##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547822_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2797015 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.02299701646219 33.0 31.0 34.0 31.0 34.0 2 32.45780305075232 34.0 31.0 34.0 31.0 34.0 3 32.58698362361303 34.0 31.0 34.0 31.0 34.0 4 36.10436340169788 37.0 35.0 37.0 35.0 37.0 5 36.06318271442949 37.0 35.0 37.0 35.0 37.0 6 36.126951410700336 37.0 36.0 37.0 35.0 37.0 7 36.34578506014448 37.0 37.0 37.0 35.0 37.0 8 36.35258445163862 37.0 37.0 37.0 35.0 37.0 9 38.14881579112018 39.0 39.0 39.0 37.0 39.0 10-11 37.71493717409453 39.0 37.5 39.0 35.0 39.0 12-13 37.163275313146336 39.0 37.0 39.0 33.5 39.0 14-15 38.388884936262414 40.0 37.0 41.0 33.5 41.0 16-17 38.51572319061571 40.0 37.0 41.0 34.0 41.0 18-19 38.377810093975185 40.0 37.0 41.0 34.0 41.0 20-21 38.23190472700361 40.0 36.0 41.0 34.0 41.0 22-23 38.046600751157925 40.0 35.5 41.0 34.0 41.0 24-25 38.03811170122434 40.0 35.0 41.0 34.0 41.0 26-27 38.02434970852856 40.0 35.0 41.0 34.0 41.0 28-29 37.94394220266963 40.0 36.0 41.0 34.0 41.0 30-31 37.81468637100623 40.0 35.5 41.0 33.5 41.0 32-33 37.54900635141392 40.0 35.0 41.0 33.0 41.0 34-35 37.30858701151048 40.0 35.0 41.0 33.0 41.0 36-37 37.12815626659135 40.0 35.0 41.0 32.0 41.0 38-39 37.03541132242766 40.0 35.0 41.0 32.0 41.0 40-41 36.932423136808346 40.0 35.0 41.0 31.0 41.0 42-43 36.881924122680786 40.0 35.0 41.0 31.0 41.0 44-45 36.74297367014478 39.5 35.0 41.0 31.0 41.0 46-47 36.62619042085938 39.0 35.0 41.0 31.0 41.0 48-49 36.52585595715432 39.0 35.0 41.0 31.0 41.0 50-51 36.3107553945903 39.0 35.0 40.5 30.5 41.0 52-53 36.13176386254632 38.5 35.0 40.0 30.0 41.0 54-55 35.95032132469794 38.0 35.0 40.0 30.0 41.0 56-57 35.65600327491987 37.5 35.0 40.0 29.5 41.0 58-59 35.405179271473344 37.0 35.0 40.0 29.0 41.0 60-61 35.05234294417441 36.5 34.0 40.0 28.0 41.0 62-63 34.70588520261779 36.0 34.0 39.0 27.5 41.0 64-65 34.38262719363321 35.5 34.0 39.0 27.0 40.0 66-67 34.082016363873635 35.0 34.0 38.5 26.5 40.0 68-69 33.642647071967794 35.0 33.5 37.5 26.0 40.0 70-71 33.36801876285969 35.0 33.0 37.0 26.0 39.5 72-73 33.102598126931746 35.0 33.0 37.0 26.0 39.0 74-75 32.818032795676814 35.0 33.0 36.0 25.0 39.0 76-77 30.842654043685858 33.5 30.0 34.5 21.5 36.0 78-79 31.927727416549427 34.5 32.0 35.0 24.0 37.0 80-81 32.061656801983546 35.0 33.0 35.0 24.0 37.0 82-83 31.867004109738417 35.0 32.5 35.0 24.0 36.0 84-85 31.653611439338007 34.5 32.0 35.0 23.0 36.0 86 31.228724908518547 34.0 31.0 35.0 20.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 10.0 10 13.0 11 20.0 12 36.0 13 87.0 14 328.0 15 937.0 16 2377.0 17 5268.0 18 10616.0 19 16693.0 20 20392.0 21 20952.0 22 18823.0 23 16704.0 24 16846.0 25 18741.0 26 22013.0 27 26086.0 28 32057.0 29 39475.0 30 49841.0 31 63285.0 32 79217.0 33 106095.0 34 248582.0 35 238428.0 36 247474.0 37 468845.0 38 700947.0 39 325188.0 40 635.