##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547836_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2595271 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.07856173786861 33.0 31.0 34.0 31.0 34.0 2 32.528025011646186 34.0 31.0 34.0 31.0 34.0 3 32.6605961381297 34.0 31.0 34.0 31.0 34.0 4 36.170258905524705 37.0 35.0 37.0 35.0 37.0 5 36.142291113336526 37.0 35.0 37.0 35.0 37.0 6 36.20142328103693 37.0 37.0 37.0 35.0 37.0 7 36.39331923332862 37.0 37.0 37.0 35.0 37.0 8 36.394727949412605 37.0 37.0 37.0 35.0 37.0 9 38.19825020200203 39.0 39.0 39.0 37.0 39.0 10-11 37.77743210631954 39.0 37.5 39.0 35.0 39.0 12-13 37.341277461968325 39.0 37.0 39.0 34.5 39.0 14-15 38.59959441615153 40.0 38.0 41.0 34.5 41.0 16-17 38.70199470498457 40.0 38.0 41.0 35.0 41.0 18-19 38.576356765825224 40.0 37.5 41.0 35.0 41.0 20-21 38.45012177918992 40.0 37.0 41.0 34.0 41.0 22-23 38.27322734311754 40.0 36.5 41.0 34.0 41.0 24-25 38.25483119103939 40.0 36.0 41.0 34.0 41.0 26-27 38.263321055874314 40.0 36.0 41.0 34.0 41.0 28-29 38.18139936060627 40.0 36.0 41.0 34.0 41.0 30-31 38.05290950347767 40.0 36.0 41.0 34.0 41.0 32-33 37.79363812102859 40.0 36.0 41.0 33.5 41.0 34-35 37.53380417690484 40.0 36.0 41.0 33.0 41.0 36-37 37.37099247053583 40.0 36.0 41.0 33.0 41.0 38-39 37.27857919269317 40.0 35.0 41.0 33.0 41.0 40-41 37.18297607456023 40.0 35.0 41.0 32.0 41.0 42-43 37.13172689865529 40.0 35.0 41.0 32.0 41.0 44-45 37.00712411150897 40.0 35.0 41.0 32.0 41.0 46-47 36.887489398987626 40.0 35.0 41.0 32.0 41.0 48-49 36.77352211002243 39.0 35.0 41.0 31.0 41.0 50-51 36.56494119496577 39.0 35.0 41.0 31.0 41.0 52-53 36.37909509257415 39.0 35.0 40.5 31.0 41.0 54-55 36.19490951041337 38.5 35.0 40.0 31.0 41.0 56-57 35.91595232251275 38.0 35.0 40.0 30.0 41.0 58-59 35.68924805925855 37.5 35.0 40.0 30.0 41.0 60-61 35.342312228665136 37.0 35.0 40.0 29.0 41.0 62-63 35.005859889005805 36.5 34.0 39.5 28.5 41.0 64-65 34.67242804316004 36.0 34.0 39.0 28.0 40.5 66-67 34.37129629237178 35.5 34.0 39.0 28.0 40.0 68-69 33.90148832241412 35.0 34.0 38.0 26.5 40.0 70-71 33.602358096707434 35.0 34.0 37.0 26.0 39.5 72-73 33.32482523019754 35.0 34.0 37.0 26.0 39.0 74-75 33.010429161347695 35.0 33.0 36.0 26.0 39.0 76-77 31.03042668761759 33.5 30.0 34.5 23.0 36.0 78-79 32.1303553655861 34.5 32.5 35.0 25.0 37.0 80-81 32.22242166617667 35.0 33.0 35.0 25.0 37.0 82-83 32.0284669693454 35.0 33.0 35.0 24.5 36.0 84-85 31.802850646425746 35.0 33.0 35.0 24.0 36.0 86 31.364324958742266 34.0 32.0 35.0 22.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 5.0 10 7.0 11 26.0 12 33.0 13 95.0 14 284.0 15 804.0 16 2015.0 17 4543.0 18 10438.0 19 16373.0 20 19432.0 21 18883.0 22 15828.0 23 13662.0 24 12982.0 25 14439.0 26 17108.0 27 20705.0 28 25932.0 29 32908.0 30 42078.0 31 53320.0 32 67948.0 33 91605.0 34 211075.0 35 206796.0 36 226692.0 37 445335.0 38 697514.0 39 325579.0 40 820.