##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547843_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2288077 Sequences flagged as poor quality 0 Sequence length 86 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06559219816466 33.0 31.0 34.0 31.0 34.0 2 32.496065910369275 34.0 31.0 34.0 31.0 34.0 3 32.56824136600298 34.0 31.0 34.0 31.0 34.0 4 36.12434065811596 37.0 35.0 37.0 35.0 37.0 5 36.09295360252299 37.0 35.0 37.0 35.0 37.0 6 36.14483909413888 37.0 36.0 37.0 35.0 37.0 7 36.35889001987258 37.0 37.0 37.0 35.0 37.0 8 36.36028682601154 37.0 37.0 37.0 35.0 37.0 9 38.14481593058276 39.0 39.0 39.0 37.0 39.0 10-11 37.76009723448992 39.0 37.5 39.0 35.0 39.0 12-13 37.17007884787094 39.0 37.0 39.0 34.5 39.0 14-15 38.401507903798695 40.0 37.0 41.0 34.0 41.0 16-17 38.51973447571913 40.0 37.0 41.0 34.5 41.0 18-19 38.335740230770206 40.0 37.0 41.0 34.0 41.0 20-21 38.12986188838924 40.0 35.0 41.0 34.0 41.0 22-23 37.93193869786725 40.0 35.0 41.0 34.0 41.0 24-25 37.8641072831028 40.0 35.0 41.0 34.0 41.0 26-27 37.81001338678725 40.0 35.0 41.0 34.0 41.0 28-29 37.70660843144702 40.0 35.0 41.0 34.0 41.0 30-31 37.53314333390004 40.0 35.0 41.0 33.0 41.0 32-33 37.17302171211895 40.0 35.0 41.0 33.0 41.0 34-35 36.82318558335231 40.0 35.0 41.0 31.5 41.0 36-37 36.61978049689762 40.0 35.0 41.0 31.0 41.0 38-39 36.52552754999067 39.0 35.0 41.0 31.0 41.0 40-41 36.404679125746206 39.0 35.0 41.0 31.0 41.0 42-43 36.340265865178495 39.0 35.0 41.0 30.5 41.0 44-45 36.197161415459355 39.0 35.0 41.0 30.0 41.0 46-47 36.05395819284054 39.0 35.0 41.0 30.0 41.0 48-49 35.9314310663496 38.0 35.0 41.0 29.5 41.0 50-51 35.70879410963879 38.0 35.0 40.0 29.0 41.0 52-53 35.533134811459576 38.0 35.0 40.0 28.0 41.0 54-55 35.33852291684239 37.5 35.0 40.0 28.0 41.0 56-57 35.06350660401726 37.0 34.5 40.0 27.5 41.0 58-59 34.79171964055406 36.5 34.0 40.0 26.5 41.0 60-61 34.42354431253843 36.0 34.0 39.5 26.0 41.0 62-63 34.007274667766865 35.5 33.5 39.0 25.5 40.5 64-65 33.61976454463726 35.0 33.0 39.0 24.5 40.0 66-67 33.26924727620617 35.0 33.0 38.0 22.5 40.0 68-69 32.81016460547438 35.0 33.0 37.0 21.0 40.0 70-71 32.497506858379325 35.0 33.0 37.0 20.0 39.0 72-73 32.22013135921562 35.0 33.0 36.0 19.0 39.0 74-75 31.894699347967745 35.0 32.5 36.0 18.5 38.5 76-77 29.96281331441206 33.0 29.5 34.5 16.0 36.0 78-79 30.98319680675082 34.0 31.0 35.0 17.0 37.0 80-81 31.125670595875924 35.0 32.0 35.0 16.5 36.5 82-83 30.93716579468261 35.0 32.0 35.0 15.0 36.0 84-85 30.691744639712738 34.0 31.0 35.0 12.0 36.0 86 30.2722679350389 34.0 31.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 9.0 10 9.0 11 16.0 12 37.0 13 95.0 14 289.0 15 952.0 16 2686.0 17 6468.0 18 13828.0 19 21252.0 20 23620.0 21 22378.0 22 18843.0 23 16139.0 24 15687.0 25 17226.0 26 20191.0 27 24427.0 28 29385.0 29 37085.0 30 47216.0 31 59220.0 32 71204.0 33 89693.0 34 217681.0 35 224493.0 36 192500.0 37 349001.0 38 520089.0 39 245728.0 40 627.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.059303074153537 24.443102220773163 29.6035491812557 15.8940455238176 2 33.47417940917198 24.52950665558895 29.167156524889677 12.82915741034939 3 28.321118563754627 24.654371334531135 34.07660668762459 12.947903414089648 4 27.0147377033203 25.4906194153431 33.47321790306882 14.021424978267778 5 23.402796321976925 31.05808939122241 31.606322689315085 13.932791597485576 6 21.71705759902311 39.845555896938784 28.346511065842627 10.09087543819548 7 86.21969452951103 3.5090165234823827 8.757878340632768 