##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547838_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1298728 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.968255862659465 33.0 31.0 34.0 30.0 34.0 2 32.38923700728713 33.0 31.0 34.0 31.0 34.0 3 32.50913817211918 34.0 31.0 34.0 31.0 34.0 4 36.05121472702521 37.0 35.0 37.0 35.0 37.0 5 35.99696934231032 37.0 35.0 37.0 35.0 37.0 6 36.05812687491145 37.0 35.0 37.0 35.0 37.0 7 36.299229707837206 37.0 36.0 37.0 35.0 37.0 8 36.31115137272778 37.0 37.0 37.0 35.0 37.0 9 38.15021775152303 39.0 39.0 39.0 37.0 39.0 10-11 37.62644449030128 39.0 37.5 39.0 35.0 39.0 12-13 36.77927017820514 39.0 35.0 39.0 33.5 39.0 14-15 37.7950575486168 40.0 35.0 41.0 33.0 41.0 16-17 38.036493014703616 40.0 35.0 41.0 34.0 41.0 18-19 37.94254955618113 40.0 36.0 41.0 34.0 41.0 20-21 37.73055404980873 40.0 35.0 41.0 33.5 41.0 22-23 37.54293970715962 39.5 35.0 41.0 33.0 41.0 24-25 37.52778295378247 39.0 35.0 41.0 33.0 41.0 26-27 37.50532482552159 39.0 35.0 41.0 33.0 41.0 28-29 37.47677573749084 39.0 35.0 41.0 33.0 41.0 30-31 37.36660216765944 39.0 35.0 41.0 33.0 41.0 32-33 37.053347968165774 39.0 35.0 41.0 32.5 41.0 34-35 36.78149466246974 39.0 35.0 41.0 32.0 41.0 36-37 36.59033107779304 39.0 35.0 41.0 31.0 41.0 38-39 36.512242363297005 39.0 35.0 41.0 31.0 41.0 40-41 36.39697765813935 39.0 35.0 41.0 31.0 41.0 42-43 36.36527471495186 39.0 35.0 41.0 31.0 41.0 44-45 36.22793263870494 38.5 35.0 41.0 30.5 41.0 46-47 36.10393785303774 38.0 35.0 41.0 30.0 41.0 48-49 36.046453529915425 38.0 35.0 40.0 30.0 41.0 50-51 35.836450357580645 38.0 35.0 40.0 30.0 41.0 52-53 35.65152402966595 37.0 35.0 40.0 29.5 41.0 54-55 35.45385138381555 37.0 35.0 40.0 29.0 41.0 56-57 35.11870961433033 36.5 34.5 40.0 28.5 41.0 58-59 34.83296733419161 36.0 34.0 39.5 28.0 41.0 60-61 34.44811769670015 35.5 34.0 39.0 27.5 40.5 62-63 33.953948786812944 35.0 33.5 39.0 26.0 40.0 64-65 33.52381753531148 35.0 33.0 38.0 25.5 40.0 66-67 33.223291944117626 35.0 33.0 37.0 24.5 40.0 68-69 32.75647633684652 35.0 33.0 37.0 23.0 39.5 70-71 32.45737521636555 35.0 33.0 36.0 21.5 39.0 72-73 32.17260812117703 35.0 33.0 36.0 20.0 38.5 74-75 31.89326094455498 35.0 32.5 35.0 20.0 37.5 76-77 29.983876531498513 33.0 29.5 34.5 18.0 35.5 78-79 30.92658970931558 34.0 31.0 35.0 18.0 36.0 80-81 31.144644991098986 34.5 32.0 35.0 18.0 36.0 82-83 30.948382571254335 34.5 31.5 35.0 17.5 36.0 84-85 30.749841768253244 34.0 31.0 35.0 15.0 35.5 86 30.390157908353405 34.0 31.0 35.0 15.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 4.0 10 1.0 11 6.0 12 14.0 13 37.0 14 140.0 15 438.0 16 1146.0 17 2407.0 18 5218.0 19 8379.0 20 10218.0 21 10692.0 22 9498.0 23 8680.0 24 9156.0 25 10445.0 26 12667.0 27 15251.0 28 19095.0 29 24016.0 30 30341.0 31 38127.0 32 45735.0 33 58105.0 34 151786.0 35 138635.0 36 107085.0 37 199448.0 38 271792.0 39 109938.0 40 227.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.31766466881441 24.360836141208935 31.65389519591477 13.667603994061883 2 29.056353601369956 25.25779069982321 32.323781423053944 13.362074275752892 3 28.240093383680033 24.879651474365687 33.993877085887114 12.886378056067166 4 25.926290955457954 26.571460690768202 32.84251975779378 14.659728595980068 5 22.843120345445698 31.97443960552171 31.17943095089965 14.003009098132942 6 20.816830005975078 40.86175088240186 27.82068300675738 10.500736104865684 7 88.26875219445488 3.260805957829507 6.508214191116231 