##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547847_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1776781 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06288563418902 33.0 31.0 34.0 31.0 34.0 2 32.49073633723008 34.0 31.0 34.0 31.0 34.0 3 32.585867363507376 34.0 31.0 34.0 31.0 34.0 4 36.122248605765144 37.0 35.0 37.0 35.0 37.0 5 36.088565219911736 37.0 35.0 37.0 35.0 37.0 6 36.14605739255429 37.0 36.0 37.0 35.0 37.0 7 36.3749775577294 37.0 37.0 37.0 35.0 37.0 8 36.38720810274311 37.0 37.0 37.0 35.0 37.0 9 38.1996745800411 39.0 39.0 39.0 37.0 39.0 10-11 37.73457167765751 39.0 37.5 39.0 35.0 39.0 12-13 37.22092846557904 39.0 37.0 39.0 34.5 39.0 14-15 38.479836288208844 40.0 37.5 41.0 34.0 41.0 16-17 38.58969056963126 40.0 37.5 41.0 35.0 41.0 18-19 38.437438828983424 40.0 37.0 41.0 34.0 41.0 20-21 38.23342550376214 40.0 36.0 41.0 34.0 41.0 22-23 38.03978599501008 40.0 35.0 41.0 34.0 41.0 24-25 38.02428380312486 40.0 35.0 41.0 34.0 41.0 26-27 38.004941520648856 40.0 35.0 41.0 34.0 41.0 28-29 37.93375942223605 40.0 36.0 41.0 34.0 41.0 30-31 37.765024502175564 40.0 35.5 41.0 33.5 41.0 32-33 37.425044504640695 40.0 35.0 41.0 33.0 41.0 34-35 37.112162106641165 40.0 35.0 41.0 32.5 41.0 36-37 36.90804381631726 40.0 35.0 41.0 31.5 41.0 38-39 36.813133132333135 40.0 35.0 41.0 31.0 41.0 40-41 36.72050410264405 40.0 35.0 41.0 31.0 41.0 42-43 36.666976402831864 40.0 35.0 41.0 31.0 41.0 44-45 36.53646847867013 39.5 35.0 41.0 31.0 41.0 46-47 36.41268479345513 39.0 35.0 41.0 30.0 41.0 48-49 36.30493319097852 39.0 35.0 41.0 30.0 41.0 50-51 36.081454045265005 39.0 35.0 40.5 30.0 41.0 52-53 35.91077347180097 38.5 35.0 40.0 29.0 41.0 54-55 35.72835397271808 38.0 35.0 40.0 29.0 41.0 56-57 35.464923082811 38.0 35.0 40.0 28.5 41.0 58-59 35.205367178059646 37.0 35.0 40.0 28.0 41.0 60-61 34.85097685083305 36.5 34.0 40.0 27.0 41.0 62-63 34.50047923745245 36.0 34.0 39.0 26.5 41.0 64-65 34.1532231603107 35.5 34.0 39.0 26.0 40.0 66-67 33.836605918230774 35.0 34.0 38.5 26.0 40.0 68-69 33.371573649200435 35.0 33.5 37.5 24.0 40.0 70-71 33.0582623857414 35.0 33.0 37.0 24.0 39.5 72-73 32.78807517640047 35.0 33.0 37.0 24.0 39.0 74-75 32.464475925845676 35.0 33.0 36.0 23.0 38.5 76-77 30.49464171442626 33.0 30.0 34.5 19.5 36.0 78-79 31.52634680357343 34.5 31.5 35.0 20.0 37.0 80-81 31.646054297068687 35.0 32.0 35.0 20.0 37.0 82-83 31.43744417573128 35.0 32.0 35.0 19.5 36.0 84-85 31.201444353580996 34.5 32.0 35.0 19.0 36.0 86 30.75511388291523 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 2.0 10 10.0 11 12.0 12 27.0 13 62.0 14 220.0 15 693.0 16 1775.0 17 4317.0 18 9973.0 19 15033.0 20 16898.0 21 16097.0 22 13387.0 23 11442.0 24 10790.0 25 11661.0 26 13423.0 27 16384.0 28 20162.0 29 25496.0 30 32183.0 31 40814.0 32 50376.0 33 65586.0 34 154725.0 35 154472.0 36 149741.0 37 284618.0 38 447196.0 39 208699.0 40 506.