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.20958772119563 23.56183288255515 30.598834829273354 13.629744566975866 2 29.831159289456792 25.47948437888249 31.350207274540892 13.339149057119823 3 29.01568279040334 24.87791449098414 32.93464639982267 13.171756318789853 4 27.05519991848453 26.928135887723165 32.27254769817108 13.744116495621226 5 23.640345153672754 32.59417629151077 29.59240476007458 14.173073794741894 6 22.114968993730816 41.08923262835559 26.137221287694203 10.658577090219394 7 89.61696665909908 3.1310522110178174 5.703187147727131 1.548793982155977 8 90.56790900299069 2.5742443283285934 5.418240517122718 1.4396061515580003 9 85.9413338863038 5.584524931042558 6.396640704465296 2.0775004781883544 10-11 35.38595609962764 31.950668838029113 20.707986907471003 11.955388154872248 12-13 28.01000352161143 24.51354390305379 29.378337263118006 18.098115312216773 14-15 17.826897603337844 30.639789203847673 33.73993346478299 17.793379728031493 16-17 23.531193075475105 27.370232193963922 30.51299331608876 18.585581414472212 18-19 24.192844872122603 28.222515789153796 29.567020555842564 18.017618782881037 20-21 26.963870411849776 27.2000328922083 29.291923711528185 16.54417298441374 22-23 22.574637604732185 24.15827230100661 32.38983344744308 20.877256646818125 24-25 20.68414005645304 28.11186211014242 32.12040335858048 19.083594474824054 26-27 19.597338591319673 32.12072513018342 29.4252622885469 18.85667398995 28-29 18.876498695931197 28.289462158765684 33.84229258691855 18.991746558384566 30-31 22.564644808840853 27.14946112194607 30.792130181640072 19.493763887573003 32-33 23.654324342200525 28.182526729388297 28.9944637408094 19.168685187601785 34-35 20.978900720947152 28.052745516202094 30.375078431828218 20.593275331022536 36-37 22.16337774377327 28.486153989163448 29.638954385300043 19.71151388176324 38-39 20.616156867231673 29.925331111917526 28.289354901564707 21.169157119286098 40-41 20.906376976884285 27.64323752285919 29.460961060273185 21.989424439983342 42-43 21.518440194278543 27.415888009181216 28.462503776347287 22.603168020192957 44-45 20.85782521724052 29.200790843095227 28.88579432001616 21.05558961964809 46-47 21.220175794552407 28.616811136157654 28.69001417582673 21.47299889346321 48-49 21.047044795969992 26.987377615064634 30.847653659347557 21.117923929617824 50-51 19.758778554995235 29.157476810099336 30.206881264490892 20.87686337041453 52-53 21.826911904297972 26.880674576289366 29.66659099075264 21.62582252866002 54-55 21.561646970073454 26.81401422588009 30.43378387316478 21.19055493088167 56-57 21.723927115156695 26.78879090744955 29.869879139010695 21.61740283838306 58-59 22.70484784672231 27.319142013896958 29.18856352218347 20.78744661719726 60-61 23.23684356358475 28.697808199097967 27.532458710446672 20.53288952687061 62-63 22.71709304383423 26.39142085401759 30.024758537226294 20.866727564921888 64-65 21.147955945892317 28.923924254964668 29.672168365203618 20.255951433939394 66-67 20.6888951256965 28.7098031294076 27.324272483343847 23.277029261552048 68-69 19.638382346894815 30.538752920524203 27.223200447620048 22.599664284960934 70-71 20.3535554868315 29.257583531014316 29.01729164841805 21.371569333736144 72-73 22.168776356222615 28.830163585107695 28.24983062300345 20.75122943566624 74-75 20.729062947463635 29.876421828270495 27.31708625087817 22.0774289733877 76-77 22.889473242009785 27.917601442966877 27.765242588974314 21.427682726049017 78-79 20.088862591012205 28.659088349544064 29.175406638863215 22.076642420580512 80-81 18.97279778621137 28.148722834879326 29.645693712761638 23.232785666147663 82-83 20.254074432922238 27.87528847718014 29.984108058054748 21.886529031842876 84-85 19.03731299260104 27.456913888556194 29.048360484302016 24.457412634540752 86 19.55406031072411 