##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547831_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1966441 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03776721498382 33.0 31.0 34.0 31.0 34.0 2 32.475462523411586 34.0 31.0 34.0 31.0 34.0 3 32.61328969442765 34.0 31.0 34.0 31.0 34.0 4 36.133197995770026 37.0 35.0 37.0 35.0 37.0 5 36.088639832062086 37.0 35.0 37.0 35.0 37.0 6 36.144297743995374 37.0 36.0 37.0 35.0 37.0 7 36.34318192104416 37.0 37.0 37.0 35.0 37.0 8 36.34262812868528 37.0 37.0 37.0 35.0 37.0 9 38.13859810693532 39.0 39.0 39.0 37.0 39.0 10-11 37.72984417025479 39.0 37.5 39.0 35.0 39.0 12-13 37.13788895776685 39.0 37.0 39.0 34.0 39.0 14-15 38.34281120053945 40.0 37.0 41.0 33.5 41.0 16-17 38.48154839123066 40.0 37.0 41.0 34.0 41.0 18-19 38.367146281022414 40.0 37.0 41.0 34.0 41.0 20-21 38.18683932037625 40.0 35.5 41.0 34.0 41.0 22-23 38.0026982757174 40.0 35.0 41.0 34.0 41.0 24-25 37.994990696390076 40.0 35.0 41.0 34.0 41.0 26-27 37.991820502115246 40.0 35.0 41.0 34.0 41.0 28-29 37.923333830000495 40.0 36.0 41.0 34.0 41.0 30-31 37.7868489316486 40.0 35.5 41.0 33.5 41.0 32-33 37.51063367779659 40.0 35.0 41.0 33.0 41.0 34-35 37.25501655020415 40.0 35.0 41.0 33.0 41.0 36-37 37.08805501919458 40.0 35.0 41.0 32.0 41.0 38-39 36.99089192098822 40.0 35.0 41.0 32.0 41.0 40-41 36.892185425344564 40.0 35.0 41.0 31.5 41.0 42-43 36.8466526582796 40.0 35.0 41.0 31.5 41.0 44-45 36.73739690130545 39.0 35.0 41.0 31.0 41.0 46-47 36.611564242202036 39.0 35.0 41.0 31.0 41.0 48-49 36.50970509666956 39.0 35.0 41.0 31.0 41.0 50-51 36.28107632011334 39.0 35.0 40.5 31.0 41.0 52-53 36.09069684775694 38.0 35.0 40.0 30.0 41.0 54-55 35.91359415309181 38.0 35.0 40.0 30.0 41.0 56-57 35.628142415663625 37.5 35.0 40.0 29.5 41.0 58-59 35.37420522659973 37.0 35.0 40.0 29.0 41.0 60-61 35.03399135799142 36.5 34.5 40.0 28.5 41.0 62-63 34.660570289167076 36.0 34.0 39.0 27.5 41.0 64-65 34.30710430671452 35.0 34.0 39.0 27.0 40.0 66-67 34.024196759526475 35.0 34.0 38.5 26.5 40.0 68-69 33.56173640602489 35.0 33.5 37.5 25.5 40.0 70-71 33.27354647304445 35.0 33.0 37.0 26.0 39.0 72-73 32.98388891403302 35.0 33.0 36.5 25.0 39.0 74-75 32.665841741501524 35.0 33.0 36.0 25.0 38.5 76-77 30.70240627610999 33.0 30.0 34.5 21.0 36.0 78-79 31.742922111571104 34.5 32.0 35.0 23.0 37.0 80-81 31.857084194237203 35.0 32.5 35.0 23.0 36.5 82-83 31.65483556333498 35.0 32.0 35.0 21.0 36.0 84-85 31.422231584878467 34.5 32.0 35.0 20.0 36.0 86 30.996594354979376 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 3.0 10 6.0 11 10.0 12 21.0 13 50.0 14 185.0 15 607.0 16 1519.0 17 3489.0 18 7489.0 19 11841.0 20 14560.0 21 14786.0 22 13383.0 23 11829.0 24 11872.0 25 12946.0 26 15338.0 27 18483.0 28 22628.0 29 28693.0 30 35932.0 31 44767.0 32 56577.0 33 76324.0 34 184867.0 35 180606.0 36 170570.0 37 326726.0 38 479379.0 39 220545.0 40 407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.05684787898544 24.732498966406823 30.424965712167314 12.78568744244043 2 29.860545015080543 26.13543960891784 31.150794760686946 12.853220615314672 3 29.327805919424993 24.79642155549035 32.01977582851456 13.855996696570097 4 26.56779430453291 26.951431545619727 32.43168750041318 14.04908664943418 5 24.510015810288742 31.666040323610012 29.600125302513526 14.22381856358772 6 21.996286692557774 41.49913473122255 25.912397066578656 