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.486547863805388 23.429505380798197 30.818598352863972 14.265348402532446 2 31.78067527736958 24.839921183308466 30.95986505934046 12.419538479981494 3 28.71366814480794 24.800017559845585 33.636165627615334 12.850148667731137 4 25.71014660782617 27.311300604857884 33.373668448728345 13.604884338587592 5 23.74423184399203 31.084416143576505 31.67081367934484 13.50053833308663 6 21.889079183084466 40.30918835804751 27.380470637630637 10.421261821237394 7 88.30142825705587 3.1840727698011175 7.161884329019727 1.352614644123277 8 89.5738979649152 2.3464343664188214 6.8422050888657635 1.2374625798002117 9 85.38142854971997 5.189891157098145 7.738882844875087 1.6897974483067975 10-11 35.414437682528124 30.94779266550014 21.683961050911734 11.953808601060006 12-13 26.635584239138083 25.148456675302132 30.74422227612745 17.47173680943234 14-15 17.422040195161927 31.70582080740395 33.50657734408461 17.365561653349513 16-17 21.968239192112026 27.713038354192214 31.948760145454052 18.369962308241703 18-19 23.379471077189592 28.710094265978757 30.5045754091247 17.40585924770695 20-21 25.716590846029984 28.08258305328569 30.42665359433718 15.774172506347153 22-23 22.341132643809225 24.384884800096355 32.401460844077015 20.872521712017406 24-25 19.64291040933013 28.499713808285883 33.732941763785185 18.124434018598805 26-27 19.060227456281893 32.7748608297815 29.852272170852796 18.312639543083815 28-29 17.89652185609819 28.593450740412013 34.915473544573025 18.594553858916772 30-31 21.692543988257416 28.473374039907 31.46350056647386 18.37058140536172 32-33 23.17888361030425 28.39826630293773 29.93610354905866 18.486746537699357 34-35 20.062489412032207 28.49101830782747 30.757448441873255 20.689043838267068 36-37 21.914152616445133 29.137468264237405 30.138660870416782 18.80971824890068 38-39 19.72167644746314 31.101188047373313 29.067510289675543 20.10962521548801 40-41 20.872409148904676 28.312071099364527 29.655624412913017 21.159895338817783 42-43 20.937808317400965 27.37304147219044 29.42019866263766 22.26895154777094 44-45 19.730006117805175 30.571691165090126 29.071478139399286 20.626824577705413 46-47 21.157615935784996 29.91007332923979 28.55464460729825 20.37766612767696 48-49 21.045277949280187 27.94272338571833 30.828926018456976 20.18307264654451 50-51 19.316927634863273 30.309897505657702 29.766048826501407 20.607126032977614 52-53 21.241278469321767 27.628616019644515 30.73589260578541 20.39421290524831 54-55 21.20598993348083 28.206768307405362 30.2818130090315 20.30542875008231 56-57 21.438657887494294 27.290729696006427 30.011295708362486 21.259316708136794 58-59 22.537358290076266 28.201787389667043 29.20691970479198 20.05393461546471 60-61 22.2141333118713 29.62483840158129 28.328477173044963 19.832551113502454 62-63 21.801279955154858 28.18594413155026 29.924959800898364 20.08781611239652 64-65 20.249119052938994 30.347071473636877 29.547197994575587 19.856611478848546 66-67 19.149602567789728 29.95768752592469 27.545403738558665 23.347306167726916 68-69 19.07837825820965 30.933947402634317 27.50164482848477 22.486029510671266 70-71 19.638013913926365 30.119750267478096 29.13074261825177 21.111493200343766 72-73 21.495108288528524 29.91755877623635 28.094571024791463 20.49276191044366 74-75 20.60380542115207 30.959639933114996 27.05398132915649 21.38257331657644 76-77 22.63714548951165 29.404270982186326 27.644825107877676 20.313758420424353 78-79 19.56510115765533 29.485935520472133 29.6984265365287 21.250536785343833 80-81 18.189608060869627 29.332568279377142 29.828211805506697 22.64961185424653 82-83 19.30538991580842 29.158883396434337 29.7613774573231 21.77434923043414 84-85 18.383413600212968 28.554982296636446 29.180551795634912 23.88105230751567 86 19.08518832652983 28.814412130701534 30.029193243286596 