##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547823_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3137358 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.18748290759295 33.0 31.0 34.0 31.0 34.0 2 32.63231068943997 34.0 31.0 34.0 31.0 34.0 3 32.71891062479959 34.0 31.0 34.0 31.0 34.0 4 36.235647318539996 37.0 37.0 37.0 35.0 37.0 5 36.2206911037886 37.0 37.0 37.0 35.0 37.0 6 36.282210382111316 37.0 37.0 37.0 35.0 37.0 7 36.45522315272915 37.0 37.0 37.0 35.0 37.0 8 36.46276357368206 37.0 37.0 37.0 35.0 37.0 9 38.291889545279815 39.0 39.0 39.0 37.0 39.0 10-11 37.91855503898503 39.0 38.0 39.0 35.0 39.0 12-13 37.42324178496684 39.0 37.0 39.0 35.0 39.0 14-15 38.69695536817922 40.0 38.0 41.0 35.0 41.0 16-17 38.81081183594604 40.5 38.0 41.0 35.0 41.0 18-19 38.59445798024963 40.0 37.5 41.0 35.0 41.0 20-21 38.384212608188164 40.0 36.0 41.0 35.0 41.0 22-23 38.22481129026397 40.0 35.0 41.0 34.0 41.0 24-25 38.20842696306892 40.0 35.0 41.0 34.0 41.0 26-27 38.20228039006068 40.0 35.0 41.0 34.5 41.0 28-29 38.096649473856665 40.0 36.0 41.0 34.0 41.0 30-31 37.907684108730976 40.0 35.5 41.0 34.0 41.0 32-33 37.505811099657734 40.0 35.0 41.0 33.0 41.0 34-35 37.09858820702004 40.0 35.0 41.0 32.5 41.0 36-37 36.88010214326832 40.0 35.0 41.0 31.5 41.0 38-39 36.780496519683126 40.0 35.0 41.0 31.0 41.0 40-41 36.662346471139095 40.0 35.0 41.0 31.0 41.0 42-43 36.615002176990956 40.0 35.0 41.0 31.0 41.0 44-45 36.49010983126567 40.0 35.0 41.0 31.0 41.0 46-47 36.38924933016889 39.0 35.0 41.0 30.0 41.0 48-49 36.297856349195726 39.0 35.0 41.0 30.0 41.0 50-51 36.07579259364089 39.0 35.0 41.0 29.5 41.0 52-53 35.89471555366012 39.0 35.0 40.0 29.0 41.0 54-55 35.71832860642617 38.0 35.0 40.0 29.0 41.0 56-57 35.45435522500142 38.0 35.0 40.0 28.5 41.0 58-59 35.21051518506973 37.0 35.0 40.0 28.0 41.0 60-61 34.87804914198507 37.0 34.5 40.0 27.0 41.0 62-63 34.52236786493604 36.0 34.0 39.5 26.0 41.0 64-65 34.196677108573525 36.0 34.0 39.0 26.0 40.5 66-67 33.880723844712655 35.0 34.0 39.0 25.5 40.0 68-69 33.39681445343503 35.0 34.0 38.0 24.0 40.0 70-71 33.107619213363606 35.0 33.5 37.0 24.0 39.5 72-73 32.849122892573945 35.0 33.0 37.0 23.5 39.0 74-75 32.538939292232506 35.0 33.0 36.0 23.0 39.0 76-77 30.590862120293572 33.5 30.0 34.5 19.5 36.0 78-79 31.660305741327576 34.5 32.0 35.0 20.0 37.0 80-81 31.761056277288088 35.0 33.0 35.0 20.0 37.0 82-83 31.578097558518984 35.0 33.0 35.0 19.5 36.5 84-85 31.34171793591933 35.0 32.0 35.0 19.0 36.0 86 30.909479249738155 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 5.0 10 19.0 11 23.0 12 34.0 13 74.0 14 295.0 15 891.0 16 2635.0 17 7595.0 18 18559.0 19 31639.0 20 36518.0 21 34471.0 22 27486.0 23 21179.0 24 17928.0 25 17971.0 26 19639.0 27 23965.0 28 29272.0 29 36522.0 30 47731.0 31 61423.0 32 79224.0 33 108280.0 34 266325.0 35 260221.0 36 257933.0 37 511070.0 38 817182.0 39 400350.0 40 897.