##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547834_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1603263 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03098930119388 33.0 31.0 34.0 31.0 34.0 2 32.45315646902598 34.0 31.0 34.0 31.0 34.0 3 32.563547590133375 34.0 31.0 34.0 31.0 34.0 4 36.0783396111555 37.0 35.0 37.0 35.0 37.0 5 36.046480833150895 37.0 35.0 37.0 35.0 37.0 6 36.103434059165586 37.0 35.0 37.0 35.0 37.0 7 36.33729338230845 37.0 37.0 37.0 35.0 37.0 8 36.3340337798602 37.0 37.0 37.0 35.0 37.0 9 38.12728791221403 39.0 39.0 39.0 37.0 39.0 10-11 37.66790227180444 39.0 37.5 39.0 35.0 39.0 12-13 36.964284711865744 39.0 35.0 39.0 33.5 39.0 14-15 38.159681225101565 40.0 36.0 41.0 33.5 41.0 16-17 38.32022288295806 40.0 36.0 41.0 34.0 41.0 18-19 38.20359572945924 40.0 36.0 41.0 34.0 41.0 20-21 37.992084580009646 40.0 35.0 41.0 34.0 41.0 22-23 37.80968655797583 40.0 35.0 41.0 34.0 41.0 24-25 37.80317296663118 40.0 35.0 41.0 34.0 41.0 26-27 37.7721509197181 40.0 35.0 41.0 34.0 41.0 28-29 37.70642059350213 40.0 35.0 41.0 34.0 41.0 30-31 37.56964609050418 40.0 35.0 41.0 33.5 41.0 32-33 37.21150460030575 40.0 35.0 41.0 33.0 41.0 34-35 36.937694252284246 40.0 35.0 41.0 32.0 41.0 36-37 36.74124675739414 39.5 35.0 41.0 31.5 41.0 38-39 36.66729133024339 39.0 35.0 41.0 31.0 41.0 40-41 36.57762513074898 39.0 35.0 41.0 31.0 41.0 42-43 36.53569907120666 39.0 35.0 41.0 31.0 41.0 44-45 36.383559341168606 39.0 35.0 41.0 31.0 41.0 46-47 36.22233158252888 39.0 35.0 41.0 30.0 41.0 48-49 36.131453791424114 38.0 35.0 41.0 30.0 41.0 50-51 35.91883801971355 38.0 35.0 40.0 30.0 41.0 52-53 35.73581221546309 38.0 35.0 40.0 29.0 41.0 54-55 35.57099646159114 37.5 35.0 40.0 29.0 41.0 56-57 35.29475326256515 37.0 34.5 40.0 28.5 41.0 58-59 34.992257976389396 36.5 34.0 40.0 28.0 41.0 60-61 34.60549236151523 36.0 34.0 39.0 26.5 41.0 62-63 34.10555286312976 35.0 33.5 39.0 26.0 40.5 64-65 33.68242016437728 35.0 33.0 38.5 25.0 40.0 66-67 33.313798484715235 35.0 33.0 38.0 24.0 40.0 68-69 32.842474378813705 35.0 33.0 37.0 22.0 39.5 70-71 32.47719213878197 35.0 33.0 36.5 20.5 39.0 72-73 32.16218486923231 35.0 33.0 36.0 20.0 39.0 74-75 31.843134906749547 35.0 32.0 36.0 19.0 38.0 76-77 29.906908286413397 33.0 29.5 34.5 16.0 36.0 78-79 30.83118989211377 34.0 30.5 35.0 17.0 36.5 80-81 30.997065671695786 34.5 31.5 35.0 16.0 36.0 82-83 30.78643397870468 34.5 31.0 35.0 14.0 36.0 84-85 30.557485265985683 34.0 31.0 35.0 11.0 36.0 86 30.16275183797044 34.0 30.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 5.0 10 7.0 11 4.0 12 14.0 13 47.0 14 188.0 15 500.0 16 1350.0 17 3222.0 18 7121.0 19 11288.0 20 13267.0 21 13562.0 22 12066.0 23 11078.0 24 11042.0 25 12808.0 26 14902.0 27 18473.0 28 22579.0 29 28956.0 30 36400.0 31 45792.0 32 53481.0 33 67222.0 34 169102.0 35 160748.0 36 127431.0 37 242415.0 38 357694.0 39 160193.0 40 303.