10.592181509641021 7 88.74479325848068 3.5033850494370284 6.324318909135846 1.42750278294645 8 89.61082483532432 3.5899882071213933 5.257874505261027 1.5413124522932546 9 85.0517762800918 5.879454303485332 6.47530233553918 2.5934670808836877 10-11 37.04446255951742 29.98213523822988 20.60244878946279 12.370953412789907 12-13 28.94589769029429 25.18402535341767 28.256860999134986 17.61321595715305 14-15 18.097669851269373 31.325399541608416 32.86528810170252 17.71164250541969 16-17 23.152054905283197 27.018430758919287 30.88536599877647 18.944148337021044 18-19 24.576048811024588 28.363576634132425 28.506169267219306 18.55420528762368 20-21 26.950719599520152 27.32355051588123 28.56747291172224 17.15825697287638 22-23 22.613467680952542 24.274793904317495 31.534965961348448 21.576772453381516 24-25 20.51594733836408 28.471741587975437 32.021098014128064 18.991213059532424 26-27 19.714194323653746 32.45645305401993 28.686240777119682 19.143111845206644 28-29 18.253865740187475 28.488192628204967 33.64883563758079 19.60910599402677 30-31 22.717157545026776 28.34382012986914 29.82761750797507 19.111404817129017 32-33 25.045450130464125 28.029826473308887 28.08563796218651 18.83908543404048 34-35 20.62622270385941 28.002619961646445 30.34555829541797 21.02559903907618 36-37 22.57029323534243 29.15930353364276 29.322949429960016 18.9474538010548 38-39 20.687017815434075 30.20896635088467 28.221492533973812 20.882523299707444 40-41 21.39667551683473 26.932081867699054 29.059987052751644 22.611255562714568 42-43 21.17131914967192 27.294716698848326 28.46042673032143 23.073537421158328 44-45 20.882523299707444 29.87671636219953 28.19209933071981 21.04866100737322 46-47 21.29804555539678 29.682990743175107 28.122150626436287 20.896813074991822 48-49 21.64008480295112 27.224437448161424 30.21377198705682 20.921705761830637 50-51 19.929863138533015 29.251983659819945 29.112493077595513 21.705660124051523 52-53 21.853592352885236 26.60062010505273 29.628857412960773 21.916930129101257 54-55 21.712220198826206 27.04856133491928 30.077841135330274 21.161377330924243 56-57 21.895876865870882 26.840647647196125 29.278961331664664 21.984514155268325 58-59 22.458797390819253 27.45137026740187 28.839436321760985 21.250396020017888 60-61 23.75133553460287 28.787921936127248 27.26616257492597 20.194579954343915 62-63 22.935216464668912 26.826179885386846 29.554433618908476 20.684170031035766 64-65 21.2344026594238 29.553416553051935 29.093499372724636 20.11868141479963 66-67 20.63809694773451 29.300828247580274 26.56138678963671 23.499688015048505 68-69 19.6905475424892 31.01087192547348 26.794422004016393 22.504158528020927 70-71 20.592430690775874 29.38542270019797 28.428007756144225 21.594138852881933 72-73 22.4622808413779 29.499817182412286 27.51480975020354 20.523092226006273 74-75 21.275898946370624 30.901028812967184 26.101545889248644 21.721526351413544 76-77 23.540141809492376 28.985410698820864 26.730296001761555 20.7441514899252 78-79 20.098187537790356 29.323839362584486 28.684308351992254 21.893664747632908 80-81 18.83359327841517 29.137970577301836 28.338836507172093 23.689599637110902 82-83 20.230965485361626 28.702666390702795 29.224904281389573 21.841463842546 84-85 19.012825708983897 27.834397268974765 28.740323254041183 24.41245376800016 86 19.749689922046986 28.70271724399562 