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.17382778758433 23.500473965674303 30.54487246912848 15.780825777612883 2 31.97091310586806 24.84667035129558 30.58917726316219 12.59323927967417 3 27.830167931106363 24.44228551539225 35.21979321454548 12.507753338955899 4 26.104002157229107 26.57646975576265 34.0220338259134 13.297494261094844 5 22.707290656660795 31.767748532363854 32.05684528192192 13.468115529053426 6 21.330718394266768 39.78908368123753 28.92800247851855 9.952195445977157 7 87.77187684669713 2.940913979214358 8.199446795679677 1.0877623784088397 8 89.04514562890176 2.0850983534553595 7.770295898651031 1.0994601189918396 9 84.75554909576783 5.261752085672085 8.466040534742927 1.516658283817148 10-11 34.47701856147752 31.68471688599133 22.61291188318324 11.225352669347902 12-13 26.79230422540239 23.997165768139944 31.64960772726606 17.5609222791916 14-15 17.17668178129496 30.409471918729068 35.25603389858601 17.15781240138996 16-17 23.458862520630415 28.056967040420634 31.873362874112548 16.6108075648364 18-19 23.228636961417855 28.69666133096701 31.101041067037933 16.973660640577197 20-21 25.73917289643069 27.927861595648313 31.53291718700894 14.800048320912055 22-23 21.597583061926628 24.178863234606954 34.886806032336764 19.336747671129658 24-25 20.389129962216618 27.828462674645355 34.05805139228612 17.724355970851907 26-27 18.724018744434012 31.961016243603694 31.09222791916001 18.222737092802287 28-29 18.004145526267642 28.637423590167266 35.27005843770459 18.088372445860497 30-31 21.46323435196111 27.372585468410044 33.11623984256818 18.047940337060673 32-33 23.49970899081329 28.173514147891314 30.524951248789588 17.80182561250581 34-35 20.137580728753303 28.588481136038666 31.914145596390338 19.359792538817693 36-37 21.613440353316392 30.419336907040893 30.110621739693077 17.85660099994964 38-39 21.017636495420668 30.531453535108206 29.09830500695171 19.35260496251942 40-41 21.053494692030682 28.22706238816227 29.824776133294318 20.89466678651273 42-43 20.839971083950253 28.032599403702097 29.50528756998723 21.62214194236042 44-45 20.301763458298353 29.543759430705705 29.588574207980088 20.56590290301585 46-47 20.619562702120703 29.811213766487597 29.29345328139154 20.27577025000016 48-49 20.570429004276846 27.952452350034644 31.533076556771654 19.944042088916852 50-51 19.447732773881718 29.686506927166107 30.602691819040096 20.26306847991208 52-53 20.930461235217656 27.495379870579 30.93308127411663 20.64107762008671 54-55 20.567273482975164 27.807601172706462 31.436944715904275 20.1881806284141 56-57 21.02821864766469 27.639322640259735 30.279760868858446 21.05269784321713 58-59 21.69320491955333 29.371273536523407 29.578151425498778 19.357370118424484 60-61 22.77682368413168 29.43460708022483 28.353825097422735 19.434744138220758 62-63 21.25245190379931 27.709668453520447 30.944014039838613 20.093865602841625 64-65 20.16537481537013 30.09976865885245 29.858243783463667 19.876612742313757 66-67 20.51460177639912 29.76781738010135 28.31216584145004 21.405415002049494 68-69 19.72119534971782 30.760722875744495 28.402655992717442 21.115425781820246 70-71 19.808004059466597 29.836712928521386 29.911329851422757 20.44395316058926 72-73 20.982654832505567 30.952396889357225 28.135153846006734 19.929794432130475 74-75 20.375137297050575 31.47125702581599 27.589009606171818 20.56459607096162 76-77 21.82667709582394 28.97308818438954 28.632371568689326 20.567863151097196 78-79 19.60721409542679 29.609132907369833 29.30084803838134 21.48280495882204 80-81 18.89514999563327 29.38140945343184 29.513017003478726 22.21042354745617 82-83 19.667248685040086 29.539695501756576 29.74678057142347 21.046275241779867 84-85 18.747796713030517 29.07133964310098 29.121397685568557 23.059465958299945 86 19.56885379354221 29.29397920160849 29.478433764970397 