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.70683786752392 24.069163948771973 30.538782470499225 13.685215713204881 2 29.249973335628653 26.75113191036031 30.720723923648208 13.278170830362829 3 29.064850869757485 25.010681341738696 33.028080857601026 12.89638693090279 4 25.63653000162793 27.584058261183596 33.17072744771132 13.608684289477146 5 24.551305680976856 31.936744002699495 29.956657142340337 13.555293173983307 6 22.47017488708964 41.48265131796842 25.50136814733453 10.545805647607411 7 87.77624132784203 3.6073307997502595 7.062160107231315 1.5542677651763934 8 88.4808044594056 3.769001093395157 6.062012283698932 1.6881821635003114 9 84.31461338532729 5.977060532177191 7.023551344975839 2.6847747375196707 10-11 39.21873703815282 29.675480566819047 20.311733009493764 10.794049385534375 12-13 28.814236965488504 27.3528734836393 27.474344508667635 16.358545042204554 14-15 15.402744278387265 34.053240173321534 33.94645794233385 16.59755760595735 16-17 19.107220711760952 27.973825878848324 32.74144666221325 20.177506747177475 18-19 22.638020087783474 29.874512166749934 29.658982961622645 17.828484783843948 20-21 25.663475050568746 29.41516769238734 28.41467681846335 16.50668043858057 22-23 20.52311442352253 26.950756051876706 30.39523147481106 22.13089804978971 24-25 18.903199287952134 29.584790517837682 33.33445604370587 18.177554150504317 26-27 18.348424431924144 35.853880492470665 27.956143190480915 17.841551885124275 28-29 16.81071664474263 29.051004108496237 35.65905905643678 18.47922019032436 30-31 22.257202966699786 30.837735293585645 28.755325857329705 18.149735882384864 32-33 24.31347820039507 29.75790622000258 27.773796314141848 18.1548192654605 34-35 20.28594185732472 28.727070979620933 29.77964314027081 21.207344022783538 36-37 21.91203189994405 30.59392002435034 29.356880312213278 18.13716776349233 38-39 19.514702204192325 31.726984281431058 28.61773146389582 20.140582050480802 40-41 20.079113657584564 28.486249604712388 28.881100605452755 22.553536132250294 42-43 21.349242139312143 28.14469616026815 27.117728033391902 23.388333667027805 44-45 19.43732874768519 32.35227158613403 27.684603212323864 20.525796453856916 46-47 21.216855874550838 30.52047605414707 27.728919085639724 20.533748985662363 48-49 20.263456463474803 28.00064618219219 30.969747321556103 20.766150032776906 50-51 18.543869595942773 31.02466657061256 29.21959778277176 21.21186605067291 52-53 21.84254860244389 27.11648057742242 30.04313702742469 20.997833792708995 54-55 20.828117408060937 28.290180712709017 31.07646717974531 19.80523469948474 56-57 22.010923971924758 26.39379814790212 29.20665542708838 22.388622453084743 58-59 23.07503510029234 27.89807411510151 28.437567635503346 20.589323149102796 60-61 23.29720700845713 30.49792828749868 26.69643096609851 19.508433737945676 62-63 22.651617357850835 27.752589562660653 30.292784153317324 19.303008926171188 64-65 19.705407035526925 32.69295181139963 29.035473281676182 18.56616787139727 66-67 18.52674826276163 30.722906971594803 25.905325576652118 24.84501918899145 68-69 17.529594333556002 34.394294635377975 25.289363005321025 22.786748025744995 70-71 19.07035838786275 31.28404385306715 28.842523029596517 20.80307472947358 72-73 22.093973353093034 32.00968899051497 26.214445165889817 19.681892490502182 74-75 20.478798550206673 33.04096084048594 25.08253480558087 21.397705803726524 76-77 24.107679151829736 30.461564945988272 26.614909718492846 18.81584618368914 78-79 18.861565444970662 30.79061264433845 28.89120499880556 