##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547848_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1588918 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02208421076481 33.0 31.0 34.0 31.0 34.0 2 32.443085798008454 34.0 31.0 34.0 31.0 34.0 3 32.56203844377117 34.0 31.0 34.0 31.0 34.0 4 36.081316971675065 37.0 35.0 37.0 35.0 37.0 5 36.04274166445342 37.0 35.0 37.0 35.0 37.0 6 36.08740853838902 37.0 35.0 37.0 35.0 37.0 7 36.327982941851 37.0 37.0 37.0 35.0 37.0 8 36.334438278123855 37.0 37.0 37.0 35.0 37.0 9 38.12181874709708 39.0 39.0 39.0 37.0 39.0 10-11 37.68754145903061 39.0 37.5 39.0 35.0 39.0 12-13 36.97620550588513 39.0 35.0 39.0 33.5 39.0 14-15 38.10577512495925 40.0 36.0 41.0 33.0 41.0 16-17 38.27870790059651 40.0 36.0 41.0 34.0 41.0 18-19 38.15291915630637 40.0 36.0 41.0 34.0 41.0 20-21 37.98964672815086 40.0 35.0 41.0 34.0 41.0 22-23 37.8063814495147 40.0 35.0 41.0 34.0 41.0 24-25 37.79372881419935 40.0 35.0 41.0 34.0 41.0 26-27 37.79395632751344 40.0 35.0 41.0 34.0 41.0 28-29 37.72689465409795 40.0 35.0 41.0 34.0 41.0 30-31 37.58605636036599 40.0 35.0 41.0 33.5 41.0 32-33 37.3317915084353 40.0 35.0 41.0 33.0 41.0 34-35 37.04951954726424 40.0 35.0 41.0 32.0 41.0 36-37 36.88868651497434 40.0 35.0 41.0 32.0 41.0 38-39 36.80605575618125 39.5 35.0 41.0 31.0 41.0 40-41 36.68201820358256 39.0 35.0 41.0 31.0 41.0 42-43 36.64574635066127 39.0 35.0 41.0 31.0 41.0 44-45 36.50783426205757 39.0 35.0 41.0 31.0 41.0 46-47 36.37814506475476 39.0 35.0 41.0 31.0 41.0 48-49 36.29301008610891 39.0 35.0 41.0 31.0 41.0 50-51 36.06987270582874 38.0 35.0 40.0 30.0 41.0 52-53 35.88993327534838 38.0 35.0 40.0 30.0 41.0 54-55 35.692722657808645 37.5 35.0 40.0 29.5 41.0 56-57 35.38704388772737 37.0 35.0 40.0 28.5 41.0 58-59 35.12136623790529 36.5 34.5 40.0 28.0 41.0 60-61 34.780778177350875 36.0 34.0 39.5 27.5 41.0 62-63 34.343585383260816 35.5 34.0 39.0 26.5 40.5 64-65 33.98165921715281 35.0 34.0 39.0 26.0 40.0 66-67 33.649865820640215 35.0 34.0 38.0 25.5 40.0 68-69 33.16791804234076 35.0 33.0 37.0 24.0 40.0 70-71 32.866439929562134 35.0 33.0 37.0 24.0 39.0 72-73 32.58802373690776 35.0 33.0 36.0 23.0 39.0 74-75 32.28355679777056 35.0 33.0 36.0 22.0 38.5 76-77 30.35047308923431 33.0 30.0 34.5 19.5 36.0 78-79 31.351711038580973 34.0 31.5 35.0 20.0 37.0 80-81 31.499480464064227 35.0 32.0 35.0 20.0 36.5 82-83 31.300622184404734 35.0 32.0 35.0 19.0 36.0 84-85 31.079047502766034 34.0 32.0 35.0 18.5 36.0 86 30.652583078547792 34.0 31.0 35.0 17.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 3.0 10 11.0 11 10.0 12 23.0 13 50.0 14 205.0 15 560.0 16 1397.0 17 3052.0 18 5965.0 19 9696.0 20 11865.0 21 12509.0 22 11431.0 23 10371.0 24 10618.0 25 11936.0 26 14467.0 27 17394.0 28 21293.0 29 26657.0 30 33603.0 31 41252.0 32 50270.0 33 65164.0 34 160673.0 35 154071.0 36 132715.0 37 251026.0 38 365170.0 39 165101.0 40 358.