29.330094317602207 22.21749851635518 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 588.0 1 821.5 2 3261.0 3 3647.0 4 1967.0 5 2310.5 6 2652.5 7 2791.0 8 2887.5 9 3022.0 10 3100.0 11 3130.5 12 3153.0 13 3300.5 14 3416.0 15 3535.5 16 3652.5 17 3796.5 18 3934.5 19 4256.5 20 4634.0 21 4681.0 22 4827.5 23 5880.0 24 7726.0 25 10183.0 26 12277.0 27 15216.0 28 20755.5 29 23933.0 30 25615.0 31 29643.5 32 34632.5 33 37893.0 34 43236.0 35 50544.0 36 53127.0 37 54890.0 38 60352.5 39 64912.0 40 71904.5 41 83049.5 42 91051.0 43 94040.0 44 98406.0 45 104009.5 46 107526.5 47 111450.5 48 111839.0 49 105221.5 50 99860.0 51 92800.0 52 76762.5 53 65158.5 54 60120.0 55 54970.5 56 48403.5 57 44574.0 58 39555.0 59 29535.5 60 21754.5 61 17246.0 62 13509.0 63 9278.5 64 7057.0 65 5915.0 66 4012.0 67 2602.5 68 1578.5 69 1071.5 70 766.5 71 593.0 72 441.5 73 206.5 74 93.5 75 62.0 76 55.5 77 51.0 78 40.0 79 29.0 80 19.5 81 9.0 82 8.0 83 5.5 84 3.0 85 3.0 86 3.0 87 2.0 88 1.0 89 0.5 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1966441.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.255189068024915 #Duplication Level Percentage of deduplicated Percentage of total 1 79.21693526148483 14.461201305878953 2 7.9117298751175085 2.888602494508225 3 2.5552552024271042 1.3994000051208317 4 1.2221731528818789 0.8924400791889128 5 0.7716294976913798 0.7043121185410616 6 0.5520957727685638 0.6047167629328472 7 0.4138053175939715 0.5287866017022433 8 0.32880432711543167 0.48019081263015334 9 0.297087987640017 0.48810576457868027 >10 3.7656623483301654 16.80257455576844 >50 1.515280367145619 20.020021407047984 >100 1.4439225142619394 39.364104235681076 >500 0.00421378165623025 0.5633355589147029 >1k 0.0011236751083280665 0.30277042693057854 >5k 2.8091877708201664E-4 0.4994378705753565 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9739 0.49526021884206034 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2040 0.10374071736706059 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.085329282699049E-5 0.0 0.0 0.03371573314429469 0.0 2 5.085329282699049E-5 0.0 0.0 0.1101482322632614 0.0 3 5.085329282699049E-5 0.0 0.0 0.15978104606240412 0.0 4 5.085329282699049E-5 0.0 0.0 0.24450263191217025 0.0 5 5.085329282699049E-5 0.0 0.0 0.4633243509467103 0.0 6 5.085329282699049E-5 0.0 0.0 0.6096801277027889 0.0 7 5.085329282699049E-5 0.0 0.0 0.7119969528706938 0.0 8 1.0170658565398098E-4 0.0 0.0 0.9075787170832992 0.0 9 1.0170658565398098E-4 0.0 0.0 0.96789072237611 0.0 10 1.0170658565398098E-4 0.0 0.0 1.1793895672435635 0.0 11 1.0170658565398098E-4 0.0 0.0 1.4494205521548829 0.0 12 1.0170658565398098E-4 0.0 0.0 1.7059245611742229 0.0 13 1.0170658565398098E-4 0.0 0.0 1.7935956380079545 0.0 14 1.0170658565398098E-4 0.0 0.0 1.8300574489649066 0.0 15 1.0170658565398098E-4 0.0 0.0 1.897234648789361 0.0 16 1.0170658565398098E-4 0.0 0.0 2.0279276113547264 0.0 17 1.0170658565398098E-4 0.0 0.0 2.2038800045361135 0.0 18 1.0170658565398098E-4 0.0 0.0 2.395698625079522 0.0 19 1.0170658565398098E-4 0.0 0.0 2.5436817072060642 0.0 20 1.5255987848097145E-4 0.0 0.0 2.688257618713198 0.0 21 1.5255987848097145E-4 0.0 0.0 2.8630912394523915 0.0 22 1.5255987848097145E-4 0.0 0.0 3.0537402342607787 0.0 23 1.5255987848097145E-4 0.0 0.0 3.259238390574647 0.0 24 1.5255987848097145E-4 0.0 0.0 3.410221816977982 0.0 25 2.0341317130796196E-4 