1.9622276565993801 8 89.60967962498691 2.3321280514472624 6.216544187851498 1.8416481357143295 9 86.40608349092342 3.614151693041191 7.456526693811175 2.523238122224207 10-11 40.69832174250497 25.31985142385473 20.04934828539925 13.932478548241049 12-13 29.996042281370695 26.467012338226326 26.253033737626353 17.283911642776626 14-15 16.118078612303734 31.396835981052227 35.43701991487055 17.04806549177349 16-17 21.169906246727567 24.733508479065673 32.254559846249556 21.8420254279572 18-19 24.768581257969334 27.231067629249544 29.27341213864643 18.72693897413469 20-21 25.965252154415708 27.66899612543966 28.625855452411898 17.739896267732735 22-23 22.01534886442735 23.92795104132659 30.966568827344908 23.090131266901153 24-25 19.98590158986331 26.485992447995272 34.08265626058728 19.445449701554136 26-27 17.806923389655108 32.93226141270536 29.393722165072283 19.86709303256725 28-29 16.549924233557757 28.588665217043136 35.258768579718 19.602641969681102 30-31 22.75022175544071 27.576790521186883 30.684485126985788 18.98850259638662 32-33 25.518738334739837 27.73063335817816 27.249008260390166 19.50162004669184 34-35 19.541774721111736 27.42591212324675 29.98814994363716 23.044163212004364 36-37 22.785756524845848 27.358076517946788 30.255488447157525 19.600678510049832 38-39 19.594287641446094 29.76608650926137 28.351856585828592 22.287769263463943 40-41 20.876888771166865 25.198232424341356 29.071098798208713 24.85378000628307 42-43 21.346194122248846 25.586342944789052 28.18400003695924 24.883462896002857 44-45 20.128271662734615 29.98718746342575 27.485123905852493 22.399416967987136 46-47 21.52583142890582 28.068540910798873 28.522870069791367 21.88275759050394 48-49 20.92847771049827 26.06692856394873 31.196178106578127 21.808415618974873 50-51 18.918819029080762 29.325501567687766 29.317185738661212 22.438493664570256 52-53 22.595185442987294 24.451617274748834 30.482518279424177 22.470679002839702 54-55 22.376586937372565 25.674621629779292 30.33933972317529 21.60945170967285 56-57 22.281455393277113 23.460031661749035 30.572105937501924 23.686407007471928 58-59 23.68190260008254 25.657412483599334 28.707165780671552 21.95351913564657 60-61 24.18377828151853 28.482060908827716 26.729345944647378 20.604814865006375 62-63 23.64494335996452 25.779377975988815 30.007515045490663 20.568163618556 64-65 19.98262915714453 29.608971239551312 30.198047628140767 20.21035197516339 66-67 18.46283440412465 29.40669639832205 26.14046205210021 25.990007145453088 68-69 18.1415970087655 31.701287721524444 26.0514518821493 24.105663387560753 70-71 19.263386944764417 29.636575172014464 28.888689548542885 22.211348334678238 72-73 22.98949433599645 28.621851534732446 27.553152007194733 20.83550212207637 74-75 21.488102204618674 30.542076554906032 25.197038948879214 22.772782291596087 76-77 25.640395833461664 27.781529311757353 26.4149999076019 20.163074947179087 78-79 18.616561743490553 28.927111758582242 30.105380033386513 22.350946464540687 80-81 16.82681054077528 28.21610837681177 30.409485280982622 24.547595801430322 82-83 18.908578239631392 27.038417590134344 31.277642431671605 22.775361738562655 84-85 16.910161327083113 26.228971732341183 30.129673033922423 26.731193906653278 86 17.840533198637438 26.263621019951827 31.457934224872336 24.437911556538396 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 767.0 1 782.5 2 2655.0 3 2861.5 4 1314.0 5 1683.0 6 2098.0 7 2247.0 8 2356.5 9 