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.616852344128993 24.428893938243828 30.56008409141088 13.394169626216298 2 30.562627178433388 25.737697527541442 31.23889566831364 12.460779625711535 3 29.652124961131225 24.14907730252448 33.4815131059531 12.717284630391202 4 27.033670086861832 27.20320922169592 31.673532359433754 14.089588332008487 5 24.21469665402958 32.2281950516921 30.251445802769727 13.305662491508594 6 22.69604985375323 41.10537974646964 25.955786505532565 10.24278389424457 7 89.50163585999304 3.258349513403417 5.789337606747041 1.4506770198565004 8 90.29434691020707 2.9080585418632583 5.528247339102545 1.2693472088271323 9 85.45446699015248 5.922233169484035 6.670517260047217 1.9527825803162753 10-11 33.926977182729665 30.895501857031498 22.65620815706722 12.521312803171615 12-13 27.705834959046665 24.836963076303014 29.139461736365874 18.317740228284446 14-15 19.52158368047113 30.394648574272203 32.26851839364752 17.81524935160914 16-17 24.185797937864677 28.574780822503698 29.744388928940367 17.495032310691254 18-19 24.270837226632594 29.690271266468898 28.701164541198203 17.337726965700305 20-21 26.579093281587934 27.99963857338983 29.232554134038413 16.188714010983823 22-23 23.061946132022438 24.35418112405217 32.3954993524761 20.188373391449293 24-25 20.884293008321674 28.94591740130414 31.481278833694056 18.68851075668013 26-27 20.262007320237462 32.34999350742177 28.903937199621925 18.48406197271884 28-29 18.886987139300672 29.2207056604108 32.845356034109734 19.04695116617879 30-31 22.236406140245084 27.8894188699369 30.712457388843017 19.161717600975003 32-33 23.304213702538192 28.456931857983232 29.151522133912028 19.087332305566548 34-35 20.854353938374835 28.552894861461482 30.21064081554489 20.382110384618795 36-37 22.315415230239925 28.89553730612333 29.63260869481453 19.156438768822216 38-39 20.99241273839996 29.95411654505445 28.45741350325265 20.596057213292948 40-41 21.45161333826024 27.910746122466595 28.86282395942466 21.7748165798485 42-43 21.36106402761022 27.977733346536837 28.552104963219644 22.109097662633307 44-45 20.911939446786096 29.47087221334497 28.579423882900862 21.037764456968077 46-47 21.57450994520418 29.091181614559712 28.717579011979865 20.61672942825624 48-49 21.3400835596745 28.233718174325535 29.97752450514802 20.44867376085195 50-51 19.903104531280164 29.694355618353534 29.605328306754863 20.79721154361144 52-53 21.722355777103814 27.347336752115677 29.72090390560369 21.209403565176814 54-55 21.569500834402263 27.70489093431861 29.97586764542123 20.749740585857893 56-57 21.611057188247393 27.697743318520494 29.001402936340753 21.68979655689136 58-59 22.45345476445427 28.109954605896647 29.077734078637647 20.358856551011435 60-61 23.086317382654837 28.98776274231092 27.961858318456915 19.964061556577327 