0.0 0.0 3.550627758473303 0.0 26 2.0341317130796196E-4 0.0 0.0 3.686609463492675 0.0 27 2.0341317130796196E-4 0.0 0.0 3.8400338479517058 0.0 28 2.0341317130796196E-4 0.0 0.0 3.997323082665587 0.0 29 2.0341317130796196E-4 0.0 0.0 4.174241688410687 0.0 30 2.0341317130796196E-4 0.0 0.0 4.361432659306839 0.0 31 2.0341317130796196E-4 0.0 0.0 4.542877208113541 0.0 32 2.0341317130796196E-4 0.0 0.0 4.707845290044299 0.0 33 2.0341317130796196E-4 0.0 0.0 4.877390168329485 0.0 34 2.0341317130796196E-4 0.0 0.0 5.06198762129146 0.0 35 2.0341317130796196E-4 0.0 0.0 5.260722289659339 0.0 36 2.0341317130796196E-4 0.0 0.0 5.450405071904013 0.0 37 2.0341317130796196E-4 0.0 0.0 5.646546222337716 0.0 38 2.0341317130796196E-4 0.0 0.0 5.856621175006014 0.0 39 2.0341317130796196E-4 0.0 0.0 6.165961755272597 0.0 40 2.0341317130796196E-4 0.0 0.0 6.3984121567847705 0.0 41 2.0341317130796196E-4 0.0 0.0 6.635744474408335 0.0 42 2.0341317130796196E-4 0.0 0.0 6.874805803988017 0.0 43 2.0341317130796196E-4 0.0 0.0 7.084423077020872 0.0 44 2.0341317130796196E-4 0.0 0.0 7.294498029689169 0.0 45 2.0341317130796196E-4 0.0 0.0 7.499029973439325 0.0 46 2.0341317130796196E-4 0.0 0.0 7.74582100352871 0.0 47 2.0341317130796196E-4 0.0 0.0 7.999019548514296 0.0 48 2.5426646413495243E-4 0.0 0.0 8.223485983052631 0.0 49 2.5426646413495243E-4 0.0 0.0 8.473633330468598 0.0 50 2.5426646413495243E-4 0.0 0.0 8.71101650138499 0.0 51 2.5426646413495243E-4 0.0 0.0 8.967469657111502 0.0 52 2.5426646413495243E-4 0.0 0.0 9.242992797648137 0.0 53 2.5426646413495243E-4 0.0 0.0 9.50148008508773 0.0 54 2.5426646413495243E-4 0.0 0.0 9.754831189951796 0.0 55 3.051197569619429E-4 0.0 0.0 9.994909585388019 0.0 56 3.051197569619429E-4 0.0 0.0 10.249430315987105 0.0 57 3.051197569619429E-4 0.0 0.0 10.516104983571843 0.0 58 3.559730497889334E-4 0.0 0.0 10.774795684182743 0.0 59 3.559730497889334E-4 0.0 0.0 11.050776504354822 0.0 60 3.559730497889334E-4 0.0 0.0 11.33214777356656 0.0 61 3.559730497889334E-4 0.0 0.0 11.623079461829773 0.0 62 3.559730497889334E-4 0.0 0.0 11.966593454876094 0.0 63 4.068263426159239E-4 0.0 0.0 12.264441190963776 0.0 64 4.576796354429144E-4 0.0 0.0 12.565797804256523 0.0 65 4.576796354429144E-4 0.0 0.0 12.840914118450542 0.0 66 4.576796354429144E-4 0.0 0.0 13.123404160104473 0.0 67 4.576796354429144E-4 0.0 0.0 13.425981252425066 0.0 68 5.085329282699049E-4 0.0 0.0 13.747831742727088 0.0 69 5.085329282699049E-4 0.0 0.0 14.14067342981559 0.0 70 5.085329282699049E-4 0.0 0.0 14.443759055064454 0.0 71 5.085329282699049E-4 0.0 0.0 14.733215997835684 0.0 72 5.085329282699049E-4 0.0 0.0 15.037725515283704 0.0 73 5.085329282699049E-4 0.0 0.0 15.325555152684469 0.0 74 5.085329282699049E-4 0.0 0.0 15.649185508235437 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 5440 0.0 71.9853 1 CGTAAGG 465 0.0 67.09677 2 GACGGGT 305 0.0 65.57377 4 TACGGGA 1135 0.0 65.19824 4 CCGATCC 1420 0.0 64.788734 80 GCGGGAT 1585 0.0 64.35332 5 TAAGGGA 2945 0.0 64.244484 4 CGGGATT 1225 0.0 63.34694 6 GCGTAAG 215 0.0 63.25581 1 CTACGGG 575 0.0 62.608696 3 TAGGGTA 1770 0.0 62.598866 5 CGGGTAT 260 0.0 61.53846 6 TAGGGAC 2470 0.0 61.214573 5 TAGGGCG 335 0.0 60.895523 5 GGACGTA 125 0.0 60.8 8 TGCGGGA 1900 0.0 60.42105 4 AGGGATT 4590 0.0 60.39216 6 CGGGATG 1120 0.0 60.35714 6 CGTAGGG 1205 0.0 60.082985 3 TAGGGAT 4205 0.0 60.02378 5 >>END_MODULE