##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547833_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 926804 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.11917298587404 33.0 31.0 34.0 31.0 34.0 2 32.53969555591042 34.0 31.0 34.0 31.0 34.0 3 32.65441668357064 34.0 31.0 34.0 31.0 34.0 4 36.16141924290357 37.0 35.0 37.0 35.0 37.0 5 36.13453437835832 37.0 35.0 37.0 35.0 37.0 6 36.18510170435173 37.0 37.0 37.0 35.0 37.0 7 36.36027898023746 37.0 37.0 37.0 35.0 37.0 8 36.35875222808706 37.0 37.0 37.0 35.0 37.0 9 38.16895697472173 39.0 39.0 39.0 37.0 39.0 10-11 37.78248583303481 39.0 37.5 39.0 35.0 39.0 12-13 36.87354985520132 39.0 35.0 39.0 33.5 39.0 14-15 37.985706794532604 40.0 35.0 41.0 33.0 41.0 16-17 38.16285805844601 40.0 35.0 41.0 34.0 41.0 18-19 38.002919711179494 40.0 36.0 41.0 34.0 41.0 20-21 37.80909070310443 40.0 35.0 41.0 34.0 41.0 22-23 37.61036583786863 39.5 35.0 41.0 34.0 41.0 24-25 37.59868213775512 39.0 35.0 41.0 34.0 41.0 26-27 37.592447809892924 39.0 35.0 41.0 34.0 41.0 28-29 37.549068627239414 39.0 35.0 41.0 34.0 41.0 30-31 37.39660057574201 39.0 35.0 41.0 33.5 41.0 32-33 37.04440744752936 39.0 35.0 41.0 33.0 41.0 34-35 36.713863988502425 39.0 35.0 41.0 32.0 41.0 36-37 36.52954346334285 39.0 35.0 41.0 31.5 41.0 38-39 36.46182148544892 39.0 35.0 41.0 31.0 41.0 40-41 36.34663531879448 39.0 35.0 41.0 31.0 41.0 42-43 36.30704766056253 38.5 35.0 41.0 31.0 41.0 44-45 36.151665832257954 38.0 35.0 41.0 31.0 41.0 46-47 36.03031601072071 38.0 35.0 41.0 31.0 41.0 48-49 35.96598957276835 38.0 35.0 40.0 31.0 41.0 50-51 35.74273093340123 37.5 35.0 40.0 30.0 41.0 52-53 35.574941951048984 37.0 35.0 40.0 30.0 41.0 54-55 35.41301181263784 37.0 35.0 40.0 29.5 41.0 56-57 35.1056890129952 36.0 34.5 40.0 28.5 41.0 58-59 34.86673665629411 36.0 34.0 39.5 28.0 41.0 60-61 34.55448778814075 35.0 34.0 39.0 27.5 41.0 62-63 34.13288678080802 35.0 33.5 39.0 26.5 40.0 64-65 33.868217012442756 35.0 34.0 38.0 26.0 40.0 66-67 33.621292635767645 35.0 34.0 37.5 26.0 40.0 68-69 33.27709148859953 35.0 33.5 37.0 25.5 39.5 70-71 33.03997555038606 35.0 33.0 36.5 25.0 39.0 72-73 32.81677085985818 35.0 33.0 36.0 25.0 39.0 74-75 32.53847793060884 35.0 33.0 35.5 25.0 38.0 76-77 30.597932788378124 33.0 30.0 34.5 20.5 36.0 78-79 31.593325557507306 34.0 31.5 35.0 22.5 36.5 80-81 31.87115614520438 35.0 33.0 35.0 23.0 36.0 82-83 31.71379007859267 35.0 32.5 35.0 22.5 36.0 84-85 31.520610075053625 35.0 32.0 35.0 20.5 36.0 86 31.145997427719344 34.0 32.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 7.0 10 10.0 11 12.0 12 17.0 13 54.0 14 93.0 15 320.0 16 853.0 17 1850.0 18 4111.0 19 6590.0 20 8068.0 21 8592.0 22 7285.0 23 6114.0 24 5515.0 25 6014.0 26 6898.0 27 8417.0 28 10492.0 29 12926.0 30 16709.0 31 21208.0 32 27050.0 33 38661.0 34 116943.0 35 106827.0 36 77898.0 37 139854.0 38 197151.0 39 90021.0 40 240.