27.86660064390073 30.088433562208284 22.490905483166877 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 938.0 1 1125.5 2 4503.5 3 5095.5 4 2789.0 5 3338.5 6 3903.0 7 4210.0 8 4344.0 9 4618.5 10 4781.0 11 4728.0 12 4789.0 13 4987.5 14 5050.0 15 5126.5 16 5191.5 17 5447.0 18 5780.5 19 5920.0 20 6278.5 21 6564.0 22 7640.5 23 10107.5 24 12726.0 25 16348.5 26 21443.0 27 25085.0 28 29524.5 29 33022.0 30 36991.5 31 44725.5 32 53129.5 33 58730.5 34 65154.5 35 73587.0 36 76557.0 37 80668.0 38 89440.5 39 98167.5 40 107117.5 41 118595.5 42 128942.5 43 132696.0 44 136584.5 45 141301.0 46 147314.5 47 154153.0 48 148524.5 49 133593.0 50 125943.0 51 117722.5 52 105066.0 53 94395.0 54 83931.0 55 76672.5 56 68311.5 57 62980.0 58 58786.0 59 46199.0 60 32728.0 61 24736.5 62 19555.5 63 14592.0 64 11896.0 65 9907.0 66 6753.0 67 4940.5 68 3561.5 69 2321.0 70 1527.0 71 1242.0 72 933.0 73 582.5 74 358.5 75 204.0 76 160.0 77 78.0 78 49.0 79 30.0 80 31.5 81 25.0 82 19.0 83 18.0 84 11.5 85 9.0 86 10.0 87 8.0 88 4.0 89 2.0 90 2.0 91 1.0 92 1.0 93 2.0 94 1.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2797015.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.802733982585714 #Duplication Level Percentage of deduplicated Percentage of total 1 79.83657180485983 13.414726781186626 2 7.692542461776103 2.5851148926993774 3 2.349073301169288 1.18412561355426 4 1.1387526699794501 0.7653663274249569 5 0.717979125661908 0.603200612677326 6 0.48103454150789604 0.4849617262435358 7 0.3920038496620068 0.4610715484214155 8 0.30685602620430974 0.41248161434114944 9 0.2547944994607935 0.38531197751992124 >10 3.4808493802294995 14.68397373829952 >50 1.672211036074224 20.48800348304956 >100 1.6726070317427035 43.40856938873483 >500 0.0034358339432937397 0.3845993954070166 >1k 0.0010736981072792938 0.2512037705998358 >5k 0.0 0.0 >10k+ 2.1473962145585873E-4 0.4872891298406754 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13505 0.48283616641312255 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.5752400326776936E-5 0.0 0.0 0.01973532498038087 0.0 2 3.5752400326776936E-5 0.0 0.0 0.06835858942479751 0.0 3 3.5752400326776936E-5 0.0 0.0 0.10300266534144437 0.0 4 3.5752400326776936E-5 0.0 0.0 0.1722550647744113 0.0 5 3.5752400326776936E-5 0.0 0.0 0.3337129046501359 0.0 6 3.5752400326776936E-5 0.0 0.0 0.47489913354057806 0.0 7 3.5752400326776936E-5 0.0 0.0 0.5716451288248364 0.0 8 3.5752400326776936E-5 0.0 0.0 0.7656019005976014 0.0 9 3.5752400326776936E-5 0.0 0.0 0.8293841827805715 0.0 10 3.5752400326776936E-5 0.0 0.0 0.9541600599210229 0.0 11 3.5752400326776936E-5 0.0 0.0 1.1510485285205836 0.0 12 7.150480065355387E-5 0.0 0.0 1.325055460911007 0.0 13 7.150480065355387E-5 0.0 0.0 1.3839039118488818 0.0 14 7.150480065355387E-5 0.0 0.0 1.4062134096527905 0.0 15 7.150480065355387E-5 0.0 0.0 1.4413580191740123 0.0 16 7.150480065355387E-5 0.0 0.0 1.5199060426919413 0.0 17 7.150480065355387E-5 0.0 0.0 1.6290223684892644 0.0 18 7.150480065355387E-5 0.0 0.0 1.7593756200806931 0.0 19 7.150480065355387E-5 0.0 0.0 1.8507230029156083 0.0 20 7.150480065355387E-5 0.0 0.0 1.954011687459667 0.0 21 7.150480065355387E-5 0.0 0.0 2.0806466894171107 0.0 22 7.150480065355387E-5 0.0 0.0 2.2345250204235585 0.0 23 7.150480065355387E-5 0.0 0.0 2.3788574605427573 0.0 24 7.150480065355387E-5 0.0 0.0 2.4844342987077295 0.0 25 7.150480065355387E-5 