##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547827_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1912100 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.054122169342605 33.0 31.0 34.0 31.0 34.0 2 32.47569530882276 34.0 31.0 34.0 31.0 34.0 3 32.578364625281104 34.0 31.0 34.0 31.0 34.0 4 36.107545107473456 37.0 35.0 37.0 35.0 37.0 5 36.06969876052508 37.0 35.0 37.0 35.0 37.0 6 36.127303488311284 37.0 36.0 37.0 35.0 37.0 7 36.36615030594634 37.0 37.0 37.0 35.0 37.0 8 36.37593588201454 37.0 37.0 37.0 35.0 37.0 9 38.177970817425866 39.0 39.0 39.0 37.0 39.0 10-11 37.71670728518383 39.0 37.5 39.0 35.0 39.0 12-13 37.08899586841692 39.0 35.0 39.0 33.5 39.0 14-15 38.29805371057999 40.0 37.0 41.0 33.5 41.0 16-17 38.444144134720986 40.0 36.5 41.0 34.0 41.0 18-19 38.319754196956225 40.0 36.0 41.0 34.0 41.0 20-21 38.127057946760104 40.0 35.0 41.0 34.0 41.0 22-23 37.93341221693426 40.0 35.0 41.0 34.0 41.0 24-25 37.92962528110455 40.0 35.0 41.0 34.0 41.0 26-27 37.88941007269494 40.0 35.0 41.0 34.0 41.0 28-29 37.83322551121803 40.0 35.0 41.0 34.0 41.0 30-31 37.69253935463627 40.0 35.5 41.0 33.5 41.0 32-33 37.375764081376495 40.0 35.0 41.0 33.0 41.0 34-35 37.073689922075204 40.0 35.0 41.0 32.5 41.0 36-37 36.87899691438732 40.0 35.0 41.0 31.5 41.0 38-39 36.785034778515765 40.0 35.0 41.0 31.0 41.0 40-41 36.69070550703415 40.0 35.0 41.0 31.0 41.0 42-43 36.651158150724335 39.5 35.0 41.0 31.0 41.0 44-45 36.52057476073427 39.0 35.0 41.0 31.0 41.0 46-47 36.379495580775064 39.0 35.0 41.0 31.0 41.0 48-49 36.29044636786779 39.0 35.0 41.0 31.0 41.0 50-51 36.0689184666074 38.5 35.0 40.5 30.0 41.0 52-53 35.87747947283092 38.0 35.0 40.0 29.5 41.0 54-55 35.70156764813556 38.0 35.0 40.0 29.0 41.0 56-57 35.407459599393334 37.0 35.0 40.0 28.5 41.0 58-59 35.16251085194289 37.0 35.0 40.0 28.0 41.0 60-61 34.80428167982846 36.0 34.0 39.5 27.5 41.0 62-63 34.40829663720517 36.0 34.0 39.0 26.5 41.0 64-65 34.052767637675856 35.0 34.0 39.0 26.0 40.0 66-67 33.74995868416924 35.0 34.0 38.5 25.5 40.0 68-69 33.28850661576277 35.0 33.5 37.5 24.0 40.0 70-71 32.97752471105068 35.0 33.0 37.0 24.0 39.5 72-73 32.682780973798444 35.0 33.0 36.5 23.0 39.0 74-75 32.37201506197374 35.0 33.0 36.0 22.5 38.5 76-77 30.405027718215575 33.0 30.0 34.5 19.5 36.0 78-79 31.421702316824433 34.0 31.5 35.0 20.0 37.0 80-81 31.56263950630197 35.0 32.0 35.0 20.0 37.0 82-83 31.368221327336435 35.0 32.0 35.0 19.0 36.0 84-85 31.147766591705455 34.0 32.0 35.0 18.5 36.0 86 30.741812143716334 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 2.0 10 7.0 11 14.0 12 23.0 13 70.0 14 221.0 15 615.0 16 1800.0 17 4391.0 18 9550.0 19 14525.0 20 16474.0 21 15925.0 22 13723.0 23 12136.0 24 12118.0 25 13486.0 26 16022.0 27 19340.0 28 23800.0 29 29680.0 30 37562.0 31 47095.0 32 57429.0 33 73365.0 34 182733.0 35 176130.0 36 156250.0 37 295369.0 38 461334.0 39 220366.0 40 542.