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.71511560157271 24.249247953181037 29.079395427727977 13.956241017518266 2 30.607658145627337 25.373649660553905 30.392725970108025 13.625966223710732 3 29.57928537209593 24.423934294629717 33.1223214401319 12.874458893142455 4 26.407417318008985 26.113827734882456 32.503851947121504 14.974902999987053 5 23.15764714006413 30.65934113361617 31.252238876828326 14.930772849491369 6 21.698115243352422 39.60945356299714 27.803073789064353 10.889357404586084 7 86.57903936538901 3.9411785016033596 7.411167841312727 2.0686142916949 8 87.8269839146141 3.1758602681904695 7.146710631374055 1.8504451858213817 9 83.57969969918128 5.289252096451893 8.68446834497909 2.4465798593877452 10-11 43.01114367223275 24.78636259662237 19.129503109611093 13.072990621533787 12-13 30.07966085601702 27.75090526152239 26.3626937302817 15.806740152178886 14-15 16.022265764929802 31.505690523562695 35.865781761839614 16.606261949667893 16-17 20.78082312980954 24.08448819815193 33.906144125402996 21.228544546635533 18-19 25.477015636531565 27.414318453524157 29.496959443420618 17.611706466523668 20-21 27.866841317042223 26.707318915326216 28.360311349541 17.065528418090555 22-23 22.223199295643955 24.941789202463518 30.453850004963297 22.381161496929234 24-25 20.86126084911157 26.341006296908514 34.208311573968174 18.589421280011738 26-27 18.08856025653752 33.57241660588431 29.902600765641928 18.436422371936246 28-29 16.906271444663595 28.656112835076243 36.412930889378984 18.02468483088118 30-31 24.1916845417154 28.0629453476679 30.48082442458168 17.264545686035017 32-33 26.939622617079774 27.491357395954267 27.809439752094296 17.759580234871667 34-35 20.59928528577779 28.34078186973729 30.12362915999499 20.936303684489925 36-37 23.63946422328777 29.452829292924932 29.00127750851313 17.906428975274167 38-39 20.69196939158657 31.610944708913642 27.520166076106705 20.17691982339308 40-41 21.369404965882755 27.094347888010837 28.589755762815006 22.9464913832914 42-43 22.105428979590076 25.955164198687104 27.380924122036593 24.558482699686234 44-45 19.804295190784675 32.10829905783747 27.651693346165963 20.435712405211888 46-47 22.36664925917454 30.012656397684946 27.223771153339865 20.39692318980065 48-49 21.959767113650784 26.4650886271531 31.002671546519007 20.572472712677115 50-51 19.497326295527426 31.30003754839211 28.742862568568974 20.45977358751149 52-53 22.864057556937606 26.013374996223583 29.528735309731076 21.59383213710774 54-55 22.297648693790702 26.813436282104952 30.582464037703765 20.306450986400577 56-57 23.69638024868257 24.88811010742293 29.05652111989158 22.358988524002918 58-59 24.7617619259304 26.988770009624474 28.00489639664913 20.244571667795995 60-61 25.824230365859446 29.268216365056688 25.80712858382139 19.10042468526247 62-63 24.353962650139618 25.4509583471802 30.239133624800928 19.95594537787925 64-65 20.80590934005464 29.945436143995924 29.874601318078042 19.374053197871394 66-67 19.07970833099555 29.268324262735163 25.937091337542782 25.714876068726504 68-69 18.647470231030507 32.56788921929556 25.188443295454054 23.596197254219877 70-71 20.18625297258104 29.616564020008546 28.973979395859317 21.223203611551096 72-73 23.67409937807778 30.15081937497033 25.85298509717265 20.32209614977924 74-75 21.95248402035382 32.14746591512337 25.12899167461513 20.771058389907683 76-77 26.960716613221347 27.39565215514823 26.081404482501153 19.562226749129266 78-79 19.342708922274827 29.7783026400404 29.331228609285244 