234518805835435 13.366331245932397 3 29.26402610811097 25.681416327291696 31.243538090169626 13.811019474427704 4 25.03371983263064 28.85118942673745 30.947587154612055 15.167503586019857 5 24.076432104327967 32.26119139297191 29.729102228955306 13.93327427374482 6 21.125339102889203 40.73007518851545 26.74543213262433 11.399153575971019 7 87.82922637017883 4.573708035223893 5.902693886316822 1.694371708280459 8 88.58858466670874 3.5439380846554625 5.186505682127364 2.6809715665084246 9 84.84301685665136 5.4047504514721 7.022141541310151 2.7300911505663987 10 53.593456719987174 24.341619814419392 11.925248264308348 10.13967520128509 11 46.407196273006214 20.036727228139064 20.80602552912385 12.750050969730871 12 42.69645475592936 20.70096621196588 22.35884286739381 14.243736164710953 13 21.651578900780617 42.44744676111847 21.733565798838978 14.167408539261931 14 14.171761825884497 44.570834866053 26.085691544974164 15.17171176308834 15 12.241006653998603 25.85837742849908 48.00456224438045 13.896053673121866 16 14.789493197626879 20.07503615041766 46.66476573150815 18.470704920447314 17 14.969936928132316 21.220168196484142 26.606417179810325 37.20347769557322 18 19.7986024498846 25.44837038343023 33.33449420976602 21.41853295691915 19 27.049871977095908 26.279122580570263 24.799875786221705 21.871129656112124 20 29.524207538586445 24.78166453718396 24.601293361455564 21.09283456277403 21 20.86820497304953 30.027592581709378 27.959708881212592 21.1444935640285 22 22.58782574374088 25.08944190139951 24.991783171499904 27.33094918335971 23 18.341847636419306 31.700197856876994 23.72076858726417 26.237185919439526 24 19.389611171694348 25.56242649294151 37.64577161642611 17.40219071893803 25 16.68302776888982 26.69145137850449 33.955490546475325 22.67003030613037 26 15.978811102912422 36.308877294635515 25.9257082615948 21.786603340857262 27 16.680851125578535 35.90322353618923 28.558430901369764 18.85749443686247 28 13.83706663938607 31.43863788563771 37.7294998291335 16.99479564584272 29 13.967084799846766 25.99579617621814 37.402640558555696 22.6344784653794 30 16.981663231197974 32.16643485415401 31.524470186879338 19.32743172776867 31 28.666319854832402 28.51584124724564 23.81291315410852 19.004925743813438 32 28.255950035878335 29.52696462011407 24.85559785499057 17.361487489017023 33 26.57608928300644 30.078308370862295 23.446366420488307 19.899235925642962 34 18.91510292983445 30.28153430135917 27.16661261335777 23.63675015544861 35 18.877084226664024 27.467569828531296 29.735704713666202 23.919641231138478 36 28.98759240757791 25.720595906894804 26.92072447395973 18.371087211567552 37 20.907457107429682 30.915735607490262 29.436851587026915 18.739955698053137 38 20.154628740833612 32.155479082820555 23.722727566244327 23.96716461010151 39 19.56954701876049 31.265739851944723 27.846668538579916 21.318044590714873 40 23.11805605436965 26.81559260202471 25.545811448998705 24.52053989460693 41 16.76661087204312 23.471688037676245 28.994412556619935 30.767288533660704 42 22.02059249682029 25.597905778915436 24.866771290655162 27.514730433609113 43 22.439378669911317 26.600104914207606 26.280646230888166 24.679870184992918 44 19.169334868592415 31.498350467143933 26.773946160002147 22.558368504261505 45 17.467344908722463 37.165241328071666 22.108746550927286 23.25866721227859 46 22.92905086017316 32.07617671151277 25.48174558086992 19.51302684744415 47 21.583304855583343 27.46945625273441 26.883286209005647 24.063952682676604 48 22.760796332210912 24.47795024048281 30.27319050199925 22.488062925307034 49 21.52010964477907 23.233635814198824 30.830846518350192 24.415408022671915 50 18.88063941073912 30.11995481288486 28.618143482875986 22.381262293500033 51 17.487877910625574 32.51701953682481 24.51749259397113 25.47760995857848 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 903.0 1 1223.0 2 1543.0 3 4873.0 4 8203.0 5 6436.5 6 4670.0 7 4877.0 8 5084.0 9 5746.0 10 6408.0 11 6850.5 12 7293.0 13 7299.0 14 7305.0 15 6932.0 16 6559.0 17 6303.5 18 6048.0 19 6050.0 20 6052.0 21 5962.5 22 5873.0 23 6373.0 24 6873.0 25 7201.0 26 9058.0 27 10587.0 28 11985.5 29 13384.0 30 16113.5 31 18843.0 32 22502.0 33 26161.0 34 29175.0 35 32189.0 36 35422.5 37 38656.0 38 46430.0 39 54204.0 40 75197.5 41 96191.0 42 117757.0 43 139323.0 44 144868.5 45 150414.0 46 144648.0 47 138882.0 48 133441.5 49 128001.0 50 118101.0 51 108201.0 52 95049.0 53 81897.0 54 70988.5 55 60080.0 56 56244.5 57 52409.0 58 47237.5 59 42066.0 60 38626.5 61 35187.0 62 29615.5 63 24044.0 64 20689.0 65 17334.0 66 14241.5 67 11149.0 68 8936.0 69 6723.0 70 5550.5 71 4378.0 72 3707.0 73 3036.0 74 2560.0 75 1624.5 76 1165.0 77 922.0 78 679.0 79 546.5 80 414.0 81 262.5 82 111.0 83 95.0 84 79.0 85 54.0 86 29.0 87 22.5 88 16.0 89 10.0 90 4.0 91 4.5 92 5.0 93 3.