22.07120629948204 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 710.0 1 795.5 2 4148.0 3 4767.5 4 2296.0 5 2779.0 6 3317.0 7 3548.0 8 3767.0 9 4007.0 10 4156.5 11 4365.0 12 4272.5 13 4238.5 14 4377.0 15 4426.0 16 4522.5 17 4731.5 18 5112.5 19 5388.0 20 6130.5 21 6817.0 22 6993.5 23 7784.0 24 9574.0 25 11937.5 26 13920.0 27 16300.5 28 20639.5 29 23393.0 30 25577.5 31 30870.5 32 35534.0 33 38738.5 34 43639.0 35 48761.0 36 50632.0 37 52301.5 38 56752.5 39 64194.5 40 72114.5 41 78579.0 42 86099.0 43 90414.0 44 91636.0 45 93416.5 46 95362.0 47 97963.0 48 99037.0 49 90314.0 50 81731.0 51 74067.5 52 61746.0 53 54143.0 54 47008.5 55 40371.5 56 35607.0 57 33290.0 58 29334.5 59 21444.5 60 14942.5 61 10951.0 62 8191.0 63 5903.0 64 4951.0 65 3987.5 66 2541.0 67 1760.5 68 1205.0 69 759.5 70 427.0 71 282.0 72 245.0 73 183.5 74 136.5 75 78.0 76 29.5 77 35.0 78 32.5 79 12.0 80 8.5 81 6.0 82 7.5 83 4.0 84 1.5 85 1.5 86 0.0 87 0.5 88 1.0 89 1.0 90 1.0 91 1.0 92 0.5 93 0.0 94 0.5 95 0.5 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1776781.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 20.35603618431716 #Duplication Level Percentage of deduplicated Percentage of total 1 78.97626484563222 16.076437048999047 2 7.456391039370187 3.035651316036755 3 2.558355966420165 1.5623395987443771 4 1.2739532594355565 1.0373055458479588 5 0.8230723214893734 0.8377244979273805 6 0.6190721745609541 0.7561113351640013 7 0.496619984348802 0.7076450059881463 8 0.40431995478316757 0.6584281303686108 9 0.32475589859456394 0.594966854057524 >10 4.424765875872267 21.832334825146603 >50 1.6596294743558684 24.350601729929984 >100 0.9800150714115407 27.435564622719 >500 0.002227306980230288 0.28410639531878823 >1k 2.78413372528786E-4 0.058034101098431906 >5k 0.0 0.0 >10k+ 2.78413372528786E-4 0.7727489926534366 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13635 0.7673990210386086 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.628155636513448E-5 0.0 0.0 0.026564894604343473 0.0 2 5.628155636513448E-5 0.0 0.0 0.09427160691160025 0.0 3 5.628155636513448E-5 0.0 0.0 0.1425049007165205 0.0 4 5.628155636513448E-5 0.0 0.0 0.22794030327879464 0.0 5 5.628155636513448E-5 0.0 0.0 0.45452984920482603 0.0 6 5.628155636513448E-5 0.0 0.0 0.6479132768754281 0.0 7 5.628155636513448E-5 0.0 0.0 0.773421147569678 0.0 8 5.628155636513448E-5 0.0 0.0 0.9973091787901829 0.0 9 5.628155636513448E-5 0.0 0.0 1.074358629454052 0.0 10 5.628155636513448E-5 0.0 0.0 1.2221539964688952 0.0 11 5.628155636513448E-5 0.0 0.0 1.475252155442905 0.0 12 5.628155636513448E-5 0.0 0.0 1.6656526606261548 0.0 13 5.628155636513448E-5 0.0 0.0 1.7388186839008297 0.0 14 5.628155636513448E-5 0.0 0.0 1.771180578810782 0.0 15 5.628155636513448E-5 0.0 0.0 1.8198078435102583 0.0 16 5.628155636513448E-5 0.0 0.0 1.922690528545724 0.0 17 5.628155636513448E-5 0.0 0.0 2.0735813811606496 0.0 18 5.628155636513448E-5 0.0 0.0 2.2540200508672705 0.0 19 5.628155636513448E-5 0.0 0.0 2.369678649197622 0.0 20 5.628155636513448E-5 0.0 0.0 2.4941734518772996 0.0 21 5.628155636513448E-5 0.0 0.0 2.651705528143311 0.0 22 5.628155636513448E-5 0.0 0.0 2.840811557530163 0.0 23 5.628155636513448E-5 0.0 0.0 3.0507980443284795 0.0 24 5.628155636513448E-5 0.0 0.0 3.2015200522743097 0.0 25 5.628155636513448E-5 0.0 0.0 3.3377777002343003 0.0 26 5.628155636513448E-5 0.0 0.0 3.4639609496049317 