21.54775982839953 80-81 17.79297456635923 29.08689431638189 29.81412466929362 23.306006447965267 82-83 20.17109334875551 26.768928489734616 31.090608154474946 21.96937000703493 84-85 17.85582496407007 26.790400127750853 29.55187936176365 25.80189554641542 86 19.474883578404928 26.821960198704364 30.96641792655189 22.736738296338814 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 597.0 1 694.0 2 2193.5 3 2368.5 4 1182.0 5 1378.5 6 1645.0 7 1756.0 8 1819.0 9 1873.0 10 1876.0 11 1883.0 12 1966.0 13 2067.5 14 2081.0 15 2198.0 16 2318.0 17 2325.0 18 2576.5 19 2527.0 20 2586.0 21 2942.0 22 2732.0 23 3115.0 24 3999.0 25 5069.5 26 6153.5 27 7224.0 28 8748.5 29 9507.0 30 11391.0 31 14265.5 32 15891.0 33 16371.0 34 16745.5 35 18626.0 36 19977.0 37 21008.5 38 24546.5 39 28380.0 40 31874.5 41 38869.5 42 44095.5 43 44494.0 44 46040.0 45 49551.0 46 54652.5 47 58045.0 48 54908.0 49 49129.5 50 46744.0 51 41760.0 52 33592.5 53 27645.0 54 24192.5 55 24618.0 56 23503.5 57 21275.0 58 20139.5 59 16683.5 60 13239.5 61 10447.5 62 7546.5 63 5495.0 64 4676.0 65 3778.5 66 2367.5 67 1487.5 68 1017.5 69 752.0 70 542.0 71 494.0 72 361.5 73 141.0 74 60.0 75 70.0 76 64.0 77 38.5 78 17.5 79 13.0 80 11.0 81 7.5 82 4.5 83 4.5 84 4.0 85 1.5 86 1.0 87 1.0 88 0.5 89 0.5 90 0.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 926804.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.667758123577965 #Duplication Level Percentage of deduplicated Percentage of total 1 81.01165431674316 14.312943136591288 2 6.97501129875296 2.464656250711814 3 2.150074822569163 1.1396100573824035 4 1.0751489270591803 0.7598188476042387 5 0.6379596348201128 0.5635658260303938 6 0.49641337916175987 0.5262306907402782 7 0.3648201537139311 0.4511887964096987 8 0.2702502794082801 0.3819773255531884 9 0.2607410816889403 0.41460393277442525 >10 3.4929747736063215 15.372744166377656 >50 1.6703542753584981 21.576087370764117 >100 1.590285670713732 40.89931769387808 >500 0.003695474060527651 0.4859807551951691 >1k 0.0 0.0 >5k 6.159123434212751E-4 0.6512751499872564 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5985 0.6457676056641966 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03323248496985339 0.0 2 0.0 0.0 0.0 0.12257176274595276 0.0 3 0.0 0.0 0.0 0.1742547507347832 0.0 4 0.0 0.0 0.0 0.26424141458172384 0.0 5 0.0 0.0 0.0 0.4427041747769755 0.0 6 0.0 0.0 0.0 0.5923582548197893 0.0 7 0.0 0.0 0.0 0.6772737277784732 0.0 8 0.0 0.0 0.0 0.8651235860009237 0.0 9 0.0 0.0 0.0 0.9268410580877942 0.0 10 0.0 0.0 0.0 1.0591236118963665 0.0 11 0.0 0.0 0.0 1.2676898243857384 0.0 12 0.0 0.0 0.0 1.4081726017583005 0.0 13 0.0 0.0 0.0 1.463416213136758 0.0 14 0.0 0.0 0.0 1.4851036465099416 0.0 15 0.0 0.0 0.0 1.5214651641555281 0.0 16 0.0 0.0 0.0 1.6088622837191036 0.0 17 0.0 0.0 0.0 1.7100703061272933 0.0 18 0.0 0.0 0.0 1.8267076965572009 0.0 19 0.0 0.0 0.0 1.9048256157720511 0.0 20 0.0 0.0 0.0 1.9840225117716368 0.0 21 0.0 0.0 0.0 2.098825641667494 0.0 22 0.0 0.0 0.0 2.22150530209192 0.0 23 0.0 0.0 0.0 2.352169390723389 0.0 24 0.0 0.0 0.0 2.4473351431370602 0.0 25 0.0 0.0 0.0 2.5405587373382073 0.0 26 0.0 0.0 0.0 2.6296822197573597 0.0 27 0.0 0.0 0.0 2.7242005861001894 0.0 