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.62303226818681 24.664400397468754 29.8682600282412 13.844307306103238 2 29.39882851315308 26.345693216881962 31.619319073270226 12.636159196694733 3 28.50091522409916 25.5104335547304 33.38408033052664 12.604570890643796 4 26.191307985983997 27.976413367501703 32.21322106584384 13.619057580670468 5 23.73170859264683 32.51650018304482 30.42607604204801 13.325715182260343 6 21.155274305737148 41.49563307358402 26.845457873542177 10.503634747136656 7 89.21322106584384 2.885100151665708 6.597405993410386 1.3042727890800692 8 90.2854453218974 2.5292610219130798 5.884420270906333 1.3008733852831964 9 86.00052298519952 5.179227027875111 6.800167355263846 2.020082631661524 10-11 37.715417603681814 30.022357617279432 20.619449819570107 11.642774959468646 12-13 27.40868678416401 26.053841326290467 29.689843627425343 16.847628262120182 14-15 16.210579990586265 32.361199728047694 34.490507818628735 16.937712462737302 16-17 21.15255478269965 27.482296950996286 32.353930233774385 19.01121803252968 18-19 22.791721144291614 29.128262120181997 30.29177344281157 17.788243292714817 20-21 25.937973955337064 27.81567386642958 30.016081794885203 16.23027038334815 22-23 20.906751738925788 25.315961508289313 32.8459808587417 20.9313058940432 24-25 19.504759165315622 28.637335913393652 33.660765650332095 18.197139270958633 26-27 18.323309450342556 34.20124470477485 29.907013231525546 17.56843261335704 28-29 16.83740390146959 29.115971967993303 36.05407666963025 17.992547460906856 30-31 21.75830239004236 29.0436954134198 30.894696930076883 18.30330526646096 32-33 24.02225302023953 28.923173474190676 29.1616285759113 17.89294492965849 34-35 19.56618377699911 28.85968307096909 30.78113069400136 20.793002458030436 36-37 21.848648083259246 29.99550232728414 30.2120704984049 17.943779091051724 38-39 19.524841796977146 31.472987814444853 28.4299984310444 20.5721719575336 40-41 20.37908582187124 28.27203075152973 29.574917629831077 21.773965796767953 42-43 20.80696616285759 28.058809685685894 28.503582448616704 22.63064170283981 44-45 19.74381570001569 31.16738141310601 28.67930547565504 20.409497411223263 46-47 20.786072904136812 30.38251137492809 28.457742795878875 20.373672925056223 48-49 20.9806495476178 28.06704670257832 30.81583076198944 20.136472987814443 50-51 18.995057789864546 31.445871031849798 29.079519899586842 20.479551278698814 52-53 21.709743214267036 27.40233251398985 30.305344908739084 20.58257936300403 54-55 21.158255321374405 28.285916008576955 30.531640604570892 20.024188065477748 56-57 21.624418178965534 26.731943935986614 30.311646880393283 21.33199100465457 58-59 22.235317190523507 28.198917420637 29.07674807802939 20.489017310810105 60-61 22.90790230636473 30.249411641650543 27.38742743580357 19.455258616181162 62-63 22.45855342293813 27.829062287537266 30.51320537628785 19.199178913236757 64-65 20.066262224779038 31.040296009622924 29.726217248051878 19.167224517546153 66-67 18.847157575440615 30.74690131269285 27.146462005125255 23.259479106741278 68-69 18.570969091574707 32.483081428795565 26.806626222477902 22.139323257151823 70-71 19.80330526646096 30.628758956121544 28.67376183254014 20.89417394487736 72-73 22.030045499712358 30.667407562365984 27.29329009989017 20.009256838031483 74-75 20.931593535902934 31.91896344333455 26.27365200564824 20.875791015114274 76-77 23.677998012656243 29.785471471157365 27.10551226400293 19.431018252183463 78-79 19.065007060300193 30.594895664452697 29.4854348621934 20.85466241305371 80-81 17.333063124313583 30.067125150358244 29.979368233878983 22.62044349144919 82-83 19.3710841483186 28.975053605982954 30.429004759165316 21.22485748653313 84-85 17.976622561581507 29.008472360232208 29.13443334553632 23.880471732649966 86 18.503530150096754 