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 44 0.0 45 0.0 46 0.0 47 0.0 48 0.0 49 0.0 50 0.0 51 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 51 1378269.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.059438327379237 #Duplication Level Percentage of deduplicated Percentage of total 1 80.16212794813069 15.278451338188805 2 8.213134358301383 3.130754555530493 3 2.7023358209064674 1.5451500875530373 4 1.3327244705422052 1.0160391941475324 5 0.750364926723396 0.7150767021956504 6 0.46372140935574135 0.5302961761620681 7 0.3001545448775651 0.40045439257435755 8 0.22866671540765784 0.3486607327869307 9 0.1973234434937252 0.33847866016332817 >10 2.3011544381668245 10.900094837881282 >50 1.8988932693836849 27.414620747988383 >100 1.4424655758414993 36.80607263805814 >500 0.005777565724331772 0.7267732401948584 >1k 3.851710482887849E-4 0.07869706196857457 >5k 7.703420965775698E-4 0.7703796346065499 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5417 0.39302922724083617 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATAC 5077 0.3683606030462849 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.4510955408559577E-4 0.0 0.0 0.07168411971828431 0.0 2 1.4510955408559577E-4 0.0 0.0 0.2815850897030986 0.0 3 1.4510955408559577E-4 0.0 0.0 0.4333696832766318 0.0 4 2.1766433112839365E-4 0.0 0.0 0.8257459175240828 0.0 5 2.1766433112839365E-4 0.0 0.0 1.347197100130671 0.0 6 2.1766433112839365E-4 0.0 0.0 2.0819593272430854 0.0 7 2.1766433112839365E-4 0.0 0.0 2.401853339224781 0.0 8 2.1766433112839365E-4 0.0 0.0 3.216498375861316 0.0 9 2.1766433112839365E-4 0.0 0.0 3.5020014235247254 0.0 10 2.1766433112839365E-4 0.0 0.0 4.014455813778007 0.0 11 2.1766433112839365E-4 0.0 0.0 4.646625586151905 0.0 12 2.1766433112839365E-4 0.0 0.0 5.11532944584838 0.0 13 2.1766433112839365E-4 0.0 0.0 5.2973693814487595 0.0 14 2.1766433112839365E-4 0.0 0.0 5.369706494160429 0.0 15 2.1766433112839365E-4 0.0 0.0 5.484705815773263 0.0 16 2.1766433112839365E-4 0.0 0.0 5.758237325224611 0.0 17 2.1766433112839365E-4 0.0 0.0 6.051140960146387 0.0 18 2.1766433112839365E-4 0.0 0.0 6.483930205206676 0.0 19 2.1766433112839365E-4 0.0 0.0 6.669670434436238 0.0 20 2.1766433112839365E-4 0.0 0.0 6.850331829272805 0.0 21 2.1766433112839365E-4 0.0 0.0 7.084611204343999 0.0 22 2.1766433112839365E-4 0.0 0.0 7.308442691521031 0.0 23 2.1766433112839365E-4 0.0 0.0 7.572179306071601 0.0 24 2.1766433112839365E-4 0.0 0.0 7.751752379252526 0.0 25 2.1766433112839365E-4 0.0 0.0 7.903827191934231 0.0 26 2.1766433112839365E-4 0.0 0.0 8.049952512898425 0.0 27 2.1766433112839365E-4 0.0 0.0 8.192740314118652 0.0 28 2.1766433112839365E-4 0.0 0.0 8.331900376486738 0.0 29 2.1766433112839365E-4 0.0 0.0 8.487385263689454 0.0 30 2.1766433112839365E-4 0.0 0.0 8.70359849927699 0.0 31 2.1766433112839365E-4 0.0 0.0 8.903051581367643 0.0 32 2.1766433112839365E-4 0.0 0.0 9.069782459011993 0.0 33 2.1766433112839365E-4 0.0 0.0 9.231361947486304 0.0 34 2.1766433112839365E-4 0.0 0.0 9.407452391369175 0.0 35 2.1766433112839365E-4 0.0 0.0 9.641949430771497 0.0 36 2.1766433112839365E-4 0.0 0.0 9.812598266376158 0.0 37 2.1766433112839365E-4 0.0 0.0 9.995363749746966 0.0 38 2.1766433112839365E-4 0.0 0.0 10.164634044587812 0.0 39 2.1766433112839365E-4 0.0 0.0 10.359733840055895 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GAACGGT 30 2.165818E-6 45.000004 11 ACGTCGA 30 2.165818E-6 45.000004 16 AATCGGT 30 2.165818E-6 45.000004 26 TAATCCG 30 2.165818E-6 45.000004 42 GTTTGCG 70 0.0 45.0 1 CGGGTAC 70 0.0 45.0 6 AGGTACG 50 2.1827873E-11 45.0 1 GTACCCG 25 3.8912112E-5 45.0 9 GTACCCC 20 7.0337765E-4 45.0 44 CGAACGG 75 0.0 45.0 2 CAACGAA 25 3.8912112E-5 45.0 19 TCCGATC 25 3.8912112E-5 45.0 18 CGTGATA 20 7.0337765E-4 45.0 33 TTAGACT 25 3.8912112E-5 45.0 40 CGTTGCA 20 7.0337765E-4 45.0 39 CGTCTTA 25 3.8912112E-5 45.0 37 GTTAGCG 70 0.0 45.0 1 CGTCTCA 25 3.8912112E-5 45.0 35 GTAGGTT 20 7.0337765E-4 45.0 24 CGACAGT 20 7.0337765E-4 45.0 14 >>END_MODULE