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.77684436830598 23.719600382146844 30.639655413306414 13.863899836240762 2 30.110490283324882 25.28922197369531 31.175177070182354 13.425110672797464 3 28.82282156788456 25.541280292626805 32.489908226856265 13.14598991263237 4 26.298965711257598 27.110461332806352 31.994665552281486 14.595907403654563 5 24.811349610237908 30.883091512589072 30.167510217644967 14.138048659528057 6 22.42475697298413 40.058706616703944 26.786781948470594 10.72975446184133 7 88.71477319786169 3.614283430611271 6.009938838882812 1.6610045326442269 8 89.57397423907338 2.6798739771341253 5.822138083903638 1.9240136998888553 9 84.71355979351986 5.760649699984518 6.9235794421109205 2.6022110643846945 10-11 38.34310518226869 29.80726506968893 19.863831865458128 11.985797882584249 12-13 29.67802617882106 24.913966611241108 28.22102839794124 17.186978811996592 14-15 17.28283020269139 31.224990842825118 34.20579287288582 17.286386081597666 16-17 23.015504890749554 27.188690668744393 30.9856141097275 18.810190330778557 18-19 25.230660109584008 28.474911858258263 28.907155687077623 17.38727234508011 20-21 26.936537945948125 27.82799364095567 28.959329556339597 16.27613885675661 22-23 22.64833679271051 24.14488979292827 31.607357963091864 21.599415451269355 24-25 20.688481092164604 27.45667177286682 32.88306885566152 18.97177827930705 26-27 18.547055291714234 33.171850277987915 28.428119009288082 19.85297542100977 28-29 17.617806582844427 28.418112199622637 34.16145452439962 19.802626693133316 30-31 22.397096640607003 28.156739366033996 30.373971469893345 19.072192523465652 32-33 25.07580630340899 27.000292022621686 28.60298643479399 19.32091523917534 34-35 19.7556450364336 28.143082273597503 30.5031788928063 21.598093797162598 36-37 22.169551858560354 29.9099764745569 29.737815293174346 18.182656373708397 38-39 20.804629313784602 30.54238796464009 27.745736406787515 20.907246314787802 40-41 21.06933775059506 26.430596166699605 28.986454933483035 23.513611149222303 42-43 20.638981999071067 26.44944547169835 28.56229836907883 24.34927416015175 44-45 20.122876070382485 29.660309720199535 28.60160184477739 21.615212364640595 46-47 20.779234674161913 28.942997687734675 28.579668680196207 21.698098957907206 48-49 21.05769460727363 26.625099596077327 31.099842786097202 21.217363010551836 50-51 19.28554525784213 29.18580442791887 29.342042824110496 22.1866074901285 52-53 21.832183913833187 25.612806954166295 30.503525040310453 22.051484091690067 54-55 21.549098191347824 26.723908974534872 30.217984817341108 21.509008016776196 56-57 22.52177267801107 25.697392816998736 29.473799151372194 22.307035353617994 58-59 22.23100877452455 28.12203021175416 28.892774831677908 20.754186182043377 60-61 23.71220541273999 28.569158383251995 27.684310958778234 20.034325245229773 62-63 22.184027117824833 25.916283911441624 30.86452541918463 21.035163551548916 64-65 20.62164315590861 29.074061719988066 29.922280444931708 20.38201467917161 66-67 19.556389945862527 29.022485741869623 26.88065085800526 24.54047345426259 68-69 18.827717981670546 31.871720252398173 26.411054566692556 22.889507199238725 70-71 19.314306968641553 29.22567432680604 29.670159190090363 21.789859514462044 72-73 21.691270411688958 29.94374159018905 27.660458248946767 20.704529749175222 74-75 20.024979262617705 31.395389818731996 26.3561429853523 22.223487933298006 76-77 22.54024436755075 28.082474992416223 27.457489939694813 21.91979070033822 78-79 18.950033922455408 28.803437307652125 29.545325812911678 22.701202956980786 80-81 17.60459004177686 28.145788517720867 30.053029797635876 24.1965916428664 82-83 19.212791346060655 27.850870844184534 30.578796388485753 22.357541421269065 84-85 17.59096441729529 27.09963635631291 29.568140080230698 25.7412591461611 