0.0 0.0 2.581144541591661 0.0 26 7.150480065355387E-5 0.0 0.0 2.6724561720262496 0.0 27 7.150480065355387E-5 0.0 0.0 2.775923618571942 0.0 28 7.150480065355387E-5 0.0 0.0 2.8862555259803755 0.0 29 7.150480065355387E-5 0.0 0.0 3.0229369524296437 0.0 30 7.150480065355387E-5 0.0 0.0 3.178888922655045 0.0 31 1.0725720098033081E-4 0.0 0.0 3.3130676810814386 0.0 32 1.0725720098033081E-4 0.0 0.0 3.4419550842594693 0.0 33 1.4300960130710774E-4 0.0 0.0 3.5708067350371735 0.0 34 1.4300960130710774E-4 0.0 0.0 3.713208545538726 0.0 35 1.4300960130710774E-4 0.0 0.0 3.865942799734717 0.0 36 1.4300960130710774E-4 0.0 0.0 4.005877694613722 0.0 37 1.7876200163388469E-4 0.0 0.0 4.158325929607099 0.0 38 1.7876200163388469E-4 0.0 0.0 4.3373381980432715 0.0 39 1.7876200163388469E-4 0.0 0.0 4.604730400087236 0.0 40 1.7876200163388469E-4 0.0 0.0 4.777092722062627 0.0 41 1.7876200163388469E-4 0.0 0.0 4.948275214827236 0.0 42 1.7876200163388469E-4 0.0 0.0 5.117741592376158 0.0 43 1.7876200163388469E-4 0.0 0.0 5.280629528264954 0.0 44 2.502668022874386E-4 0.0 0.0 5.449130591005054 0.0 45 2.502668022874386E-4 0.0 0.0 5.611339231287641 0.0 46 2.502668022874386E-4 0.0 0.0 5.79936110460616 0.0 47 2.860192026142155E-4 0.0 0.0 5.993067609576638 0.0 48 2.860192026142155E-4 0.0 0.0 6.176370166052023 0.0 49 2.860192026142155E-4 0.0 0.0 6.362068133349303 0.0 50 2.860192026142155E-4 0.0 0.0 6.5571689819325245 0.0 51 3.2177160294099243E-4 0.0 0.0 6.750732477301695 0.0 52 3.2177160294099243E-4 0.0 0.0 6.977438447773787 0.0 53 3.2177160294099243E-4 0.0 0.0 7.176936841597203 0.0 54 3.2177160294099243E-4 0.0 0.0 7.38151207626702 0.0 55 3.5752400326776937E-4 0.0 0.0 7.587124130546314 0.0 56 3.5752400326776937E-4 0.0 0.0 7.801424018105015 0.0 57 3.5752400326776937E-4 0.0 0.0 8.007679615590192 0.0 58 3.5752400326776937E-4 0.0 0.0 8.213935213075368 0.0 59 3.5752400326776937E-4 0.0 0.0 8.424087822196162 0.0 60 3.5752400326776937E-4 0.0 0.0 8.652938936687862 0.0 61 3.5752400326776937E-4 0.0 0.0 8.891621961269426 0.0 62 3.5752400326776937E-4 0.0 0.0 9.15247147405359 0.0 63 3.5752400326776937E-4 0.0 0.0 9.411783633623703 0.0 64 3.5752400326776937E-4 0.0 0.0 9.66394531312846 0.0 65 3.5752400326776937E-4 0.0 0.0 9.902735594911004 0.0 66 3.5752400326776937E-4 0.0 0.0 10.135090444634727 0.0 67 3.5752400326776937E-4 0.0 0.0 10.37631188963949 0.0 68 3.5752400326776937E-4 0.0 0.0 10.638269726833785 0.0 69 3.5752400326776937E-4 0.0 0.0 10.992254242469203 0.0 70 3.5752400326776937E-4 0.0 0.0 11.244344417173307 0.0 71 3.5752400326776937E-4 0.0 0.0 11.504729148753224 0.0 72 3.5752400326776937E-4 0.0 0.0 11.7537088646289 0.0 73 3.932764035945463E-4 0.0 0.0 12.011304908983327 0.0 74 3.932764035945463E-4 0.0 0.0 12.276873738610625 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 8490 0.0 69.87044 1 CGAAACG 330 0.0 69.09091 80 GTACGGG 1025 0.0 68.29269 3 CGGGATC 900 0.0 66.22222 6 ACGGGAT 1900 0.0 65.68421 5 TACGGGA 1640 0.0 65.365845 4 TAAGGGA 4820 0.0 65.145226 4 TAGGGAC 3760 0.0 64.78724 5 CGGGATA 890 0.0 63.82023 6 TAGGGAT 6180 0.0 63.43042 5 AAGGGAT 5995 0.0 63.25271 5 GCGGGAT 2245 0.0 63.251667 5 AGGGATT 7285 0.0 62.70419 6 ATAGGGA 4670 0.0 62.098507 4 CGAGGGA 2385 0.0 62.05451 4 CGTTAGG 765 0.0 61.69935 2 GCGGGGT 1590 0.0 61.635223 5 CCGATCC 1925 0.0 61.090908 80 CGGGATT 1675 0.0 60.895523 6 GTAGGGA 5505 0.0 60.890095 4 >>END_MODULE