##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547830_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1312856 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.009553980025224 33.0 31.0 34.0 31.0 34.0 2 32.43064128891516 34.0 31.0 34.0 31.0 34.0 3 32.542734313588085 34.0 31.0 34.0 31.0 34.0 4 36.0738062666431 37.0 35.0 37.0 35.0 37.0 5 36.025506224597365 37.0 35.0 37.0 35.0 37.0 6 36.08745361258204 37.0 35.0 37.0 35.0 37.0 7 36.341208022814385 37.0 37.0 37.0 35.0 37.0 8 36.35760205231952 37.0 37.0 37.0 35.0 37.0 9 38.16204899851926 39.0 39.0 39.0 37.0 39.0 10-11 37.67340172875015 39.0 37.5 39.0 35.0 39.0 12-13 36.91701298543023 39.0 35.0 39.0 33.5 39.0 14-15 38.04811685363818 40.0 36.0 41.0 33.0 41.0 16-17 38.2373104894977 40.0 36.0 41.0 34.0 41.0 18-19 38.121160279573694 40.0 36.0 41.0 34.0 41.0 20-21 37.94152328968295 40.0 35.0 41.0 34.0 41.0 22-23 37.75086566995923 40.0 35.0 41.0 34.0 41.0 24-25 37.73851244919473 40.0 35.0 41.0 34.0 41.0 26-27 37.73965956662421 40.0 35.0 41.0 34.0 41.0 28-29 37.682369201191904 40.0 35.0 41.0 34.0 41.0 30-31 37.54574797235949 40.0 35.0 41.0 33.5 41.0 32-33 37.25373841457098 40.0 35.0 41.0 33.0 41.0 34-35 36.987283068363936 40.0 35.0 41.0 32.0 41.0 36-37 36.8330708013674 39.5 35.0 41.0 31.5 41.0 38-39 36.750385419269136 39.0 35.0 41.0 31.0 41.0 40-41 36.652948990597594 39.0 35.0 41.0 31.0 41.0 42-43 36.6195850877781 39.0 35.0 41.0 31.0 41.0 44-45 36.49082648820587 39.0 35.0 41.0 31.0 41.0 46-47 36.3712273090118 39.0 35.0 41.0 31.0 41.0 48-49 36.2834983425448 38.0 35.0 41.0 31.0 41.0 50-51 36.05644411877616 38.0 35.0 40.0 30.5 41.0 52-53 35.88760991304454 38.0 35.0 40.0 30.0 41.0 54-55 35.71573615080405 37.5 35.0 40.0 29.5 41.0 56-57 35.42355749602393 37.0 35.0 40.0 29.0 41.0 58-59 35.170396448658494 36.5 35.0 40.0 28.5 41.0 60-61 34.81483308146514 36.0 34.0 39.5 28.0 41.0 62-63 34.37744924043459 35.5 34.0 39.0 26.5 40.5 64-65 34.020470257210235 35.0 34.0 39.0 26.0 40.0 66-67 33.70737994113597 35.0 34.0 38.0 26.0 40.0 68-69 33.25066915183386 35.0 33.5 37.0 24.5 40.0 70-71 32.94845321954578 35.0 33.0 37.0 24.5 39.0 72-73 32.67555314520405 35.0 33.0 36.0 24.0 39.0 74-75 32.36952034343447 35.0 33.0 36.0 23.5 38.0 76-77 30.4004536674243 33.0 30.0 34.5 19.5 36.0 78-79 31.39810497114687 34.0 31.5 35.0 20.0 37.0 80-81 31.59194420408636 35.0 32.0 35.0 20.0 36.5 82-83 31.403622712620425 34.5 32.0 35.0 19.5 36.0 84-85 31.189775573254035 34.0 32.0 35.0 19.0 36.0 86 30.76984604556783 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 1.0 10 7.0 11 13.0 12 9.0 13 39.0 14 118.0 15 388.0 16 957.0 17 2167.0 18 4564.0 19 7806.0 20 9907.0 21 10090.0 22 9000.0 23 8285.0 24 8597.0 25 9596.0 26 11282.0 27 14178.0 28 17450.0 29 21792.0 30 27504.0 31 33788.0 32 42196.0 33 55642.0 34 142871.0 35 128077.0 36 108642.0 37 207264.0 38 299012.0 39 131349.0 40 261.