##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547829_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2761380 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.0088339888027 33.0 31.0 34.0 31.0 34.0 2 32.43238525664704 34.0 31.0 34.0 31.0 34.0 3 32.46755861199835 34.0 31.0 34.0 31.0 34.0 4 36.078786693609715 37.0 35.0 37.0 35.0 37.0 5 36.05756397163737 37.0 35.0 37.0 35.0 37.0 6 36.12469526106512 37.0 36.0 37.0 35.0 37.0 7 36.29199603097002 37.0 36.0 37.0 35.0 37.0 8 36.27240944745019 37.0 37.0 37.0 35.0 37.0 9 38.01721784035519 39.0 39.0 39.0 35.0 39.0 10-11 37.736446450687694 39.0 37.5 39.0 35.0 39.0 12-13 37.32772327604314 39.0 37.0 39.0 34.5 39.0 14-15 38.606998674575756 40.0 38.0 41.0 34.0 41.0 16-17 38.68054958028232 40.0 38.0 41.0 34.5 41.0 18-19 38.35613986485018 40.0 37.5 41.0 34.0 41.0 20-21 38.00141813151396 40.0 35.0 41.0 34.0 41.0 22-23 37.80896001274725 40.0 35.0 41.0 33.5 41.0 24-25 37.77251138923292 40.0 35.0 41.0 34.0 41.0 26-27 37.724100992981775 40.0 35.0 41.0 33.5 41.0 28-29 37.568920793226575 40.0 35.0 41.0 33.0 41.0 30-31 37.27858443966423 40.0 35.0 41.0 33.0 41.0 32-33 36.65407875772259 40.0 35.0 41.0 30.5 41.0 34-35 36.023164323635285 40.0 35.0 41.0 27.0 41.0 36-37 35.755991750501565 40.0 35.0 41.0 25.0 41.0 38-39 35.604381867037496 39.0 35.0 41.0 24.0 41.0 40-41 35.44925055588148 39.0 35.0 41.0 23.0 41.0 42-43 35.35621482736892 39.0 35.0 41.0 23.0 41.0 44-45 35.2365999971029 39.0 35.0 41.0 23.0 41.0 46-47 35.11750157529931 39.0 35.0 41.0 23.0 41.0 48-49 35.01396312713209 38.0 35.0 40.5 23.0 41.0 50-51 34.78705502321303 38.0 34.5 40.0 22.5 41.0 52-53 34.58180149055907 38.0 34.0 40.0 22.0 41.0 54-55 34.379946077685794 37.0 34.0 40.0 21.0 41.0 56-57 34.09665638195395 37.0 34.0 40.0 20.0 41.0 58-59 33.83719571373733 36.5 34.0 40.0 20.0 41.0 60-61 33.491587177425785 36.0 33.0 39.5 19.0 41.0 62-63 33.12631564652456 35.0 33.0 39.0 18.0 40.5 64-65 32.767804322476444 35.0 33.0 39.0 17.5 40.0 66-67 32.43639339750415 35.0 32.5 38.0 16.0 40.0 68-69 31.942495237888302 35.0 32.0 37.0 13.5 40.0 70-71 31.646044550188677 35.0 32.0 37.0 11.5 39.0 72-73 31.397862300733692 35.0 31.5 36.0 11.0 39.0 74-75 31.109821719574995 35.0 31.0 36.0 10.0 38.5 76-77 29.23683846482556 33.0 28.0 34.5 10.0 36.0 78-79 30.330944129384584 34.0 30.5 35.0 10.0 37.0 80-81 30.420950213299147 34.0 31.0 35.0 10.0 36.5 82-83 30.243471742389673 34.0 31.0 35.0 10.0 36.0 84-85 30.0260900346928 34.0 30.0 35.0 10.0 36.0 86 29.601394592558794 34.0 29.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 7.0 9 14.0 10 21.0 11 30.0 12 58.0 13 178.0 14 554.0 15 1662.0 16 4302.0 17 10278.0 18 23780.0 19 40874.0 20 51600.0 21 51589.0 22 43068.0 23 33004.0 24 26814.0 25 24896.0 26 26117.0 27 29343.0 28 34678.0 29 41962.0 30 51653.0 31 64091.0 32 78117.0 33 98985.0 34 208886.0 35 215826.0 36 245271.0 37 440356.0 38 636099.0 39 276711.0 40 555.