0.0 27 1.1256311273026895E-4 0.0 0.0 3.6004437237903826 0.0 28 1.1256311273026895E-4 0.0 0.0 3.7531355862089923 0.0 29 1.1256311273026895E-4 0.0 0.0 3.9134817402932605 0.0 30 1.1256311273026895E-4 0.0 0.0 4.098929468516379 0.0 31 1.1256311273026895E-4 0.0 0.0 4.268787205626355 0.0 32 1.1256311273026895E-4 0.0 0.0 4.433579602663468 0.0 33 1.1256311273026895E-4 0.0 0.0 4.60174889308249 0.0 34 1.1256311273026895E-4 0.0 0.0 4.778585543181743 0.0 35 1.1256311273026895E-4 0.0 0.0 4.974276514663315 0.0 36 1.1256311273026895E-4 0.0 0.0 5.155615689271778 0.0 37 1.1256311273026895E-4 0.0 0.0 5.3482674567096335 0.0 38 1.1256311273026895E-4 0.0 0.0 5.549980554722276 0.0 39 1.1256311273026895E-4 0.0 0.0 5.791991247092354 0.0 40 1.1256311273026895E-4 0.0 0.0 6.011264190690918 0.0 41 1.1256311273026895E-4 0.0 0.0 6.221081832820139 0.0 42 1.1256311273026895E-4 0.0 0.0 6.443281417349691 0.0 43 1.1256311273026895E-4 0.0 0.0 6.649778447653369 0.0 44 1.1256311273026895E-4 0.0 0.0 6.863085546277229 0.0 45 1.1256311273026895E-4 0.0 0.0 7.072284091286433 0.0 46 1.1256311273026895E-4 0.0 0.0 7.292570102899569 0.0 47 1.1256311273026895E-4 0.0 0.0 7.523887299560272 0.0 48 1.1256311273026895E-4 0.0 0.0 7.750251719260843 0.0 49 1.1256311273026895E-4 0.0 0.0 7.985733751092566 0.0 50 1.1256311273026895E-4 0.0 0.0 8.22791328813174 0.0 51 1.1256311273026895E-4 0.0 0.0 8.45889279545425 0.0 52 1.1256311273026895E-4 0.0 0.0 8.71570553714836 0.0 53 1.1256311273026895E-4 0.0 0.0 8.959798647103948 0.0 54 1.1256311273026895E-4 0.0 0.0 9.202991252157695 0.0 55 1.1256311273026895E-4 0.0 0.0 9.448716527247871 0.0 56 1.1256311273026895E-4 0.0 0.0 9.698831763734528 0.0 57 1.6884466909540343E-4 0.0 0.0 9.954856563639526 0.0 58 2.251262254605379E-4 0.0 0.0 10.209305479966298 0.0 59 2.251262254605379E-4 0.0 0.0 10.474729299784272 0.0 60 2.251262254605379E-4 0.0 0.0 10.741841566293202 0.0 61 2.8140778182567236E-4 0.0 0.0 11.01762119248236 0.0 62 2.8140778182567236E-4 0.0 0.0 11.30482597461364 0.0 63 2.8140778182567236E-4 0.0 0.0 11.593831766548607 0.0 64 2.8140778182567236E-4 0.0 0.0 11.87788478152344 0.0 65 2.8140778182567236E-4 0.0 0.0 12.152426213472566 0.0 66 2.8140778182567236E-4 0.0 0.0 12.425448043399834 0.0 67 2.8140778182567236E-4 0.0 0.0 12.701621640483548 0.0 68 2.8140778182567236E-4 0.0 0.0 12.99158421887672 0.0 69 2.8140778182567236E-4 0.0 0.0 13.331187129983944 0.0 70 2.8140778182567236E-4 0.0 0.0 13.615859242078793 5.628155636513448E-5 71 2.8140778182567236E-4 0.0 0.0 13.91133741299575 5.628155636513448E-5 72 3.3768933819080686E-4 0.0 0.0 14.203269845861701 5.628155636513448E-5 73 3.3768933819080686E-4 0.0 0.0 14.493119861142144 5.628155636513448E-5 74 3.3768933819080686E-4 0.0 0.0 14.800473440452144 5.628155636513448E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 8055 0.0 75.28243 1 TATAGCG 110 0.0 69.09091 1 ACGGGAT 1105 0.0 68.4163 5 CGAGGGA 1310 0.0 67.48091 4 TAACGGG 495 0.0 66.26262 3 GTACGGG 850 0.0 65.882355 3 TACGGGA 845 0.0 65.79882 4 CGAAGGG 970 0.0 65.15464 3 CGTTAGG 335 0.0 64.477615 2 CGCGAGG 230 0.0 64.347824 2 CGAGGGT 230 0.0 64.347824 4 TAGGGTA 815 0.0 64.29448 5 TCGCGCG 75 0.0 64.0 1 AGGGATT 3880 0.0 63.71134 6 CGGGATT 875 0.0 63.54286 6 CGGGATC 795 0.0 63.396225 6 TAGGGAT 3930 0.0 63.307888 5 GCGAGGG 1485 0.0 62.49158 3 TAGGGAC 2025 0.0 62.419754 5 CGATAGG 485 0.0 61.85567 2 >>END_MODULE