21.456616911885323 80-81 16.723862522867428 30.325841736508607 29.656051440094355 23.294244300529606 82-83 18.959958534563576 28.8096837511999 30.210264940936078 22.02009277330045 84-85 17.167083628824468 29.235222168789527 28.261114988620083 25.336579213765926 86 18.421431792538094 29.187662909953016 30.336569857846158 22.054335439662736 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 785.0 1 965.0 2 3962.5 3 4394.0 4 2119.0 5 2549.0 6 3220.5 7 3573.0 8 3768.0 9 3785.0 10 3535.5 11 3434.0 12 3243.0 13 3149.0 14 3216.0 15 3218.5 16 3249.0 17 3442.0 18 3724.0 19 3839.0 20 4328.5 21 4820.0 22 5004.0 23 5275.5 24 6912.0 25 8216.0 26 9638.0 27 13531.0 28 18538.0 29 21319.0 30 25917.0 31 31545.0 32 30732.0 33 30133.5 34 34813.5 35 42291.0 36 46333.0 37 49473.5 38 56912.5 39 62522.5 40 67945.5 41 78163.5 42 88551.0 43 92832.0 44 92219.0 45 90996.0 46 92860.0 47 95309.0 48 93740.5 49 81319.0 50 70441.0 51 59736.5 52 46311.5 53 40892.5 54 35247.5 55 31299.5 56 29264.0 57 28230.0 58 24538.0 59 17669.0 60 12264.5 61 9514.0 62 8685.0 63 6623.5 64 4868.0 65 3567.5 66 1786.0 67 1042.0 68 709.0 69 498.5 70 307.0 71 256.0 72 198.0 73 102.0 74 47.5 75 25.0 76 15.0 77 9.5 78 8.5 79 9.0 80 7.0 81 5.5 82 3.5 83 1.0 84 2.0 85 3.0 86 3.0 87 1.5 88 0.5 89 0.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1603263.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.78559809027814 #Duplication Level Percentage of deduplicated Percentage of total 1 77.99299841805303 14.65145122137243 2 9.409413405832051 3.535229170144722 3 3.203531540962313 1.805407679941422 4 1.5139205703300727 1.1375961349930162 5 0.8914106233090038 0.8372840851443634 6 0.5804851033870456 0.6542855909773556 7 0.45124224314608524 0.5933798794768547 8 0.32631163495295684 0.4903967381126242 9 0.25755829833620225 0.4354548009623863 >10 2.8830950874068395 12.860871754177818 >50 1.0216208231616257 13.893308942287206 >100 1.4573513964577796 46.51079483763452 >500 0.008044257938129289 1.076199179836412 >1k 0.002681419312709763 0.8237721664989338 >5k 0.0 0.0 >10k+ 3.351774140887204E-4 0.6945678184399402 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11031 0.6880343399679278 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCC 3074 0.19173398250941986 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 2189 0.13653405585983086 No Hit GAATCTGTCTCTTATACACATCTGACGCGAGTTCACTCGTATGCCGTCTT 1773 0.11058697169460033 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06455584642070578 0.0 2 0.0 0.0 0.0 0.2583481312797713 0.0 3 0.0 0.0 0.0 0.3728645892782407 0.0 4 0.0 0.0 0.0 0.6067002107576861 0.0 5 0.0 0.0 0.0 1.228931248335426 0.0 6 0.0 0.0 0.0 1.6065361702976992 0.0 7 0.0 0.0 0.0 1.9051771293917468 0.0 8 0.0 0.0 0.0 2.4544319927547757 0.0 9 0.0 0.0 0.0 2.604126709092644 0.0 10 0.0 0.0 0.0 3.1156460293788357 0.0 11 0.0 0.0 0.0 3.6481226099523285 0.0 12 0.0 0.0 0.0 4.107747761908059 0.0 13 0.0 0.0 0.0 4.2498953696305595 0.0 14 0.0 0.0 0.0 4.30359834911677 0.0 15 0.0 0.0 0.0 4.40021381395317 0.0 16 0.0 0.0 0.0 4.604297610560463 0.0 17 0.0 0.0 0.0 4.8693820040754385 0.0 18 0.0 0.0 0.0 5.168896182348123 0.0 19 0.0 0.0 0.0 5.392377919280866 0.0 20 0.0 0.0 0.0 5.592282738390395 0.0 21 0.0 0.0 0.0 