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.741346717945376 21.52438273616815 26.427836806234563 19.30643373965191 2 37.15374196959491 23.861257776908648 26.759084226002937 12.2259160274935 3 27.84546132730736 23.78897507767855 35.82335643772317 12.54220715729092 4 25.363622536557806 25.031035207034165 36.026588155197764 13.578754101210263 5 22.6005475523108 29.100268706226593 34.12004142856108 14.179142312901522 6 20.622695898427597 38.58118042428062 31.02908690582245 9.767036771469337 7 79.99398851298987 3.7668484598280574 13.988657844990549 2.250505182191513 8 80.44039574415692 4.16320825094699 13.290890786490813 2.1055052184052903 9 75.62305803619928 6.241372067589394 14.463963670338744 3.671606225872571 10-11 31.664294664262073 29.461066568165194 26.379962192816635 12.4946765747561 12-13 25.784299879045985 22.17116079641339 34.44873577703902 17.595803547501614 14-15 17.46407593304797 27.860634899941335 36.57528119997972 18.100007967030976 16-17 22.735280910269502 27.12958738022293 33.70582824529764 16.429303464209923 18-19 22.264556127733233 27.753713722848723 32.84502676198133 17.136703387436718 20-21 24.972767239568622 26.327886781247056 33.26153952009502 15.437806459089295 22-23 22.007474523607762 23.287939363651507 36.203963235773415 18.500622876967313 24-25 20.467411221925268 27.0314480440939 34.6772990316436 17.823841702337237 26-27 19.327854188847603 29.272139292672506 33.294439736653416 18.10556678182648 28-29 18.35531509607515 27.582494984391865 35.68717452867769 18.3750153908553 30-31 21.26114478992388 26.07529568549059 33.796887787990066 18.86667173659547 32-33 22.715562508600772 26.564724883934844 32.39822117926544 18.321491428198943 34-35 20.504874374407002 27.397297727947624 32.071772084972004 20.026055812673373 36-37 21.193117209511186 29.202282916512758 30.768365817091453 18.836234056884603 38-39 20.90824153140821 29.030883109170052 29.98211039407832 20.078764965343414 40-41 20.680330124792675 27.422122272197235 31.125325018650095 20.772222584359994 42-43 20.48416009386611 27.809627794798253 30.33740376188717 21.368808349448464 44-45 20.564464144739226 28.13821350194468 30.384155748212848 20.913166605103246 46-47 20.671385321831835 28.610930042225263 30.528159833126917 20.189524802815985 48-49 20.559158826383907 27.392626150692767 31.64709312010661 20.40112190281671 50-51 19.42371205701497 27.757027283459717 31.994636739601212 20.824623919924097 52-53 20.47010914832439 26.393488038589403 31.507670078004473 21.628732735081734 54-55 19.845186102600874 26.540389225677018 32.652224612331516 20.962200059390597 56-57 20.652246340597816 27.460074310670752 30.652246340597816 21.235433008133615 58-59 21.01974375131275 28.29806111437035 30.28789952849662 20.39429560582028 60-61 21.74237156783927 29.265312995676073 29.17191766435623 19.82039777212843 62-63 21.435930585431922 27.790887165113094 30.58516031839153 20.188021931063453 