1.513410606373824 8 86.58095859536196 3.2460446042681257 8.410774637392011 1.7622221629779067 9 81.83754305471363 6.316352115772328 9.540456898959256 2.3056479305547843 10-11 35.53234878022025 30.639266073650496 22.19604060527683 11.632344540852428 12-13 27.211387553827954 26.718921609718553 29.859812410159275 16.209878426294217 14-15 16.14381858652484 32.87006949503885 34.25955507616221 16.7265568422741 16-17 20.569128573907257 28.70320797770355 32.88956184603927 17.83810160234992 18-19 22.08981603328909 31.046048712521472 30.049600603476197 16.81453465071324 20-21 25.128568662680493 29.246917826629087 29.71536797057092 15.909145540119498 22-23 21.378454483830744 26.90364004358245 31.75786916261996 19.960036309966842 24-25 19.1223241175887 29.782585988146376 33.29689079519614 17.798199099068782 26-27 18.03612815477801 34.81923903784707 29.23867946751792 17.905953339857007 28-29 16.698323526699497 29.54620845364907 34.56546698384713 19.1900010358043 30-31 21.094635364107063 29.59212037007496 30.66157738572609 18.651666880091884 32-33 23.1889049188467 29.296151309593167 29.369094658964713 18.145849112595425 34-35 18.841170992060142 29.5475195983352 30.748287754301973 20.863021655302685 36-37 20.883344397937655 31.176813542551233 29.851836279985335 18.088005779525776 38-39 19.270352352652466 32.176561365723266 29.038380264300546 19.514706017323718 40-41 19.556356713519694 28.723006262464068 30.094835095147587 21.62580192886865 42-43 19.975048916623 29.204830082204403 28.182159079436573 22.637961921736025 44-45 18.976022223028334 31.43056374413973 28.73887111316621 20.85454291966573 46-47 20.29909832579935 30.72092853518479 28.439121585506083 20.540851553509782 48-49 19.93296117219831 28.700869769679954 30.866793381516445 20.49937567660529 50-51 18.459278249814144 31.175393135807926 30.390782303217946 19.974546311159983 52-53 20.42654158929092 27.933566046946844 30.49814320060033 21.141749163161904 54-55 19.811439912205753 28.696149648809893 30.658649162593743 20.83376127639061 56-57 20.793989887578086 28.307329692138854 29.7824767260892 21.116203694193857 58-59 21.495321180187553 29.76241621239145 28.76588069370043 19.976381913720562 60-61 21.922841757510785 31.537553150527714 27.393527403142464 19.146077688819037 62-63 21.644004987594386 29.247748218263638 29.843466806405555 19.26477998773643 64-65 19.73919584000014 31.8193399959879 29.19720359061343 19.244260573398535 66-67 18.25644416687026 30.998366750769314 27.499424188958677 23.245764893401752 68-69 17.79699721643983 33.37090491272802 26.879864619940676 21.95223325089147 70-71 18.458032662362324 31.443565928943823 28.990873121839865 21.107528286853984 72-73 20.65594820454032 31.597188381335066 27.7493720709574 19.99749134316721 74-75 19.571107091238627 32.62654622200215 26.555793358352886 21.246553328406343 76-77 21.799616009426256 30.242076643399674 27.80848284389031 20.14982450328376 78-79 18.152514098083238 30.365673882478607 29.435941185545765 22.04587083389239 80-81 16.965884452315198 30.12343990171659 30.186571518353624 22.724104127614588 82-83 18.496471054077286 29.56421484067188 30.356911065492987 21.582403039757843 84-85 17.206588764276727 29.18358953828914 29.089580464293814 24.520241233140318 86 17.847388877209987 29.416361424899602 29.99077391189195 22.74547578599846 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1011.0 1 1366.5 2 11245.0 3 12461.5 4 4664.0 5 6808.5 6 9892.5 7 11341.0 8 11754.5 9 11321.5 10 9693.5 11 8567.5 12 7899.0 13 7660.5 14 