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.37861273437452 24.648095449919868 30.62095157427776 13.352340241427848 2 30.230505097284087 24.870587482557113 31.657394261061384 13.241513159097417 3 28.852059936504844 25.039760643970094 32.955099416843886 13.153080002681177 4 26.9343324782002 27.06283095785067 32.49130140700884 13.511535156940289 5 23.950456104858418 31.715664170327894 30.061103426423003 14.272776298390685 6 21.863783994588896 40.7874130902399 26.525300566094074 10.823502349077128 7 89.80802159566625 2.9765640710024557 5.749450053928229 1.4659642794030723 8 91.14792482953196 2.0073031619614032 5.334324556539332 1.510447451967314 9 86.71484153631472 4.96474860913916 6.274031576958936 2.0463782775871837 10-11 39.89607390300231 28.64902929186445 19.848635341575925 11.606261463557313 12-13 28.55526424832579 26.558548690793206 28.04538349978977 16.84080356109124 14-15 16.106259940160992 31.986371696515082 35.18340930002986 16.723959063294068 16-17 21.694801257716 26.363401622112402 31.96691030851822 19.974886811653374 18-19 24.455309645536143 27.870345262542124 29.853426423004503 17.820918668917233 20-21 26.624130902399045 27.304213104864512 28.88926889163777 17.182387101098673 22-23 21.874219259385644 23.91016227217608 31.917019079015517 22.298599389422755 24-25 19.889119598798345 27.406090233810865 33.8478096607701 18.85698050662068 26-27 18.35700183416917 33.15062733460486 29.463398879999026 19.028971951226943 28-29 17.13436203208882 27.69903934628017 35.97892685869585 19.187671762935157 30-31 22.87265320796797 27.245143412529632 30.77237716855466 19.109826210947737 32-33 25.71793860103469 27.35924579694955 28.18492660276527 18.737888999250487 34-35 19.706692889395335 27.736971914665432 31.003057456415632 21.553277739523605 36-37 22.587892350722395 28.60058528886641 30.009193696795382 18.80232866361581 38-39 20.428173386875635 30.514199577105185 28.712859597701502 20.34476743831768 40-41 20.706459809758268 26.689103755476612 29.291255095760693 23.31318133900443 42-43 21.294757383901967 26.568184172521587 28.36266886848215 23.774389575094297 44-45 20.11846691487871 30.037186104188123 28.82254413279141 21.02180284814176 46-47 21.30568775250294 28.72005764531678 28.734339485823273 21.23991511635701 48-49 21.329871669093944 26.28982157982292 31.701763178901572 20.678543572181564 50-51 19.111006843096273 30.09214262645713 29.542691658491105 21.254158871955493 52-53 22.344263194135532 26.084201161437353 30.084716069393746 21.486819575033362 54-55 21.61965973419781 26.872939606476265 30.85902033429409 20.64838032503184 56-57 22.73006331235109 25.26034843120647 29.652985552109296 22.35660270433315 58-59 23.688850871687375 26.546970878755932 28.80925249989336 20.95492574966333 60-61 23.777284028103615 29.02188054135412 27.24110641227979 19.959729018262475 62-63 23.33469931203422 25.659325927596022 30.405162485451566 20.600812274918194 64-65 20.35676418434314 29.294987416746395 30.174482197590596 20.17376620131987 66-67 19.486981055043355 28.918061082098873 26.94731943183411 24.647638431023662 68-69 18.55732845034033 31.104058632477592 27.195214098118907 23.143398819063172 70-71 20.103537630935914 29.096412706344033 29.599666680885033 21.200382981835023 72-73 22.628224268312746 29.1022777821787 27.854616195530962 20.41488175397759 74-75 21.768228960373413 30.627959197352943 25.82792781538874 21.7758840268849 76-77 24.41387326561329 27.577586574612905 27.439681122682153 20.568859037091652 78-79 19.19890681080027 28.83842553943464 30.034101226638715 21.928566423126377 80-81 17.75503177804725 28.1157644098058 30.29067925195147 23.83852456019548 82-83 19.08796547374579 27.44859299115821 31.36912959227821 22.094311942817797 84-85 17.91875879761375 26.72406570103652 29.737153198827592 25.620022302522134 