28.62664086606349 30.880602478949847 21.98922650488991 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 815.0 1 1021.5 2 4793.5 3 5211.0 4 2224.0 5 2799.0 6 3696.5 7 4180.0 8 4498.0 9 4896.0 10 4933.0 11 4601.5 12 4403.5 13 4531.0 14 4568.0 15 4492.5 16 4603.5 17 5091.0 18 5452.0 19 5459.0 20 5868.0 21 6330.0 22 6967.0 23 8538.0 24 9777.0 25 10878.5 26 13066.0 27 17709.0 28 22025.0 29 23089.0 30 27940.5 31 33805.5 32 36766.5 33 42555.5 34 49689.0 35 55906.0 36 58831.0 37 60027.5 38 64482.0 39 70813.5 40 77710.5 41 85368.5 42 93517.0 43 97831.0 44 100494.5 45 104151.0 46 106543.5 47 110708.0 48 110668.5 49 98502.0 50 89140.0 51 79544.0 52 65338.5 53 55347.5 54 47352.5 55 40891.0 56 33648.0 57 30253.0 58 26189.5 59 18986.0 60 14464.5 61 11102.5 62 7877.5 63 5505.0 64 4377.0 65 3404.5 66 1897.5 67 1060.5 68 660.5 69 457.5 70 289.0 71 226.0 72 184.5 73 138.0 74 87.5 75 28.5 76 16.5 77 12.5 78 7.5 79 8.0 80 5.0 81 2.0 82 2.5 83 2.5 84 1.0 85 1.5 86 3.0 87 1.5 88 0.0 89 0.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1912100.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.564295920257425 #Duplication Level Percentage of deduplicated Percentage of total 1 79.03233880021402 14.671797247572158 2 8.142079962602104 3.023039636642879 3 2.7504641475287737 1.531812910583482 4 1.4503039887162883 1.0769548968343545 5 0.8517455944955797 0.7906028632495765 6 0.5548021847941285 0.6179707161434128 7 0.44534041101642713 0.5787201822750616 8 0.3386804440738781 0.5029891188953336 9 0.2970704926644782 0.49634140815000327 >10 3.394783263988457 15.18132855028044 >50 1.3030769119847414 17.59729354500302 >100 1.4322179894124871 42.273317028220795 >500 0.0062443114876135075 0.767504033287157 >1k 5.67664680692137E-4 0.12466803122047326 >5k 0.0 0.0 >10k+ 2.838323403460685E-4 0.7656598316418837 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14531 0.7599497934208461 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0459703990377072E-4 0.0 0.0 0.028921081533392606 0.0 2 1.0459703990377072E-4 0.0 0.0 0.11212802677684222 0.0 3 1.0459703990377072E-4 0.0 0.0 0.1718529365618953 0.0 4 1.0459703990377072E-4 0.0 0.0 0.3064170283980963 0.0 5 1.0459703990377072E-4 0.0 0.0 0.6075519062810523 0.0 6 1.0459703990377072E-4 0.0 0.0 0.824381570001569 0.0 7 1.0459703990377072E-4 0.0 0.0 1.01914125830239 0.0 8 1.0459703990377072E-4 0.0 0.0 1.3468437843209038 0.0 9 1.0459703990377072E-4 0.0 0.0 1.459024109617698 0.0 10 1.0459703990377072E-4 0.0 0.0 1.708069661628576 0.0 11 1.0459703990377072E-4 0.0 0.0 2.044139950839391 0.0 12 1.0459703990377072E-4 0.0 0.0 2.372208566497568 0.0 13 1.0459703990377072E-4 0.0 0.0 2.460226975576591 0.0 14 1.0459703990377072E-4 0.0 0.0 2.5038439412164637 0.0 15 1.0459703990377072E-4 0.0 0.0 2.555514878928926 0.0 16 1.0459703990377072E-4 0.0 0.0 2.667538308665865 0.0 17 1.0459703990377072E-4 0.0 0.0 2.8228649129229644 0.0 18 1.0459703990377072E-4 0.0 0.0 3.012865435908164 0.0 19 1.0459703990377072E-4 0.0 0.0 3.158726008053972 0.0 20 1.0459703990377072E-4 0.0 0.0 3.2963757125673343 0.0 21 1.0459703990377072E-4 0.0 0.0 3.4707389780869202 0.0 22 1.0459703990377072E-4 0.0 0.0 3.6713038021024005 0.0 23 1.0459703990377072E-4 0.0 0.0 3.8720778201976884 0.0 24 1.0459703990377072E-4 0.0 0.0 4.015741854505517 0.0 25 1.0459703990377072E-4 0.0 0.0 4.140996809790283 