64-65 21.089672555026834 29.656530430436955 29.065756976584172 20.18804003795204 66-67 20.265428879763018 30.021076418312582 28.177088991736017 21.536405710188383 68-69 19.823240553636225 30.737185754948616 28.73139517197923 20.708178519435936 70-71 20.120320274645287 29.7188181271683 29.611969377630025 20.54889222055639 72-73 20.781022532212155 30.58525085283445 28.556247238699488 20.0774793762539 74-75 19.585859244290898 30.7470177954501 28.061548935677088 21.605574024581912 76-77 20.54492681195634 29.13260760923886 28.991717909161363 21.330747669643436 78-79 19.5952023988006 29.18535297568607 28.92278498431943 22.296659641193894 80-81 18.829842325214205 29.229298394281123 29.212839232557634 22.72802004794704 82-83 20.139730859208075 29.715631314777397 28.708055392593558 21.43658243342097 84-85 18.811590581520836 29.40996892857919 28.65677668412171 23.12166380577827 86 19.487068060172813 29.225314878792485 28.94433218173522 22.34328487929948 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1393.0 1 1539.0 2 14854.5 3 18135.5 4 8583.5 5 9813.5 6 11235.5 7 11764.0 8 12179.0 9 12931.0 10 13308.5 11 13414.0 12 13635.0 13 13913.0 14 14035.0 15 14101.5 16 14135.5 17 14080.0 18 14281.0 19 14266.0 20 14618.5 21 15210.0 22 15216.5 23 16088.5 24 17428.5 25 19874.0 26 23246.0 27 26786.0 28 32814.0 29 36703.0 30 40937.5 31 46420.0 32 49313.0 33 54267.0 34 61008.0 35 68478.5 36 72517.0 37 74419.5 38 81325.5 39 87933.0 40 93764.5 41 101806.5 42 109386.5 43 113152.0 44 113406.0 45 114859.5 46 118894.5 47 120072.0 48 121120.0 49 123263.0 50 122700.0 51 112093.0 52 96886.0 53 88144.5 54 81978.5 55 77190.0 56 69768.0 57 65110.0 58 59645.5 59 48234.0 60 37912.5 61 31565.5 62 27081.5 63 21502.0 64 18434.0 65 15052.0 66 9950.0 67 6983.0 68 5259.5 69 3903.5 70 2378.0 71 1732.0 72 1474.0 73 1021.5 74 574.5 75 267.0 76 188.0 77 140.0 78 110.5 79 105.0 80 75.0 81 50.0 82 40.0 83 22.5 84 14.0 85 8.0 86 8.0 87 7.0 88 6.0 89 3.5 90 0.5 91 0.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2761380.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 21.45776885953842 #Duplication Level Percentage of deduplicated Percentage of total 1 79.12312504331776 16.97805728623868 2 6.3164751855851895 2.7107492907859405 3 2.3785483191089893 1.5311502015805298 4 1.3657577481053598 1.1722445630787404 5 0.9110230861265313 0.9774261403903233 6 0.6967664401748533 0.8970631933413242 7 0.5347199603116839 0.8031728119064768 8 0.4529138698980426 0.7774816906841003 9 0.3820105421712472 0.7377384524235818 >10 5.507265022047 28.965139084376318 >50 1.8566083961315618 28.04657962323323 >100 0.46792800888644037 13.0718124019324 >500 0.004800864694709441 0.7205590440170361 >1k 0.0018860539872072807 0.6611409763076915 >5k 0.0 0.0 >10k+ 1.7145945338248005E-4 1.9496852397035893 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 52993 1.9190766935372892 