2386.5 10 2303.5 11 2266.5 12 2277.5 13 2346.5 14 2371.0 15 2414.5 16 2505.0 17 2630.5 18 2889.5 19 2988.5 20 3229.5 21 3552.0 22 3371.0 23 3578.0 24 4520.0 25 5181.5 26 6005.5 27 7366.0 28 10236.0 29 12462.0 30 13948.5 31 16525.0 32 18400.5 33 20759.0 34 23246.5 35 25136.5 36 26112.0 37 28393.0 38 33928.0 39 39085.5 40 46767.0 41 58580.5 42 66114.5 43 67613.0 44 70196.0 45 72979.0 46 77782.5 47 83602.5 48 85170.0 49 80074.0 50 74627.0 51 62793.0 52 48857.5 53 41800.5 54 37598.0 55 36363.0 56 33028.0 57 31681.0 58 27942.5 59 20834.0 60 14649.0 61 9821.0 62 6772.5 63 4760.0 64 3783.0 65 3352.0 66 2320.5 67 1514.0 68 1067.0 69 645.0 70 464.5 71 465.0 72 320.0 73 167.5 74 119.0 75 58.0 76 38.5 77 28.0 78 27.5 79 38.0 80 25.0 81 11.5 82 9.5 83 7.0 84 3.5 85 1.5 86 2.0 87 2.5 88 1.5 89 1.0 90 1.0 91 1.5 92 1.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1298728.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.76926336556374 #Duplication Level Percentage of deduplicated Percentage of total 1 78.79823905342782 14.789849015364373 2 8.89603914871005 3.339442033850088 3 2.90779231065229 1.637313590729819 4 1.409480990161448 1.058196796523831 5 0.8652622453584325 0.8120167481705727 6 0.5537502433984614 0.6236090494254448 7 0.4278282000835503 0.5621014113808279 8 0.3265433115606817 0.4903181931956617 9 0.2656369904272192 0.44872295696677916 >10 2.8050858987078144 12.540623554633187 >50 1.2337138101147755 16.985104339789924 >100 1.4982286636294693 44.29758466669341 >500 0.00950600255544215 1.1353760263061368 >1k 0.0024798267535936043 0.6883934720853141 >5k 4.133044589322674E-4 0.591348144884646 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7623 0.5869589321243555 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 1697 0.13066631350059443 No Hit GCTCAACTTGACCCTGCATTAGAAATTGAAGACTGTAAATACAAAATAAA 1647 0.12681639265496703 No Hit TGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 1532 0.11796157471002397 No Hit GAGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 1529 0.1177305794592863 No Hit TCAGATAGGGCTGTCATCTCAGACTCAAAAAAGTGAATACCAGAACTCGC 1447 0.11141670927245735 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.699841691254828E-5 0.0 0.0 0.07615143432651025 0.0 2 7.699841691254828E-5 0.0 0.0 0.29051502701104465 0.0 3 7.699841691254828E-5 0.0 0.0 0.41694642758144895 0.0 4 7.699841691254828E-5 0.0 0.0 0.6844389279356417 0.0 5 7.699841691254828E-5 0.0 0.0 1.2305886990963466 0.0 6 7.699841691254828E-5 0.0 0.0 1.6258985715253695 0.0 7 7.699841691254828E-5 0.0 0.0 1.8916971067074861 0.0 8 7.699841691254828E-5 0.0 0.0 2.399193672578092 0.0 9 7.699841691254828E-5 0.0 0.0 2.5402547723618802 0.0 10 7.699841691254828E-5 0.0 0.0 2.906074251113397 0.0 11 7.699841691254828E-5 0.0 0.0 3.3703747050960633 0.0 12 7.699841691254828E-5 0.0 0.0 3.7780043242310937 0.0 13 7.699841691254828E-5 0.0 0.0 3.937160051989331 0.0 14 7.699841691254828E-5 0.0 0.0 3.989518975489864 0.0 15 7.699841691254828E-5 0.0 0.0 4.1023216562667475 0.0 16 7.699841691254828E-5 0.0 0.0 4.297743638390795 0.0 17 7.699841691254828E-5 0.0 0.0 4.52997086379904 0.0 18 7.699841691254828E-5 0.0 0.0 4.8254907879094 0.0 19 7.699841691254828E-5 0.0 0.0 5.0069760565722765 0.0 20 7.699841691254828E-5 0.0 0.0 5.201397059276461 0.0 21 1.5399683382509656E-4 0.0 0.0 5.475126431400571 0.0 22 1.5399683382509656E-4 0.0 0.0 5.753167714871783 0.0 23 1.5399683382509656E-4 0.0 0.0 6.023586155068652 0.0 24 1.5399683382509656E-4 