62-63 22.495878079784344 27.33375435551817 29.656401971123632 20.51396559357385 64-65 21.625776267680717 29.31713104334769 28.625315044170723 20.43177764480087 66-67 20.902576262748667 29.196488536264614 27.522829022479733 22.378106178506986 68-69 20.178220309170026 30.367425983644868 27.76946993204178 21.68488377514333 70-71 20.984205503009125 29.20153617868808 28.886328248572113 20.927930069730674 72-73 22.037428846544348 29.421859990729292 28.011987958097635 20.528723204628726 74-75 21.021966492131263 30.288609551757794 27.17716184552596 21.512262110584984 76-77 21.991075305815848 28.818531860449255 28.05179112316209 21.138601710572807 78-79 20.20413282466455 28.95755395101321 28.978592216381255 21.859721007940983 80-81 19.557244696218625 28.576630340338255 29.25811986493896 22.608005098504165 82-83 20.281253865203286 28.700548035253355 29.368551492310434 21.649646607232924 84-85 19.24804769906495 28.147542202721798 29.101546620757524 23.502863477455726 86 20.06607402463943 28.161452118102503 29.2654986704664 22.50697518679167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 661.0 1 843.0 2 2950.5 3 3436.0 4 2204.0 5 2730.0 6 3234.5 7 3421.0 8 3540.0 9 3802.5 10 3981.0 11 4040.0 12 4223.5 13 4482.0 14 4581.0 15 4534.5 16 4849.5 17 5276.0 18 5658.5 19 6208.5 20 7077.5 21 7714.0 22 7960.0 23 10134.5 24 12944.0 25 14696.5 26 18355.5 27 23865.0 28 29660.5 29 32734.0 30 36822.0 31 44974.5 32 52025.0 33 57480.0 34 61697.5 35 69622.5 36 75799.0 37 78081.5 38 84605.0 39 92229.5 40 101761.5 41 110536.5 42 117827.0 43 122491.0 44 127241.0 45 132233.0 46 135917.0 47 141661.5 48 142996.0 49 132634.0 50 123240.0 51 113312.0 52 98840.5 53 88799.5 54 78001.5 55 68655.0 56 59448.5 57 54288.0 58 47107.5 59 34377.0 60 25411.5 61 20358.0 62 16153.0 63 11461.0 64 9336.0 65 7647.0 66 4855.0 67 3151.5 68 2020.5 69 1386.0 70 1092.0 71 902.0 72 766.0 73 460.5 74 232.0 75 137.0 76 83.5 77 59.0 78 34.5 79 17.0 80 18.0 81 13.5 82 7.5 83 5.0 84 2.5 85 4.0 86 6.0 87 4.5 88 2.0 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2595271.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.8086458716617 #Duplication Level Percentage of deduplicated Percentage of total 1 79.69906235105051 13.396333153622935 2 7.1404095419184435 2.400412307374825 3 2.258705614231865 1.1389734839387262 4 1.1220882677108737 0.7544313731479362 5 0.6939356468207026 0.5832059272565848 6 0.5103675855058536 0.5147152805485748 7 0.4114916668191603 0.4841632394692149 8 0.3268214843289551 0.43947412746689923 9 0.27281170456220344 0.41270357984674255 >10 4.0876582528877385 17.14686103822994 >50 1.8863840270846495 23.115390517125196 >100 1.585404203385361 38.56964530501626 >500 0.003471181209739502 0.3765252555208631 >1k 0.0011570604032465008 0.2674185053415221 >5k 0.0 0.0 >10k+ 2.3141208064930013E-4 0.3997469060937924 