86 19.321616384432108 26.482873978562765 31.08551128227315 23.10999835473197 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 524.0 1 637.0 2 2280.0 3 2454.0 4 1178.5 5 1459.5 6 1892.5 7 2125.0 8 2279.5 9 2444.0 10 2487.0 11 2456.5 12 2377.0 13 2335.5 14 2310.0 15 2412.5 16 2544.5 17 2832.5 18 2893.5 19 2703.5 20 2814.0 21 2917.0 22 3262.5 23 3934.5 24 4477.5 25 5819.5 26 8216.5 27 11537.0 28 13677.0 29 13768.0 30 15701.5 31 20318.5 32 23472.0 33 24240.0 34 27693.0 35 32468.5 36 34089.0 37 35693.5 38 39020.0 39 43454.5 40 50232.5 41 57072.0 42 63980.5 43 68115.0 44 69996.0 45 72456.0 46 74382.5 47 77639.0 48 78746.5 49 72167.0 50 66389.0 51 59058.5 52 49079.5 53 43550.0 54 37364.0 55 33786.5 56 31517.5 57 29521.0 58 25785.0 59 19206.5 60 13444.5 61 9447.5 62 7099.5 63 4839.5 64 3850.0 65 3076.5 66 1840.5 67 1186.5 68 782.0 69 462.0 70 352.0 71 349.0 72 261.0 73 121.5 74 69.5 75 44.5 76 20.0 77 16.0 78 13.5 79 15.0 80 11.0 81 5.5 82 3.5 83 3.5 84 3.0 85 1.5 86 1.0 87 1.0 88 0.5 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1312856.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.737075136955685 #Duplication Level Percentage of deduplicated Percentage of total 1 79.01219108428234 14.804573610816984 2 8.353639494105071 3.1304554173617447 3 2.690546338511063 1.5123890671242841 4 1.3482310308829 1.0104762451051246 5 0.7711018165419196 0.7224096337394483 6 0.5345664531644477 0.6009727079182896 7 0.3849411377713199 0.5048869715208503 8 0.3220916341841172 0.4828044120554118 9 0.2575575701593432 0.43432879897506144 >10 3.4295593058233953 15.806838138341911 >50 1.474207286996131 20.0944603528153 >100 1.415222610484661 39.62611279057709 >500 0.004915389674621109 0.5925869151058117 >1k 8.192316124368515E-4 0.181206800487608 >5k 4.0961580621842573E-4 0.4954981380550603 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6456 0.491752332319767 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.616981603466032E-5 0.0 0.0 0.06055500374755495 0.0 2 7.616981603466032E-5 0.0 0.0 0.20230703138805778 0.0 3 7.616981603466032E-5 0.0 0.0 0.2875410555308427 0.0 4 7.616981603466032E-5 0.0 0.0 0.4602941982974523 0.0 5 7.616981603466032E-5 0.0 0.0 0.7969647851706508 0.0 6 7.616981603466032E-5 0.0 0.0 1.0497724045896883 0.0 7 7.616981603466032E-5 0.0 0.0 1.2275527552145855 0.0 8 7.616981603466032E-5 0.0 0.0 1.593396381629059 0.0 9 7.616981603466032E-5 0.0 0.0 1.6958447841956772 0.0 10 7.616981603466032E-5 0.0 0.0 1.9318950440870895 0.0 11 7.616981603466032E-5 0.0 0.0 2.308707124010554 0.0 12 7.616981603466032E-5 0.0 0.0 2.625345049266637 0.0 13 7.616981603466032E-5 0.0 0.0 2.728935999073775 0.0 14 7.616981603466032E-5 0.0 0.0 2.766411548562828 0.0 15 7.616981603466032E-5 0.0 0.0 2.825747835253828 0.0 16 7.616981603466032E-5 0.0 0.0 2.97107984424796 0.0 17 7.616981603466032E-5 0.0 0.0 3.1634086297354775 0.0 18 7.616981603466032E-5 0.0 0.0 3.413321796145198 0.0 19 7.616981603466032E-5 0.0 0.0 3.572364372025569 0.0 20 7.616981603466032E-5 0.0 0.0 3.7422992315988957 0.0 21 7.616981603466032E-5 0.0 0.0 3.9494049613971374 0.0 22 7.616981603466032E-5 0.0 0.0 4.189111372458213 0.0 23 7.616981603466032E-5 0.0 0.0 4.430188840207913 0.0 24 7.616981603466032E-5 0.0 0.0 4.6072074926724635 0.0 25 1.5233963206932064E-4 0.0 0.0 4.752082482770388 0.0 26 1.5233963206932064E-4 