28 0.0 0.0 0.0 2.828861334219533 0.0 29 0.0 0.0 0.0 2.943232873401496 0.0 30 0.0 0.0 0.0 3.0696889525724966 0.0 31 1.0789767847354997E-4 0.0 0.0 3.1970082131712854 0.0 32 1.0789767847354997E-4 0.0 0.0 3.3173141246692937 0.0 33 1.0789767847354997E-4 0.0 0.0 3.4379437292027224 0.0 34 1.0789767847354997E-4 0.0 0.0 3.5611628780195166 0.0 35 1.0789767847354997E-4 0.0 0.0 3.702724632176814 0.0 36 1.0789767847354997E-4 0.0 0.0 3.8327413347374417 0.0 37 1.0789767847354997E-4 0.0 0.0 3.9682608189002204 0.0 38 1.0789767847354997E-4 0.0 0.0 4.118778080370823 0.0 39 1.0789767847354997E-4 0.0 0.0 4.327236395181721 0.0 40 1.0789767847354997E-4 0.0 0.0 4.494909387529618 0.0 41 1.0789767847354997E-4 0.0 0.0 4.666898287016457 0.0 42 1.0789767847354997E-4 0.0 0.0 4.832305428116409 0.0 43 1.0789767847354997E-4 0.0 0.0 4.968364400671555 0.0 44 1.0789767847354997E-4 0.0 0.0 5.120392229640787 0.0 45 1.0789767847354997E-4 0.0 0.0 5.272204263253072 0.0 46 1.0789767847354997E-4 0.0 0.0 5.440740437028757 0.0 47 1.0789767847354997E-4 0.0 0.0 5.605068601343974 0.0 48 1.0789767847354997E-4 0.0 0.0 5.76087284905978 0.0 49 1.0789767847354997E-4 0.0 0.0 5.938256632470296 0.0 50 1.0789767847354997E-4 0.0 0.0 6.12103529980449 0.0 51 1.0789767847354997E-4 0.0 0.0 6.292808403934381 0.0 52 1.0789767847354997E-4 0.0 0.0 6.494361267322972 0.0 53 1.0789767847354997E-4 0.0 0.0 6.686203339648944 0.0 54 1.0789767847354997E-4 0.0 0.0 6.880419160901334 0.0 55 1.0789767847354997E-4 0.0 0.0 7.066111065554313 0.0 56 1.0789767847354997E-4 0.0 0.0 7.260866375199071 0.0 57 1.0789767847354997E-4 0.0 0.0 7.453463731274358 0.0 58 1.0789767847354997E-4 0.0 0.0 7.63225018450503 0.0 59 1.0789767847354997E-4 0.0 0.0 7.826358108078947 0.0 60 1.0789767847354997E-4 0.0 0.0 8.029421538966167 0.0 61 1.0789767847354997E-4 0.0 0.0 8.240253602703485 0.0 62 1.0789767847354997E-4 0.0 0.0 8.490144626048226 0.0 63 1.0789767847354997E-4 0.0 0.0 8.737554002788077 0.0 64 1.0789767847354997E-4 0.0 0.0 8.954104643484492 0.0 65 1.0789767847354997E-4 0.0 0.0 9.160836595439813 0.0 66 1.0789767847354997E-4 0.0 0.0 9.352894463122732 0.0 67 1.0789767847354997E-4 0.0 0.0 9.566316071143413 0.0 68 1.0789767847354997E-4 0.0 0.0 9.805956815033168 0.0 69 1.0789767847354997E-4 0.0 0.0 10.069658741222524 0.0 70 1.0789767847354997E-4 0.0 0.0 10.297754433515609 0.0 71 1.0789767847354997E-4 0.0 0.0 10.525310637416325 0.0 72 1.0789767847354997E-4 0.0 0.0 10.765814562733869 0.0 73 1.0789767847354997E-4 0.0 0.0 11.017431948934187 0.0 74 1.0789767847354997E-4 0.0 0.0 11.283076033336068 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTACGA 20 4.0904808E-5 80.00001 9 GATCGCG 25 1.2846085E-6 80.0 1 TAATACG 35 1.2896635E-9 79.99999 1 CGTAAGG 145 0.0 74.48276 2 CGTTTTT 3350 0.0 73.07462 1 TGCGTAG 55 0.0 72.72727 1 CGTGCGG 105 0.0 72.38096 2 TCACGGG 150 0.0 72.0 3 TACGGGT 140 0.0 71.428566 4 CTAACGG 85 0.0 70.588234 2 CGAAACG 100 0.0 68.0 80 TTTACGG 125 0.0 67.2 2 AGGGTAA 455 0.0 66.81319 6 CCTAACG 30 3.795005E-6 66.666664 1 TCGTGCG 60 0.0 66.666664 1 ACTACGG 30 3.795005E-6 66.666664 2 CGCGAGG 110 0.0 65.454544 2 TAGTGCG 55 9.094947E-12 65.454544 1 TAGGGCG 130 0.0 64.61539 5 TTCCGCG 25 1.2354009E-4 64.0 1 >>END_MODULE