86 18.850060229665722 28.184777313870192 29.504228663782524 23.46093379268156 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 551.0 1 752.5 2 2341.5 3 2572.5 4 1563.5 5 1976.0 6 2417.5 7 2594.0 8 2721.0 9 2840.5 10 2810.0 11 2788.0 12 2805.5 13 2805.5 14 2789.0 15 3001.5 16 3306.0 17 3322.0 18 3244.0 19 3438.0 20 3730.0 21 3826.0 22 4308.5 23 6081.5 24 7075.0 25 8411.0 26 11324.5 27 13460.0 28 15700.0 29 17085.0 30 19718.0 31 23710.0 32 26752.0 33 30914.0 34 35146.5 35 40653.5 36 44407.0 37 44552.0 38 48270.5 39 55168.0 40 61470.0 41 69556.0 42 75419.5 43 76175.0 44 78835.0 45 82034.5 46 87466.0 47 89753.0 48 89134.0 49 85320.5 50 79521.0 51 70061.0 52 58324.0 53 52948.5 54 46388.5 55 41824.0 56 38361.5 57 36002.0 58 33453.0 59 25514.0 60 17376.0 61 12683.5 62 9530.5 63 7312.5 64 6303.0 65 5238.5 66 3544.5 67 2463.0 68 1698.5 69 1300.0 70 870.0 71 526.0 72 418.0 73 264.5 74 145.0 75 67.5 76 50.5 77 45.0 78 33.0 79 13.0 80 11.0 81 9.0 82 8.0 83 5.5 84 4.0 85 2.5 86 1.0 87 3.5 88 4.0 89 3.5 90 3.5 91 1.5 92 1.5 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1588918.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.612973458691833 #Duplication Level Percentage of deduplicated Percentage of total 1 79.55785213854043 14.808081902851825 2 8.168286966773081 3.040722170310516 3 2.592771258317243 1.4477754784655363 4 1.2444737622473656 0.9265342842699433 5 0.7329436412375716 0.6821130270535934 6 0.48930789940967445 0.5464484966904314 7 0.3566418288216188 0.46467154258812754 8 0.28050669633921693 0.41768509551577404 9 0.23957691725590954 0.4013314921979508 >10 3.307148080782856 15.494085880478098 >50 1.5826389619866315 21.50094803452422 >100 1.4417096533157143 38.961031527920234 >500 0.004094796648470621 0.5002967672578121 >1k 0.0017061652701960922 0.37981143432800774 >5k 3.4123305403921844E-4 0.4284628655479498 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6746 0.42456564781820083 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.888077295367036E-4 0.0 0.0 0.07231336041255748 0.0 2 1.888077295367036E-4 0.0 0.0 0.2401004960608414 0.0 3 1.888077295367036E-4 0.0 0.0 0.3441335550355651 0.0 4 1.888077295367036E-4 0.0 0.0 0.5533954552720782 0.0 5 1.888077295367036E-4 0.0 0.0 0.9726744866632513 0.0 6 1.888077295367036E-4 0.0 0.0 1.292829460047655 0.0 7 1.888077295367036E-4 0.0 0.0 1.4886860114870624 0.0 8 1.888077295367036E-4 0.0 0.0 1.8588120972888469 0.0 9 1.888077295367036E-4 0.0 0.0 1.9685093881496716 0.0 10 1.888077295367036E-4 0.0 0.0 2.201623998217655 0.0 11 1.888077295367036E-4 0.0 0.0 2.583078547791642 0.0 12 1.888077295367036E-4 0.0 0.0 2.883534581394383 0.0 13 1.888077295367036E-4 0.0 0.0 2.990399756312157 0.0 14 1.888077295367036E-4 0.0 0.0 3.034958380482819 0.0 15 1.888077295367036E-4 0.0 0.0 3.1191036919463433 0.0 16 1.888077295367036E-4 0.0 0.0 3.268702349649258 0.0 17 1.888077295367036E-4 0.0 0.0 3.4634260547114453 0.0 18 1.888077295367036E-4 0.0 0.0 3.701134986198155 0.0 19 1.888077295367036E-4 0.0 0.0 3.859607607189295 0.0 20 1.888077295367036E-4 0.0 0.0 4.035135859748584 0.0 21 2.5174363938227143E-4 0.0 0.0 4.241691515861738 0.0 22 2.5174363938227143E-4 0.0 0.0 4.459260956197865 0.0 23 2.5174363938227143E-4 0.0 0.0 4.681361782042875 0.0 24 2.5174363938227143E-4 0.0 0.0 4.8428553267066015 0.0 25 2.5174363938227143E-4 0.0 0.0 4.979677994710866 