5.838281055572292 0.0 22 0.0 0.0 0.0 6.141974211342743 0.0 23 0.0 0.0 0.0 6.433691789806164 0.0 24 0.0 0.0 0.0 6.646882014990679 0.0 25 0.0 0.0 0.0 6.83743091432909 0.0 26 0.0 0.0 0.0 7.012386614048974 0.0 27 0.0 0.0 0.0 7.194140948802536 0.0 28 0.0 0.0 0.0 7.387247132878386 0.0 29 0.0 0.0 0.0 7.603244133994235 0.0 30 0.0 0.0 0.0 7.858535998148775 0.0 31 0.0 0.0 0.0 8.08145637989525 0.0 32 0.0 0.0 0.0 8.27786832229023 0.0 33 0.0 0.0 0.0 8.482575846882265 0.0 34 0.0 0.0 0.0 8.709425714932609 0.0 35 0.0 0.0 0.0 8.965653171064261 0.0 36 0.0 0.0 0.0 9.208470475523978 0.0 37 0.0 0.0 0.0 9.44498812733781 0.0 38 0.0 0.0 0.0 9.666286816323959 0.0 39 0.0 0.0 0.0 9.917274957383786 0.0 40 0.0 0.0 0.0 10.169198690420723 0.0 41 0.0 0.0 0.0 10.433596983152484 0.0 42 6.237279847411185E-5 0.0 0.0 10.695500363945278 0.0 43 6.237279847411185E-5 0.0 0.0 10.940625461948539 0.0 44 6.237279847411185E-5 0.0 0.0 11.175708539397466 0.0 45 6.237279847411185E-5 0.0 0.0 11.423016685347319 0.0 46 6.237279847411185E-5 0.0 0.0 11.702758686503712 0.0 47 1.247455969482237E-4 0.0 0.0 11.974953579044735 0.0 48 1.247455969482237E-4 0.0 0.0 12.232366118347395 0.0 49 1.247455969482237E-4 0.0 0.0 12.499883051002861 0.0 50 1.247455969482237E-4 0.0 0.0 12.79216198465255 0.0 51 1.247455969482237E-4 0.0 0.0 13.068348736295917 0.0 52 1.247455969482237E-4 0.0 0.0 13.356760556440209 0.0 53 1.247455969482237E-4 0.0 0.0 13.62889307618276 0.0 54 1.247455969482237E-4 0.0 0.0 13.918178115505691 0.0 55 1.247455969482237E-4 0.0 0.0 14.207213663634725 0.0 56 1.247455969482237E-4 0.0 0.0 14.518142064028172 0.0 57 1.247455969482237E-4 0.0 0.0 14.807427103351102 0.0 58 1.247455969482237E-4 0.0 0.0 15.091971809990001 0.0 59 1.247455969482237E-4 0.0 0.0 15.37832532778465 0.0 60 1.8711839542233556E-4 0.0 0.0 15.673161546171777 0.0 61 1.8711839542233556E-4 0.0 0.0 15.99693874305089 0.0 62 1.8711839542233556E-4 0.0 0.0 16.33356473641567 0.0 63 1.8711839542233556E-4 0.0 0.0 16.705992716104593 0.0 64 1.8711839542233556E-4 0.0 0.0 17.037753631188394 0.0 65 1.8711839542233556E-4 0.0 0.0 17.332652222373994 0.0 66 1.8711839542233556E-4 0.0 0.0 17.62717657676875 0.0 67 1.8711839542233556E-4 0.0 0.0 17.923759233513152 0.0 68 1.8711839542233556E-4 0.0 0.0 18.262194038033684 0.0 69 1.8711839542233556E-4 0.0 0.0 18.610795608705498 0.0 70 1.8711839542233556E-4 0.0 0.0 18.912180970932404 0.0 71 2.494911938964474E-4 0.0 0.0 19.214938534725743 0.0 72 2.494911938964474E-4 0.0 0.0 19.520814738442787 0.0 73 2.494911938964474E-4 0.0 0.0 19.834612287566046 0.0 74 2.494911938964474E-4 0.0 0.0 20.17716369678587 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTATGG 125 0.0 80.0 2 GCGAACG 70 0.0 80.0 1 ATACGGT 70 0.0 74.28571 3 CGAACGG 130 0.0 73.84615 2 CGTTTTT 5610 0.0 73.440285 1 CTGCGCG 110 0.0 72.72727 1 AGTACGG 205 0.0 72.19512 2 ACGGGAT 1070 0.0 69.532715 5 GTTAGCG 75 0.0 69.333336 1 TATAGCG 110 0.0 69.090904 1 CGGGGTA 215 0.0 68.837204 6 TGTTCGG 35 1.1817792E-7 68.57143 2 CGTAACG 35 1.1817792E-7 68.57143 80 CGTAAGG 345 0.0 68.4058 2 AATACGG 270 0.0 68.14815 2 TAGCGGG 1145 0.0 67.074234 3 TAGGGAC 1655 0.0 66.94865 5 CACTACG 60 0.0 66.666664 1 CCGATCC 1065 0.0 66.478874 80 CTAAGCG 85 0.0 65.882355 1 >>END_MODULE