21.658733239878906 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1105.0 1 1256.5 2 9759.0 3 11505.0 4 5349.0 5 6646.0 6 8051.5 7 8609.0 8 9186.0 9 9822.0 10 9923.0 11 10095.0 12 10141.0 13 10212.0 14 10367.0 15 10329.0 16 10107.0 17 9849.5 18 9961.5 19 10727.0 20 12046.5 21 12786.0 22 13379.5 23 15626.0 24 18717.5 25 22200.5 26 26728.0 27 32831.5 28 40127.0 29 43802.0 30 49842.5 31 56877.5 32 64042.5 33 73633.5 34 81162.5 35 90584.0 36 95897.0 37 97654.5 38 105296.0 39 114356.0 40 123903.5 41 135261.0 42 140737.0 43 141227.0 44 145285.0 45 147842.5 46 151320.0 47 158661.0 48 157052.0 49 144629.0 50 136178.0 51 126304.0 52 109415.0 53 95858.0 54 85444.0 55 79729.0 56 71295.5 57 64705.0 58 57284.0 59 42428.0 60 29409.5 61 20995.5 62 16605.0 63 11917.0 64 8789.0 65 6883.5 66 3820.5 67 2345.5 68 1584.0 69 984.0 70 666.5 71 505.0 72 412.5 73 263.5 74 137.5 75 75.5 76 73.0 77 44.5 78 30.5 79 35.0 80 29.5 81 18.0 82 11.5 83 9.0 84 6.5 85 4.0 86 2.0 87 1.0 88 0.5 89 0.5 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.5 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3137358.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.25470897853756 #Duplication Level Percentage of deduplicated Percentage of total 1 78.94803319261443 13.622253371664856 2 7.720361935584124 2.6642519681496606 3 2.5715833173738285 1.331157652660428 4 1.330125024540376 0.9180368081405728 5 0.8734960310078232 0.7535959904473805 6 0.6034219598173773 0.624712218474458 7 0.44747164674316464 0.5404695128490189 8 0.36843165621391477 0.508574480516136 9 0.30083886257616493 0.46717983208673824 >10 3.832828655179864 16.205075889950805 >50 1.4848217685368317 18.530529495148397 >100 1.5142787083653313 42.11891724400489 >500 0.0031836132434006157 0.36277950400557607 >1k 9.363568362942988E-4 0.22166806782562143 >5k 0.0 0.0 >10k+ 1.8727136725885975E-4 1.130797964075455 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 34995 1.115428969215499 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.187395254223458E-5 0.0 0.0 0.018518766427038293 0.0 2 3.187395254223458E-5 0.0 0.0 0.05683125738280426 0.0 3 3.187395254223458E-5 0.0 0.0 0.08841834435215873 0.0 4 3.187395254223458E-5 0.0 0.0 0.1474807784129194 0.0 5 6.374790508446916E-5 0.0 0.0 0.2958859014495636 0.0 6 6.374790508446916E-5 0.0 0.0 0.4560525129742924 0.0 7 6.374790508446916E-5 0.0 0.0 0.5669738678212687 0.0 8 6.374790508446916E-5 0.0 0.0 0.7457548676306625 0.0 9 6.374790508446916E-5 0.0 0.0 0.8339819682675678 0.0 10 6.374790508446916E-5 0.0 0.0 0.9653345266941166 0.0 11 6.374790508446916E-5 0.0 0.0 1.1600843767271698 0.0 12 6.374790508446916E-5 0.0 0.0 1.3096688360078768 0.0 13 6.374790508446916E-5 0.0 0.0 1.36720132034661 0.0 14 6.374790508446916E-5 0.0 0.0 1.3944854237227629 0.0 15 6.374790508446916E-5 0.0 0.0 1.4291642840887142 0.0 16 6.374790508446916E-5 0.0 0.0 1.4951433658511397 0.0 17 6.374790508446916E-5 0.0 0.0 1.5880559375117536 0.0 18 6.374790508446916E-5 0.0 0.0 1.7005391160332994 0.0 19 6.374790508446916E-5 0.0 0.0 1.7834751405481937 0.0 20 6.374790508446916E-5 0.0 0.0 1.8773439307850746 0.0 21 6.374790508446916E-5 0.0 0.0 1.9852691340930808 0.0 22 6.374790508446916E-5 0.0 0.0 2.116812936234883 0.0 23 6.374790508446916E-5 0.0 0.0 2.249026091380072 0.0 24 6.374790508446916E-5 0.0 0.0 2.349174050267773 0.0 25 6.374790508446916E-5 0.0 0.0 2.43599869699282 