0.0 0.0 4.902594039254876 0.0 27 1.5233963206932064E-4 0.0 0.0 5.06331235108801 0.0 28 1.5233963206932064E-4 0.0 0.0 5.23134296526047 0.0 29 1.5233963206932064E-4 0.0 0.0 5.427937260445929 0.0 30 1.5233963206932064E-4 0.0 0.0 5.66429219960148 0.0 31 1.5233963206932064E-4 0.0 0.0 5.8613435136831455 0.0 32 1.5233963206932064E-4 0.0 0.0 6.030516675096126 0.0 33 1.5233963206932064E-4 0.0 0.0 6.212029346706722 0.0 34 1.5233963206932064E-4 0.0 0.0 6.402834735873546 0.0 35 1.5233963206932064E-4 0.0 0.0 6.620985088996813 0.0 36 2.2850944810398093E-4 0.0 0.0 6.824967856337634 0.0 37 2.2850944810398093E-4 0.0 0.0 7.034663359881053 0.0 38 2.2850944810398093E-4 0.0 0.0 7.269342563083842 0.0 39 2.2850944810398093E-4 0.0 0.0 7.617667131810343 0.0 40 2.2850944810398093E-4 0.0 0.0 7.841606390952244 0.0 41 2.2850944810398093E-4 0.0 0.0 8.073467310961751 0.0 42 2.2850944810398093E-4 0.0 0.0 8.315154137239729 0.0 43 2.2850944810398093E-4 0.0 0.0 8.529419829745228 0.0 44 2.2850944810398093E-4 0.0 0.0 8.744294880779004 0.0 45 2.2850944810398093E-4 0.0 0.0 8.958027384572262 0.0 46 2.2850944810398093E-4 0.0 0.0 9.196286569128679 0.0 47 2.2850944810398093E-4 0.0 0.0 9.449627377259958 0.0 48 2.2850944810398093E-4 0.0 0.0 9.683925731382574 0.0 49 2.2850944810398093E-4 0.0 0.0 9.924012991523822 0.0 50 2.2850944810398093E-4 0.0 0.0 10.174459346645786 0.0 51 2.2850944810398093E-4 0.0 0.0 10.42574356974413 0.0 52 2.2850944810398093E-4 0.0 0.0 10.721206286142579 0.0 53 2.2850944810398093E-4 0.0 0.0 10.975004113170066 0.0 54 2.2850944810398093E-4 0.0 0.0 11.232381921551182 0.0 55 2.2850944810398093E-4 0.0 0.0 11.495472466134899 0.0 56 2.2850944810398093E-4 0.0 0.0 11.762980860048627 0.0 57 2.2850944810398093E-4 0.0 0.0 12.027290121688898 0.0 58 3.0467926413864127E-4 0.0 0.0 12.28131645816449 0.0 59 3.0467926413864127E-4 0.0 0.0 12.542578927163374 0.0 60 3.0467926413864127E-4 0.0 0.0 12.827530208949039 0.0 61 3.0467926413864127E-4 0.0 0.0 13.119641453441961 0.0 62 3.808490801733016E-4 0.0 0.0 13.439097661891328 0.0 63 3.808490801733016E-4 0.0 0.0 13.771655078698654 0.0 64 3.808490801733016E-4 0.0 0.0 14.077096040997642 0.0 65 3.808490801733016E-4 0.0 0.0 14.360066907566404 0.0 66 4.5701889620796185E-4 0.0 0.0 14.633821226394973 0.0 67 4.5701889620796185E-4 0.0 0.0 14.923495036774787 0.0 68 4.5701889620796185E-4 0.0 0.0 15.253615019469004 0.0 69 4.5701889620796185E-4 0.0 0.0 15.698979933823663 0.0 70 4.5701889620796185E-4 0.0 0.0 15.99246223500521 0.0 71 4.5701889620796185E-4 0.0 0.0 16.27276715801276 0.0 72 4.5701889620796185E-4 0.0 0.0 16.557794609614458 0.0 73 4.5701889620796185E-4 0.0 0.0 16.857446665894813 0.0 74 4.5701889620796185E-4 0.0 0.0 17.18086370477798 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGTGCG 75 0.0 74.666664 1 CTAGCGG 125 0.0 73.6 2 CGTTTTT 4205 0.0 70.58264 1 CGAGGGA 920 0.0 70.0 4 TATAGCG 155 0.0 69.677414 1 CGTTAGG 290 0.0 68.965515 2 TACGCCA 35 1.1816155E-7 68.57143 1 ATGCGCG 65 0.0 67.69231 1 GATTCGC 30 3.7958853E-6 66.66667 9 TAGCGGG 1115 0.0 66.367714 3 ACGGGAT 715 0.0 65.45455 5 GGGCGAT 910 0.0 65.05495 7 GCGAGGG 1175 0.0 65.02128 3 TTAGCGG 445 0.0 64.71909 2 CGGGATT 870 0.0 64.36782 6 CGAACTA 25 1.235592E-4 64.0 80 TCCGCGG 75 0.0 64.0 2 TCTACCG 25 1.235592E-4 64.0 1 GCTAGCG 50 3.0013325E-10 64.0 1 TACGGGA 845 0.0 62.95858 4 >>END_MODULE