0.0 26 2.5174363938227143E-4 0.0 0.0 5.126507472380576 0.0 27 2.5174363938227143E-4 0.0 0.0 5.296686172602992 0.0 28 2.5174363938227143E-4 0.0 0.0 5.465920834177724 0.0 29 2.5174363938227143E-4 0.0 0.0 5.660518667420219 0.0 30 2.5174363938227143E-4 0.0 0.0 5.866256156705381 0.0 31 2.5174363938227143E-4 0.0 0.0 6.054119847594401 0.0 32 2.5174363938227143E-4 0.0 0.0 6.2252425864645 0.0 33 2.5174363938227143E-4 0.0 0.0 6.401714877671472 0.0 34 2.5174363938227143E-4 0.0 0.0 6.579886438444275 0.0 35 2.5174363938227143E-4 0.0 0.0 6.797330006960712 0.0 36 2.5174363938227143E-4 0.0 0.0 6.982361581906681 0.0 37 2.5174363938227143E-4 0.0 0.0 7.194896149455164 0.0 38 2.5174363938227143E-4 0.0 0.0 7.414227795266968 0.0 39 2.5174363938227143E-4 0.0 0.0 7.7162572266158485 0.0 40 2.5174363938227143E-4 0.0 0.0 7.94427402798634 0.0 41 2.5174363938227143E-4 0.0 0.0 8.175815240308184 0.0 42 2.5174363938227143E-4 0.0 0.0 8.411069671310917 0.0 43 2.5174363938227143E-4 0.0 0.0 8.60755558184878 0.0 44 2.5174363938227143E-4 0.0 0.0 8.81203435293703 0.0 45 2.5174363938227143E-4 0.0 0.0 9.006569250269681 0.0 46 2.5174363938227143E-4 0.0 0.0 9.232005679336504 0.0 47 2.5174363938227143E-4 0.0 0.0 9.473239021774566 0.0 48 2.5174363938227143E-4 0.0 0.0 9.69697618127556 0.0 49 2.5174363938227143E-4 0.0 0.0 9.933300522745666 0.0 50 2.5174363938227143E-4 0.0 0.0 10.166163389174269 0.0 51 2.5174363938227143E-4 0.0 0.0 10.398082216955185 0.0 52 2.5174363938227143E-4 0.0 0.0 10.668014334282827 0.0 53 2.5174363938227143E-4 0.0 0.0 10.911387497655637 0.0 54 2.5174363938227143E-4 0.0 0.0 11.174711344449493 0.0 55 2.5174363938227143E-4 0.0 0.0 11.419594969658597 0.0 56 2.5174363938227143E-4 0.0 0.0 11.685562124665967 0.0 57 2.5174363938227143E-4 0.0 0.0 11.925914364366191 0.0 58 2.5174363938227143E-4 0.0 0.0 12.15896603852433 0.0 59 2.5174363938227143E-4 0.0 0.0 12.418513730727451 0.0 60 2.5174363938227143E-4 0.0 0.0 12.679760692496403 0.0 61 2.5174363938227143E-4 0.0 0.0 12.959888427219026 0.0 62 2.5174363938227143E-4 0.0 0.0 13.289483787080265 0.0 63 3.146795492278393E-4 0.0 0.0 13.606743708611772 0.0 64 3.146795492278393E-4 0.0 0.0 13.901535510328412 0.0 65 3.146795492278393E-4 0.0 0.0 14.179963975485204 0.0 66 3.146795492278393E-4 0.0 0.0 14.435987256736974 0.0 67 3.146795492278393E-4 0.0 0.0 14.70585643815477 0.0 68 3.146795492278393E-4 0.0 0.0 15.00901871588087 0.0 69 3.146795492278393E-4 0.0 0.0 15.404507973350418 0.0 70 3.146795492278393E-4 0.0 0.0 15.697411697771692 0.0 71 3.146795492278393E-4 0.0 0.0 15.974077957452808 0.0 72 3.776154590734072E-4 0.0 0.0 16.255779089921568 0.0 73 3.776154590734072E-4 0.0 0.0 16.544403172473345 0.0 74 4.4055136891897503E-4 0.0 0.0 16.88029212331914 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGATC 675 0.0 72.888885 6 CGTAAGG 380 0.0 72.63158 2 CGTTTTT 4665 0.0 71.08253 1 ATAGCGG 380 0.0 69.47369 2 GAGCGTA 35 1.1817792E-7 68.57143 9 CGAGGGA 1065 0.0 66.478874 4 GTAGGGT 1165 0.0 65.5794 4 TACGGGA 680 0.0 64.70588 4 CGAGGGT 180 0.0 64.44444 4 TAGGGAT 3115 0.0 64.33387 5 TTCGCGA 25 1.2356718E-4 64.0 1 TAGGGTA 1135 0.0 63.436127 5 CGTTTGG 405 0.0 63.209873 2 ATAGGGA 2655 0.0 63.12618 4 CCGATCC 1315 0.0 62.96578 80 TTTGCGG 420 0.0 62.85714 2 TTAGGGA 2465 0.0 62.79919 4 AGCGGGA 1375 0.0 62.545456 4 ACGGGAC 535 0.0 62.056072 5 TAGGGAC 2285 0.0 61.79431 5 >>END_MODULE