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10277 0.39598947470225654 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.706324310640392E-5 0.0 0.0 0.022540998608623145 0.0 2 7.706324310640392E-5 0.0 0.0 0.08018430445221328 0.0 3 7.706324310640392E-5 0.0 0.0 0.12152873437879898 0.0 4 7.706324310640392E-5 0.0 0.0 0.18129127940781523 0.0 5 7.706324310640392E-5 0.0 0.0 0.3248601013150457 0.0 6 7.706324310640392E-5 0.0 0.0 0.44950989703965405 0.0 7 7.706324310640392E-5 0.0 0.0 0.5280758733866329 0.0 8 7.706324310640392E-5 0.0 0.0 0.6840518774339943 0.0 9 7.706324310640392E-5 0.0 0.0 0.7378420211222643 0.0 10 7.706324310640392E-5 0.0 0.0 0.8595248819872761 0.0 11 7.706324310640392E-5 0.0 0.0 1.0484839540841784 0.0 12 7.706324310640392E-5 0.0 0.0 1.1946343946354736 0.0 13 7.706324310640392E-5 0.0 0.0 1.2469603367047217 0.0 14 7.706324310640392E-5 0.0 0.0 1.2716976377418774 0.0 15 7.706324310640392E-5 0.0 0.0 1.3093045003778025 0.0 16 7.706324310640392E-5 0.0 0.0 1.3919162969878676 0.0 17 7.706324310640392E-5 0.0 0.0 1.4998819005799395 0.0 18 1.1559486465960587E-4 0.0 0.0 1.621680356309611 0.0 19 1.1559486465960587E-4 0.0 0.0 1.7085691629120812 0.0 20 1.1559486465960587E-4 0.0 0.0 1.807749556790023 0.0 21 1.1559486465960587E-4 0.0 0.0 1.9318213781913334 0.0 22 1.1559486465960587E-4 0.0 0.0 2.071267316592371 0.0 23 1.1559486465960587E-4 0.0 0.0 2.2148361384996016 0.0 24 1.1559486465960587E-4 0.0 0.0 2.321337540472652 0.0 25 1.1559486465960587E-4 0.0 0.0 2.4157014816564435 0.0 26 1.1559486465960587E-4 0.0 0.0 2.5068672982513194 3.853162155320196E-5 27 1.1559486465960587E-4 0.0 0.0 2.612521004550199 3.853162155320196E-5 28 1.1559486465960587E-4 0.0 0.0 2.7228755686785697 3.853162155320196E-5 29 1.1559486465960587E-4 0.0 0.0 2.8463694157565818 3.853162155320196E-5 30 1.1559486465960587E-4 0.0 0.0 2.984158494430832 3.853162155320196E-5 31 1.5412648621280784E-4 0.0 0.0 3.1067275825915677 3.853162155320196E-5 32 1.5412648621280784E-4 0.0 0.0 3.2281021904841536 3.853162155320196E-5 33 1.5412648621280784E-4 0.0 0.0 3.348282318108591 3.853162155320196E-5 34 1.5412648621280784E-4 0.0 0.0 3.4765540862592 3.853162155320196E-5 35 1.5412648621280784E-4 0.0 0.0 3.6175027579008128 3.853162155320196E-5 36 1.5412648621280784E-4 0.0 0.0 3.75706429116651 3.853162155320196E-5 37 1.5412648621280784E-4 0.0 0.0 3.906605514414487 3.853162155320196E-5 38 1.5412648621280784E-4 0.0 0.0 4.062620050083401 3.853162155320196E-5 39 1.5412648621280784E-4 0.0 0.0 4.2822117613151 3.853162155320196E-5 40 1.5412648621280784E-4 0.0 0.0 4.445123457242038 3.853162155320196E-5 41 1.5412648621280784E-4 0.0 0.0 4.614855250183892 3.853162155320196E-5 42 1.5412648621280784E-4 0.0 0.0 4.784317321774874 3.853162155320196E-5 43 1.5412648621280784E-4 0.0 0.0 4.9437611717620245 3.853162155320196E-5 44 1.5412648621280784E-4 0.0 0.0 5.1001224920249175 