0.0 26 1.0459703990377072E-4 0.0 0.0 4.262486271638513 0.0 27 1.0459703990377072E-4 0.0 0.0 4.3938601537576485 0.0 28 1.0459703990377072E-4 0.0 0.0 4.533183410909471 0.0 29 1.0459703990377072E-4 0.0 0.0 4.6950996286805085 0.0 30 1.0459703990377072E-4 0.0 0.0 4.884629464986141 0.0 31 1.0459703990377072E-4 0.0 0.0 5.05768526750693 0.0 32 1.0459703990377072E-4 0.0 0.0 5.212279692484703 0.0 33 1.0459703990377072E-4 0.0 0.0 5.368129281941321 0.0 34 1.0459703990377072E-4 0.0 0.0 5.5295225145128395 0.0 35 1.0459703990377072E-4 0.0 0.0 5.718110977459338 0.0 36 1.0459703990377072E-4 0.0 0.0 5.8897024214214735 0.0 37 1.0459703990377072E-4 0.0 0.0 6.076042048010041 0.0 38 1.0459703990377072E-4 0.0 0.0 6.272056900789708 0.0 39 1.0459703990377072E-4 0.0 0.0 6.552063176612102 0.0 40 1.0459703990377072E-4 0.0 0.0 6.757177971863396 0.0 41 1.5689555985565608E-4 0.0 0.0 6.971078918466607 0.0 42 1.5689555985565608E-4 0.0 0.0 7.180116102714293 0.0 43 1.5689555985565608E-4 0.0 0.0 7.378955075571361 0.0 44 1.5689555985565608E-4 0.0 0.0 7.574656137231316 0.0 45 1.5689555985565608E-4 0.0 0.0 7.774122692327807 0.0 46 1.5689555985565608E-4 0.0 0.0 7.993358087966111 0.0 47 1.5689555985565608E-4 0.0 0.0 8.214110140683019 0.0 48 2.0919407980754144E-4 0.0 0.0 8.429004759165316 0.0 49 2.0919407980754144E-4 0.0 0.0 8.658072276554574 0.0 50 2.0919407980754144E-4 0.0 0.0 8.882328330108258 0.0 51 2.0919407980754144E-4 0.0 0.0 9.115893520213378 0.0 52 2.0919407980754144E-4 0.0 0.0 9.370064327179541 0.0 53 2.0919407980754144E-4 0.0 0.0 9.611840384917107 0.0 54 2.0919407980754144E-4 0.0 0.0 9.849641755138329 0.0 55 2.0919407980754144E-4 0.0 0.0 10.089273573557868 0.0 56 2.614925997594268E-4 0.0 0.0 10.334187542492547 0.0 57 2.614925997594268E-4 0.0 0.0 10.580722765545735 0.0 58 2.614925997594268E-4 0.0 0.0 10.819308613566236 0.0 59 2.614925997594268E-4 0.0 0.0 11.067726583337691 0.0 60 2.614925997594268E-4 0.0 0.0 11.321845091783903 0.0 61 2.614925997594268E-4 0.0 0.0 11.58616181162073 0.0 62 2.614925997594268E-4 0.0 0.0 11.877882955912348 0.0 63 2.614925997594268E-4 0.0 0.0 12.18670571622823 0.0 64 2.614925997594268E-4 0.0 0.0 12.465561424611684 0.0 65 2.614925997594268E-4 0.0 0.0 12.739291878039852 0.0 66 2.614925997594268E-4 0.0 0.0 13.004916060875477 0.0 67 2.614925997594268E-4 0.0 0.0 13.277077558705088 0.0 68 2.614925997594268E-4 0.0 0.0 13.577375660268814 0.0 69 2.614925997594268E-4 0.0 0.0 13.954761780241618 0.0 70 2.614925997594268E-4 0.0 0.0 14.232623816745987 0.0 71 2.614925997594268E-4 0.0 0.0 14.513100779247948 0.0 72 2.614925997594268E-4 0.0 0.0 14.807593745097014 0.0 73 2.614925997594268E-4 0.0 0.0 15.099262590868678 0.0 74 2.614925997594268E-4 0.0 0.0 15.409288217143455 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCGCGAC 15 0.0013099249 80.0 9 CGTTTTT 7155 0.0 74.35359 1 CAGCGCG 120 0.0 70.0 1 ACGGGAT 1340 0.0 69.25373 5 TATCGGG 150 0.0 66.666664 3 CGTAAGG 340 0.0 65.882355 2 TACGGGA 1320 0.0 65.757576 4 CGGGTAG 140 0.0 65.71429 6 AGCGGGA 1730 0.0 65.433525 4 CGGGACG 105 0.0 64.76191 6 TAGGGGT 2875 0.0 64.13913 5 TCGGTCG 25 1.2357357E-4 64.0 2 ATAGGGA 3545 0.0 63.977432 4 TATCGCG 70 0.0 62.857143 1 TCGATAG 185 0.0 62.7027 1 TCGAGCG 115 0.0 62.608696 1 TAGGGAC 2655 0.0 62.52354 5 CCGATCC 1440 0.0 61.944447 80 AGGGATC 2770 0.0 61.805054 6 GTACGGG 745 0.0 61.744965 3 >>END_MODULE