7746.0 15 7522.5 16 7279.5 17 7502.0 18 7651.5 19 7962.0 20 8420.0 21 8475.0 22 8973.0 23 10070.5 24 12420.5 25 15748.0 26 18854.0 27 22924.0 28 29484.5 29 33504.0 30 35007.5 31 39249.0 32 46626.0 33 51075.0 34 54730.0 35 63066.5 36 67558.0 37 71413.0 38 77831.0 39 79766.5 40 86861.5 41 97550.0 42 103029.5 43 105543.0 44 109678.5 45 112911.5 46 114280.5 47 119704.5 48 120365.5 49 111294.5 50 104715.0 51 91878.5 52 73153.0 53 62894.5 54 55218.0 55 49046.0 56 44147.5 57 42114.0 58 38959.0 59 30408.0 60 21167.5 61 16246.0 62 13017.5 63 9448.5 64 8031.0 65 6238.5 66 3844.0 67 2722.0 68 2129.5 69 1598.0 70 940.0 71 741.0 72 540.5 73 395.0 74 366.0 75 221.0 76 124.0 77 64.5 78 71.0 79 101.0 80 70.5 81 29.0 82 14.0 83 8.5 84 6.5 85 7.0 86 8.0 87 5.0 88 1.5 89 2.0 90 1.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2288077.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.772771830630962 #Duplication Level Percentage of deduplicated Percentage of total 1 78.98934259974237 14.828489056765019 2 8.302230815031297 3.1171176955163173 3 2.858141972393992 1.6096574132190584 4 1.5154171151958837 1.1379431892722127 5 0.91112451525464 0.8552166317084797 6 0.6147555466738894 0.6924399365594237 7 0.44196905812602355 0.5807888999079099 8 0.33893095718430705 0.5090138820446678 9 0.27207507283654714 0.4596842936846519 >10 3.116611434433839 13.782942605586381 >50 1.1761678102672792 15.963771891666969 >100 1.455492369903776 43.70983148448323 >500 0.00562962396818304 0.7266631376529972 >1k 0.0018765413227276803 0.5256000006681719 >5k 0.0 0.0 >10k+ 2.3456766534096004E-4 1.5008398812645196 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34083 1.4895914779091788 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.3704822870908626E-5 0.0 0.0 0.03601277404562871 0.0 2 4.3704822870908626E-5 0.0 0.0 0.1387628126151349 0.0 3 4.3704822870908626E-5 0.0 0.0 0.22822658503188487 0.0 4 4.3704822870908626E-5 0.0 0.0 0.3767792779701033 0.0 5 4.3704822870908626E-5 0.0 0.0 0.7644410568350628 0.0 6 4.3704822870908626E-5 0.0 0.0 1.1306874724932772 0.0 7 4.3704822870908626E-5 0.0 0.0 1.3953201749766289 0.0 8 4.3704822870908626E-5 0.0 0.0 1.8029987627164645 0.0 9 4.3704822870908626E-5 0.0 0.0 1.9629147096011192 0.0 10 4.3704822870908626E-5 0.0 0.0 2.1852411435454315 0.0 11 4.3704822870908626E-5 0.0 0.0 2.539031684685437 0.0 12 4.3704822870908626E-5 0.0 0.0 2.8002554109848576 0.0 13 4.3704822870908626E-5 0.0 0.0 2.9001209312448837 0.0 14 4.3704822870908626E-5 0.0 0.0 2.940853826160571 0.0 15 4.3704822870908626E-5 0.0 0.0 2.999068650224621 0.0 16 4.3704822870908626E-5 0.0 0.0 3.123321461646614 0.0 17 4.3704822870908626E-5 0.0 0.0 3.277818010495276 0.0 18 4.3704822870908626E-5 0.0 0.0 3.4588433868265795 0.0 19 4.3704822870908626E-5 0.0 0.0 3.57335002274836 0.0 20 4.3704822870908626E-5 0.0 0.0 3.698782864387868 0.0 21 4.3704822870908626E-5 0.0 0.0 3.8520556781961446 0.0 22 4.3704822870908626E-5 0.0 0.0 4.017828071345501 0.0 23 4.3704822870908626E-5 0.0 0.0 4.193652573755166 0.0 24 4.3704822870908626E-5 0.0 0.0 4.32703969315718 0.0 25 4.3704822870908626E-5 0.0 0.0 4.438312172186513 0.0 26 4.3704822870908626E-5 0.0 0.0 4.545563807511723 0.0 27 4.3704822870908626E-5 0.0 0.0 4.655962190083638 0.0 28 4.3704822870908626E-5 0.0 0.0 4.77724307355041 0.0 29 4.3704822870908626E-5 0.0 0.0 4.916137000634157 0.0 30 4.3704822870908626E-5 0.0 0.0 5.075615899290103 0.0 31 4.3704822870908626E-5 0.0 0.0 5.223950068113966 0.0 32 4.3704822870908626E-5 0.0 0.0 5.355632699424014 