0.0 26 6.374790508446916E-5 0.0 0.0 2.5202734275144882 0.0 27 6.374790508446916E-5 0.0 0.0 2.6157996632835654 0.0 28 6.374790508446916E-5 0.0 0.0 2.7178600593238005 0.0 29 6.374790508446916E-5 0.0 0.0 2.8463439620215483 0.0 30 6.374790508446916E-5 0.0 0.0 2.9878643113090697 0.0 31 6.374790508446916E-5 0.0 0.0 3.105574818047542 0.0 32 6.374790508446916E-5 0.0 0.0 3.217834878901292 0.0 33 6.374790508446916E-5 0.0 0.0 3.337808436270263 0.0 34 6.374790508446916E-5 0.0 0.0 3.4675991710222425 0.0 35 6.374790508446916E-5 0.0 0.0 3.613358755997881 0.0 36 6.374790508446916E-5 0.0 0.0 3.7505442477396587 0.0 37 6.374790508446916E-5 0.0 0.0 3.899937463305112 0.0 38 6.374790508446916E-5 0.0 0.0 4.066606361148457 0.0 39 6.374790508446916E-5 0.0 0.0 4.327494662706647 0.0 40 6.374790508446916E-5 0.0 0.0 4.508506839193997 0.0 41 6.374790508446916E-5 0.0 0.0 4.685184158135603 0.0 42 6.374790508446916E-5 0.0 0.0 4.8591203171585775 0.0 43 6.374790508446916E-5 0.0 0.0 5.0191594328731375 0.0 44 6.374790508446916E-5 0.0 0.0 5.182640935462258 0.0 45 6.374790508446916E-5 0.0 0.0 5.347748009631034 0.0 46 6.374790508446916E-5 0.0 0.0 5.519452991976051 0.0 47 6.374790508446916E-5 0.0 0.0 5.707541185927777 0.0 48 6.374790508446916E-5 0.0 0.0 5.88817087498462 0.0 49 6.374790508446916E-5 0.0 0.0 6.069661160760105 0.0 50 6.374790508446916E-5 0.0 0.0 6.254816951077945 0.0 51 6.374790508446916E-5 0.0 0.0 6.451829851741497 0.0 52 6.374790508446916E-5 0.0 0.0 6.676349973448998 0.0 53 6.374790508446916E-5 0.0 0.0 6.87180105043798 0.0 54 6.374790508446916E-5 0.0 0.0 7.065945295372731 0.0 55 6.374790508446916E-5 0.0 0.0 7.2664643308159285 0.0 56 6.374790508446916E-5 0.0 0.0 7.472975669337067 0.0 57 6.374790508446916E-5 0.0 0.0 7.67400468802094 0.0 58 6.374790508446916E-5 0.0 0.0 7.8743962276539685 0.0 59 6.374790508446916E-5 0.0 0.0 8.087919835734398 0.0 60 6.374790508446916E-5 0.0 0.0 8.320376571624916 0.0 61 6.374790508446916E-5 0.0 0.0 8.552865181467974 0.0 62 9.562185762670374E-5 0.0 0.0 8.816717760612592 0.0 63 9.562185762670374E-5 0.0 0.0 9.079932860706364 0.0 64 9.562185762670374E-5 0.0 0.0 9.328549690535795 0.0 65 9.562185762670374E-5 0.0 0.0 9.562886989626303 0.0 66 9.562185762670374E-5 0.0 0.0 9.79862674262867 0.0 67 9.562185762670374E-5 0.0 0.0 10.030573495278512 0.0 68 9.562185762670374E-5 0.0 0.0 10.296912242721424 0.0 69 9.562185762670374E-5 0.0 0.0 10.66400455415034 0.0 70 9.562185762670374E-5 0.0 0.0 10.9344550414712 0.0 71 9.562185762670374E-5 0.0 0.0 11.1897654013345 3.187395254223458E-5 72 9.562185762670374E-5 0.0 0.0 11.437967869780879 3.187395254223458E-5 73 9.562185762670374E-5 0.0 0.0 11.689007120003518 3.187395254223458E-5 74 9.562185762670374E-5 0.0 0.0 11.972972163202288 3.187395254223458E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 18855 0.0 75.92681 1 TAACGCG 80 0.0 75.00001 1 CGAGGGA 2670 0.0 68.164795 4 CCGATCC 1675 0.0 68.0597 80 TAGGGAT 7215 0.0 65.91823 5 TACGGGA 1985 0.0 65.08816 4 GCGGGAT 2505 0.0 64.670654 5 ACGGGAT 2305 0.0 64.38178 5 AGGGATT 7215 0.0 63.75606 6 CGGGACT 1415 0.0 63.60424 6 CGGGATC 1455 0.0 63.505157 6 ACGGGAC 1425 0.0 63.157894 5 TAGGGAC 4330 0.0 62.817554 5 CGTAAGG 590 0.0 62.37288 2 ATAGGGA 5595 0.0 62.1269 4 TAAGGGA 5690 0.0 62.07381 4 GTACGGG 1265 0.0 61.97628 3 GCGTAAG 215 0.0 61.395348 1 GCGGGGT 2020 0.0 61.188118 5 CGGGATT 2010 0.0 61.094524 6 >>END_MODULE