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.242755433877264E-5 0.0 0.0 0.0153546415198198 0.0 2 7.242755433877264E-5 0.0 0.0 0.05229269423259385 0.0 3 7.242755433877264E-5 0.0 0.0 0.0969080677052778 0.0 4 7.242755433877264E-5 0.0 0.0 0.17469526106511962 0.0 5 7.242755433877264E-5 0.0 0.0 0.39353511649972117 0.0 6 7.242755433877264E-5 0.0 0.0 0.6582216138307658 0.0 7 7.242755433877264E-5 0.0 0.0 0.8341843570968139 0.0 8 7.242755433877264E-5 0.0 0.0 1.066206027421072 0.0 9 7.242755433877264E-5 0.0 0.0 1.2255466469663718 0.0 10 7.242755433877264E-5 0.0 0.0 1.470206925522746 3.621377716938632E-5 11 7.242755433877264E-5 0.0 0.0 1.6627917925095423 3.621377716938632E-5 12 7.242755433877264E-5 0.0 0.0 1.83937016998747 3.621377716938632E-5 13 7.242755433877264E-5 0.0 0.0 1.908176346609304 3.621377716938632E-5 14 7.242755433877264E-5 0.0 0.0 1.9518139480984145 3.621377716938632E-5 15 7.242755433877264E-5 0.0 0.0 2.0011008988259493 3.621377716938632E-5 16 7.242755433877264E-5 0.0 0.0 2.066430552839522 3.621377716938632E-5 17 7.242755433877264E-5 0.0 0.0 2.135997218781913 3.621377716938632E-5 18 7.242755433877264E-5 0.0 0.0 2.2222584359993918 3.621377716938632E-5 19 7.242755433877264E-5 0.0 0.0 2.299719705364709 3.621377716938632E-5 20 7.242755433877264E-5 0.0 0.0 2.3746460103281692 3.621377716938632E-5 21 7.242755433877264E-5 0.0 0.0 2.4625730612954393 3.621377716938632E-5 22 7.242755433877264E-5 0.0 0.0 2.5669049533204413 3.621377716938632E-5 23 7.242755433877264E-5 0.0 0.0 2.6695710115956515 3.621377716938632E-5 24 7.242755433877264E-5 0.0 0.0 2.7525367750907157 3.621377716938632E-5 25 7.242755433877264E-5 0.0 0.0 2.8268836596194657 3.621377716938632E-5 26 7.242755433877264E-5 0.0 0.0 2.8977540215399546 3.621377716938632E-5 27 7.242755433877264E-5 0.0 0.0 2.982095908567455 3.621377716938632E-5 28 7.242755433877264E-5 0.0 0.0 3.0677777053502235 3.621377716938632E-5 29 7.242755433877264E-5 0.0 0.0 3.1685606472126255 3.621377716938632E-5 30 7.242755433877264E-5 0.0 0.0 3.2791575226879313 3.621377716938632E-5 31 1.0864133150815897E-4 0.0 0.0 3.3805923125393824 3.621377716938632E-5 32 1.0864133150815897E-4 0.0 0.0 3.482606522825544 3.621377716938632E-5 33 1.0864133150815897E-4 0.0 0.0 3.5790438114276197 3.621377716938632E-5 34 1.0864133150815897E-4 0.0 0.0 3.689785542011603 3.621377716938632E-5 35 1.0864133150815897E-4 0.0 0.0 3.8071906075947535 3.621377716938632E-5 36 1.4485510867754528E-4 0.0 0.0 3.919091179048157 3.621377716938632E-5 37 1.810688858469316E-4 0.0 0.0 4.037111878843187 3.621377716938632E-5 38 1.810688858469316E-4 0.0 0.0 4.183777676379202 3.621377716938632E-5 39 1.810688858469316E-4 0.0 0.0 4.430067574908198 3.621377716938632E-5 40 1.810688858469316E-4 0.0 0.0 4.57926833684607 3.621377716938632E-5 41 1.810688858469316E-4 0.0 0.0 4.728432885006772 3.621377716938632E-5 42 1.810688858469316E-4 0.0 0.0 4.87136866349434 3.621377716938632E-5 43 1.810688858469316E-4 