0.0 33 4.3704822870908626E-5 0.0 0.0 5.491510993729669 0.0 34 4.3704822870908626E-5 0.0 0.0 5.632808686071317 0.0 35 4.3704822870908626E-5 0.0 0.0 5.7955654464425805 0.0 36 4.3704822870908626E-5 0.0 0.0 5.944118139380799 0.0 37 4.3704822870908626E-5 0.0 0.0 6.096822790491753 0.0 38 4.3704822870908626E-5 0.0 0.0 6.258006177239665 0.0 39 4.3704822870908626E-5 0.0 0.0 6.46896935723754 0.0 40 8.740964574181725E-5 0.0 0.0 6.652485908472486 0.0 41 8.740964574181725E-5 0.0 0.0 6.838187700850977 0.0 42 8.740964574181725E-5 0.0 0.0 7.0241080173438215 0.0 43 8.740964574181725E-5 0.0 0.0 7.200107339044971 8.740964574181725E-5 44 8.740964574181725E-5 0.0 0.0 7.361771478844462 8.740964574181725E-5 45 8.740964574181725E-5 0.0 0.0 7.531215077114974 8.740964574181725E-5 46 8.740964574181725E-5 0.0 0.0 7.715518315161597 8.740964574181725E-5 47 8.740964574181725E-5 0.0 0.0 7.910878873394558 8.740964574181725E-5 48 8.740964574181725E-5 0.0 0.0 8.101169672174494 8.740964574181725E-5 49 8.740964574181725E-5 0.0 0.0 8.297010983459035 8.740964574181725E-5 50 8.740964574181725E-5 0.0 0.0 8.489661842674002 8.740964574181725E-5 51 8.740964574181725E-5 0.0 0.0 8.691315895400374 8.740964574181725E-5 52 8.740964574181725E-5 0.0 0.0 8.905906575696534 8.740964574181725E-5 53 1.3111446861272587E-4 0.0 0.0 9.10913400204626 8.740964574181725E-5 54 1.3111446861272587E-4 0.0 0.0 9.314852603299627 8.740964574181725E-5 55 1.3111446861272587E-4 0.0 0.0 9.526733584577793 8.740964574181725E-5 56 1.3111446861272587E-4 0.0 0.0 9.738352336918732 8.740964574181725E-5 57 1.3111446861272587E-4 0.0 0.0 9.940967895748264 8.740964574181725E-5 58 1.3111446861272587E-4 0.0 0.0 10.135935110575387 8.740964574181725E-5 59 1.3111446861272587E-4 0.0 0.0 10.345150097658427 8.740964574181725E-5 60 1.3111446861272587E-4 0.0 0.0 10.570492164380832 8.740964574181725E-5 61 1.3111446861272587E-4 0.0 0.0 10.800466942327553 8.740964574181725E-5 62 1.3111446861272587E-4 0.0 0.0 11.064793711050807 8.740964574181725E-5 63 1.748192914836345E-4 0.0 0.0 11.320685448959978 8.740964574181725E-5 64 1.748192914836345E-4 0.0 0.0 11.571201493656027 8.740964574181725E-5 65 1.748192914836345E-4 0.0 0.0 11.812277296611958 8.740964574181725E-5 66 2.1852411435454314E-4 0.0 0.0 12.047977406354768 8.740964574181725E-5 67 2.1852411435454314E-4 0.0 0.0 12.296483029198756 8.740964574181725E-5 68 2.1852411435454314E-4 0.0 0.0 12.54966506808993 8.740964574181725E-5 69 2.1852411435454314E-4 0.0 0.0 12.828938886235035 8.740964574181725E-5 70 2.1852411435454314E-4 0.0 0.0 13.08312613605224 8.740964574181725E-5 71 2.1852411435454314E-4 0.0 0.0 13.329053174346843 8.740964574181725E-5 72 2.1852411435454314E-4 0.0 0.0 13.571483826811772 8.740964574181725E-5 73 2.1852411435454314E-4 0.0 0.0 13.815793786660151 8.740964574181725E-5 74 2.6222893722545174E-4 0.0 0.0 14.081825043475373 8.740964574181725E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12700 0.0 75.71654 1 TAACGGG 760 0.0 70.0 3 GGGCGAT 1490 0.0 67.919464 7 CGAGGGA 1935 0.0 67.80362 4 TACGGGA 1190 0.0 66.55462 4 GTAGGGA 3690 0.0 65.149055 4 GTAGGGT 2155 0.0 64.77958 4 GCGAGGG 2070 0.0 64.34783 3 AGGGATT 5115 0.0 64.281525 6 GTTTGCG 200 0.0 64.0 1 GCGCGAC 95 0.0 63.157894 9 ACGGGAT 1440 0.0 63.055553 5 CCGATCC 1670 0.0 62.994015 80 TACGCGG 115 0.0 62.608696 2 CGAAGGG 1265 0.0 62.608692 3 GTACGGG 895 0.0 62.122906 3 TTACGGG 730 0.0 61.917812 3 ATAGGGA 3725 0.0 61.85235 4 AGGGTAA 2290 0.0 61.65939 6 TAGGGTA 2235 0.0 61.565994 5 >>END_MODULE