0.0 0.0 6.225706999464091 0.0 25 1.5399683382509656E-4 0.0 0.0 6.43475770138166 0.0 26 1.5399683382509656E-4 0.0 0.0 6.599688310408338 0.0 27 1.5399683382509656E-4 0.0 0.0 6.786332473004355 0.0 28 1.5399683382509656E-4 0.0 0.0 6.980522480457802 0.0 29 1.5399683382509656E-4 0.0 0.0 7.218370590300664 0.0 30 1.5399683382509656E-4 0.0 0.0 7.455525714391312 0.0 31 1.5399683382509656E-4 0.0 0.0 7.684596004706143 0.0 32 1.5399683382509656E-4 0.0 0.0 7.892722725620761 0.0 33 1.5399683382509656E-4 0.0 0.0 8.094458577931638 0.0 34 1.5399683382509656E-4 0.0 0.0 8.331767698856112 0.0 35 1.5399683382509656E-4 0.0 0.0 8.5918683511867 0.0 36 1.5399683382509656E-4 0.0 0.0 8.801612038856481 0.0 37 1.5399683382509656E-4 0.0 0.0 9.026755409908771 0.0 38 1.5399683382509656E-4 0.0 0.0 9.290397989417338 0.0 39 1.5399683382509656E-4 0.0 0.0 9.712811304599578 0.0 40 1.5399683382509656E-4 0.0 0.0 9.969293031335276 0.0 41 1.5399683382509656E-4 0.0 0.0 10.22084685938857 0.0 42 1.5399683382509656E-4 0.0 0.0 10.472631682692604 0.0 43 1.5399683382509656E-4 0.0 0.0 10.746669048484364 0.0 44 1.5399683382509656E-4 0.0 0.0 10.9843631614934 0.0 45 1.5399683382509656E-4 0.0 0.0 11.20373165127725 0.0 46 1.5399683382509656E-4 0.0 0.0 11.442888734207624 0.0 47 1.5399683382509656E-4 0.0 0.0 11.700602435613924 0.0 48 1.5399683382509656E-4 0.0 0.0 11.951925268416481 0.0 49 1.5399683382509656E-4 0.0 0.0 12.215336852674309 0.0 50 1.5399683382509656E-4 0.0 0.0 12.469431628485719 0.0 51 1.5399683382509656E-4 0.0 0.0 12.726529342556717 0.0 52 1.5399683382509656E-4 0.0 0.0 13.050692677758546 0.0 53 2.3099525073764485E-4 0.0 0.0 13.339359742763689 0.0 54 2.3099525073764485E-4 0.0 0.0 13.630413758693122 0.0 55 2.3099525073764485E-4 0.0 0.0 13.908301045330507 0.0 56 2.3099525073764485E-4 0.0 0.0 14.191578221151772 0.0 57 2.3099525073764485E-4 0.0 0.0 14.471390468211974 0.0 58 2.3099525073764485E-4 0.0 0.0 14.743040883079443 0.0 59 2.3099525073764485E-4 0.0 0.0 15.007761440424785 0.0 60 2.3099525073764485E-4 0.0 0.0 15.308517256885198 0.0 61 2.3099525073764485E-4 0.0 0.0 15.597646312391817 0.0 62 2.3099525073764485E-4 0.0 0.0 15.935669362637904 0.0 63 2.3099525073764485E-4 0.0 0.0 16.293942996531992 0.0 64 2.3099525073764485E-4 0.0 0.0 16.616874357063217 0.0 65 2.3099525073764485E-4 0.0 0.0 16.91970913078027 0.0 66 2.3099525073764485E-4 0.0 0.0 17.183197713455012 0.0 67 2.3099525073764485E-4 0.0 0.0 17.46809185603144 0.0 68 2.3099525073764485E-4 0.0 0.0 17.82382454216741 0.0 69 3.079936676501931E-4 0.0 0.0 18.324699244183538 0.0 70 3.079936676501931E-4 0.0 0.0 18.65648542265971 0.0 71 3.079936676501931E-4 0.0 0.0 18.97533586709457 0.0 72 3.079936676501931E-4 0.0 0.0 19.283252536327854 0.0 73 3.079936676501931E-4 0.0 0.0 19.592093186564085 0.0 74 3.079936676501931E-4 0.0 0.0 19.93589111807861 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATATCG 15 0.0013098295 80.0 1 CTCGCGG 30 4.06053E-8 80.0 2 CGTTTTT 4305 0.0 71.823456 1 ATTCGCG 45 1.1823431E-10 71.111115 1 GCGTAAG 170 0.0 68.23529 1 TAGGGCG 260 0.0 67.69231 5 TAGGGTA 1260 0.0 67.61905 5 CGAGGGA 635 0.0 66.77165 4 AGGGATT 1420 0.0 66.76057 6 GTAGGGT 1255 0.0 65.65737 4 TCGATTG 165 0.0 65.454544 1 ATCGTAG 55 9.094947E-12 65.454544 1 TCGATAG 135 0.0 65.18518 1 ACGGGTA 160 0.0 65.0 5 AGTAGGG 2735 0.0 64.93602 3 CGTAGGG 760 0.0 64.73684 3 TTGTACG 155 0.0 64.51613 1 ATAGCCG 25 1.2355868E-4 64.0 1 CGCGCGG 50 3.0013325E-10 64.0 2 CTTTACG 25 1.2355868E-4 64.0 1 >>END_MODULE