0.0 0.0 5.007532465651233 3.621377716938632E-5 44 1.810688858469316E-4 0.0 0.0 5.138155559901209 3.621377716938632E-5 45 1.810688858469316E-4 0.0 0.0 5.260087347630533 3.621377716938632E-5 46 1.810688858469316E-4 0.0 0.0 5.412040356633278 3.621377716938632E-5 47 1.810688858469316E-4 0.0 0.0 5.577283821857187 3.621377716938632E-5 48 1.810688858469316E-4 0.0 0.0 5.732496070805177 3.621377716938632E-5 49 1.810688858469316E-4 0.0 0.0 5.891438338801613 3.621377716938632E-5 50 1.810688858469316E-4 0.0 0.0 6.042377362043616 3.621377716938632E-5 51 2.1728266301631794E-4 0.0 0.0 6.2080191788163885 3.621377716938632E-5 52 2.1728266301631794E-4 0.0 0.0 6.394483917461559 3.621377716938632E-5 53 2.1728266301631794E-4 0.0 0.0 6.5494788837465325 3.621377716938632E-5 54 2.1728266301631794E-4 0.0 0.0 6.708783289514663 3.621377716938632E-5 55 2.5349644018570427E-4 0.0 0.0 6.857259775909147 3.621377716938632E-5 56 2.5349644018570427E-4 0.0 0.0 7.008379868036996 3.621377716938632E-5 57 2.8971021735509057E-4 0.0 0.0 7.166199508941181 3.621377716938632E-5 58 2.8971021735509057E-4 0.0 0.0 7.321158261448986 3.621377716938632E-5 59 2.8971021735509057E-4 0.0 0.0 7.484156472488394 3.621377716938632E-5 60 2.8971021735509057E-4 0.0 0.0 7.65428879763017 3.621377716938632E-5 61 2.8971021735509057E-4 0.0 0.0 7.836118172797659 3.621377716938632E-5 62 3.2592399452447687E-4 0.0 0.0 8.057492992634117 3.621377716938632E-5 63 3.2592399452447687E-4 0.0 0.0 8.265722211358089 3.621377716938632E-5 64 3.2592399452447687E-4 0.0 0.0 8.459900484540338 3.621377716938632E-5 65 3.2592399452447687E-4 0.0 0.0 8.638434405985413 3.621377716938632E-5 66 3.2592399452447687E-4 0.0 0.0 8.831634907184089 3.621377716938632E-5 67 3.621377716938632E-4 0.0 0.0 9.014405840557982 3.621377716938632E-5 68 3.621377716938632E-4 0.0 0.0 9.220679515314806 3.621377716938632E-5 69 3.621377716938632E-4 0.0 0.0 9.495035091150077 3.621377716938632E-5 70 3.621377716938632E-4 0.0 0.0 9.700113711260311 3.621377716938632E-5 71 3.621377716938632E-4 0.0 0.0 9.903345428734909 3.621377716938632E-5 72 3.621377716938632E-4 0.0 0.0 10.088216761184626 3.621377716938632E-5 73 3.621377716938632E-4 0.0 0.0 10.278266663769564 3.621377716938632E-5 74 3.983515488632495E-4 0.0 0.0 10.49391970681326 3.621377716938632E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 27535 0.0 76.10677 1 TACGGGA 1410 0.0 64.680855 4 TAGGGAT 4880 0.0 64.42623 5 TAGCGGG 1610 0.0 64.347824 3 ACGGGAC 1125 0.0 64.0 5 ACGGGAT 1515 0.0 63.366333 5 CGAGGGA 2085 0.0 62.541965 4 GTAGGGA 4680 0.0 62.22222 4 TAGGGAC 3470 0.0 61.902016 5 ATAGGGA 3845 0.0 61.274387 4 TAAGGGA 3940 0.0 61.218273 4 CCGATCC 2300 0.0 61.217392 80 AGGGATC 3085 0.0 60.940037 6 CGGGATA 880 0.0 60.0 6 GGGCGAT 1615 0.0 59.690395 7 AGGGATT 5115 0.0 59.58944 6 GCGGGAT 1890 0.0 59.259262 5 TTAGCGG 710 0.0 59.15493 2 AGTAGGG 4515 0.0 59.00332 3 ATAGCGG 450 0.0 58.666668 2 >>END_MODULE