3.853162155320196E-5 45 1.5412648621280784E-4 0.0 0.0 5.258525988230131 3.853162155320196E-5 46 1.5412648621280784E-4 0.0 0.0 5.436310890076605 3.853162155320196E-5 47 1.5412648621280784E-4 0.0 0.0 5.6162920943516115 3.853162155320196E-5 48 1.926581077660098E-4 0.0 0.0 5.798777854027575 3.853162155320196E-5 49 1.926581077660098E-4 0.0 0.0 5.981533335054412 3.853162155320196E-5 50 1.926581077660098E-4 0.0 0.0 6.169529116612485 3.853162155320196E-5 51 1.926581077660098E-4 0.0 0.0 6.364730311401006 3.853162155320196E-5 52 1.926581077660098E-4 0.0 0.0 6.579312911830788 3.853162155320196E-5 53 1.926581077660098E-4 0.0 0.0 6.77019856500535 3.853162155320196E-5 54 1.926581077660098E-4 0.0 0.0 6.968829074112106 3.853162155320196E-5 55 1.926581077660098E-4 0.0 0.0 7.166766014030904 3.853162155320196E-5 56 1.926581077660098E-4 0.0 0.0 7.366822193135129 3.853162155320196E-5 57 1.926581077660098E-4 0.0 0.0 7.573428747903398 3.853162155320196E-5 58 1.926581077660098E-4 0.0 0.0 7.776028014030134 3.853162155320196E-5 59 1.926581077660098E-4 0.0 0.0 7.9911885887832135 3.853162155320196E-5 60 1.926581077660098E-4 0.0 0.0 8.199028155441185 3.853162155320196E-5 61 1.926581077660098E-4 0.0 0.0 8.430526137732823 3.853162155320196E-5 62 1.926581077660098E-4 0.0 0.0 8.68922744484102 3.853162155320196E-5 63 1.926581077660098E-4 0.0 0.0 8.931051901708916 3.853162155320196E-5 64 1.926581077660098E-4 0.0 0.0 9.174957066140685 3.853162155320196E-5 65 1.926581077660098E-4 0.0 0.0 9.400020267632938 3.853162155320196E-5 66 2.3118972931921174E-4 0.0 0.0 9.629707263711573 3.853162155320196E-5 67 2.3118972931921174E-4 0.0 0.0 9.860742866544573 3.853162155320196E-5 68 2.3118972931921174E-4 0.0 0.0 10.128961484176411 3.853162155320196E-5 69 2.3118972931921174E-4 0.0 0.0 10.45590229305533 3.853162155320196E-5 70 2.697213508724137E-4 0.0 0.0 10.702389076131164 3.853162155320196E-5 71 2.697213508724137E-4 0.0 0.0 10.946679556778463 3.853162155320196E-5 72 2.697213508724137E-4 3.853162155320196E-5 0.0 11.202336865783959 3.853162155320196E-5 73 2.697213508724137E-4 3.853162155320196E-5 0.0 11.459766629380901 3.853162155320196E-5 74 2.697213508724137E-4 3.853162155320196E-5 0.0 11.731645751060293 3.853162155320196E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 8000 0.0 70.8 1 CGAGGGA 1920 0.0 66.041664 4 TACGGGA 1310 0.0 65.64885 4 TAACGCG 45 9.429641E-9 62.222225 1 CGTAAGG 450 0.0 62.22222 2 AGGGATT 5345 0.0 61.739944 6 ACGGGAT 1335 0.0 61.72285 5 GCGGGAT 2110 0.0 61.23223 5 CCGATCC 1775 0.0 61.070423 80 GCGGGTC 450 0.0 60.444443 5 CGGGATA 795 0.0 60.377357 6 TAGGGAC 3650 0.0 60.054794 5 CGAACGG 60 2.1827873E-11 59.999996 2 GCGATAC 120 0.0 59.999996 9 GGGCGAT 1750 0.0 59.885715 7 TAGGGTA 2285 0.0 59.5186 5 TAGGGAT 5535 0.0 59.331528 5 TAAGGGA 4045 0.0 59.23362 4 AAGGGAT 5335 0.0 59.231487 5 ATAGGGA 4195 0.0 58.92729 4 >>END_MODULE