##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547821_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3602151 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.19628993898368 33.0 31.0 34.0 31.0 34.0 2 32.647983663094635 34.0 31.0 34.0 31.0 34.0 3 32.75780582213239 34.0 31.0 34.0 31.0 34.0 4 36.27672771074838 37.0 37.0 37.0 35.0 37.0 5 36.25614362085321 37.0 37.0 37.0 35.0 37.0 6 36.31043340492944 37.0 37.0 37.0 35.0 37.0 7 36.4456317905607 37.0 37.0 37.0 35.0 37.0 8 36.44397361465413 37.0 37.0 37.0 35.0 37.0 9 38.246936622035 39.0 39.0 39.0 37.0 39.0 10-11 37.93192845052859 39.0 38.0 39.0 35.0 39.0 12-13 37.51646252475257 39.0 37.0 39.0 35.0 39.0 14-15 38.82110772146976 40.0 38.0 41.0 35.0 41.0 16-17 38.92862500766903 40.5 38.0 41.0 35.0 41.0 18-19 38.73344648794567 40.0 37.5 41.0 35.0 41.0 20-21 38.540205699316886 40.0 37.0 41.0 35.0 41.0 22-23 38.37034011067276 40.0 36.0 41.0 34.5 41.0 24-25 38.3502329580298 40.0 36.0 41.0 35.0 41.0 26-27 38.35916650912191 40.0 36.0 41.0 35.0 41.0 28-29 38.254863829972706 40.0 36.0 41.0 34.5 41.0 30-31 38.06717930480982 40.0 36.0 41.0 34.0 41.0 32-33 37.698108713377096 40.0 36.0 41.0 33.5 41.0 34-35 37.32802122953757 40.0 35.5 41.0 33.0 41.0 36-37 37.142055677288376 40.0 35.0 41.0 32.5 41.0 38-39 37.03857736669006 40.0 35.0 41.0 32.0 41.0 40-41 36.91894023876289 40.0 35.0 41.0 32.0 41.0 42-43 36.86716964391554 40.0 35.0 41.0 32.0 41.0 44-45 36.72731320813591 40.0 35.0 41.0 31.0 41.0 46-47 36.61038834851732 40.0 35.0 41.0 31.0 41.0 48-49 36.49825382111966 39.0 35.0 41.0 31.0 41.0 50-51 36.284956960438365 39.0 35.0 41.0 30.5 41.0 52-53 36.08658881873636 39.0 35.0 40.5 30.0 41.0 54-55 35.89757453255014 38.0 35.0 40.0 30.0 41.0 56-57 35.629851580347406 38.0 35.0 40.0 29.0 41.0 58-59 35.399678691981535 37.5 35.0 40.0 29.0 41.0 60-61 35.063544532142046 37.0 35.0 40.0 28.0 41.0 62-63 34.72185716256759 36.0 34.0 39.5 27.0 41.0 64-65 34.390911569226276 36.0 34.0 39.0 26.5 40.5 66-67 34.07274348021502 35.5 34.0 39.0 26.0 40.0 68-69 33.607663032449224 35.0 34.0 38.0 25.5 40.0 70-71 33.31770850250309 35.0 34.0 37.0 25.0 39.5 72-73 33.02322501194425 35.0 33.5 37.0 25.0 39.0 74-75 32.70533453483766 35.0 33.0 36.5 24.0 39.0 76-77 30.77541252435003 33.5 30.0 34.5 20.5 36.5 78-79 31.85496776786981 34.5 32.5 35.0 22.5 37.0 80-81 31.94351569381739 35.0 33.0 35.0 23.0 37.0 82-83 31.75237601088905 35.0 33.0 35.0 20.5 36.5 84-85 31.522995426899094 35.0 32.5 35.0 20.0 36.0 86 31.09054756449688 34.0 32.0 35.0 19.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 3.0 9 11.0 10 21.0 11 16.0 12 67.0 13 103.0 14 345.0 15 1008.0 16 2857.0 17 7470.0 18 18124.0 19 30938.0 20 37154.0 21 36711.0 22 30521.0 23 24291.0 24 20483.0 25 19746.0 26 21923.0 27 25611.0 28 31629.0 29 39814.0 30 51784.0 31 65675.0 32 85128.0 33 116622.0 34 287968.0 35 288409.0 36 318486.0 37 614239.0 38 965752.0 39 458266.0 40 975.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.69184190224119 22.888046614370136 29.555451728703215 15.864659754685464 2 32.113062445189 24.733249661105265 30.596496371195986 12.557191522509745 3 28.33895636246232 25.27706362115303 33.640871801320934 12.743108215063723 4 26.352143483157704 27.020355337685732 32.69041192332026 13.937089255836305 5 24.134274215600623 30.702405312825586 30.98121094868039 14.182109522893406 6 21.994885833492265 39.743170122518464 27.36961887494444 10.89232516904483 7 87.04140942453552 3.209526752209999 7.954164053644614 1.7948997696098805 8 87.68791202811876 2.871090079233214 7.827156607260495 1.6138412853875364 9 83.18371439731426 5.566951524242043 8.774007530500526 2.4753265479431596 10-11 32.9533659194187 30.7579970967347 23.554329066160747 12.73430791768585 12-13 26.789923576218765 23.67518740885654 31.377987763422468 18.156901251502227 14-15 18.09631245330915 29.612070676659584 34.28366828597691 18.00794858405436 16-17 23.8057205264299 27.748573005407046 30.87737021574054 17.56833625242251 18-19 23.600801299001624 28.33316815425006 30.59109681965026 17.47493372709806 20-21 26.09365903872436 27.43371946373153 30.92925588072238 15.543365616821728 22-23 22.533175316637198 23.576801749843355 33.863655354814384 20.026367578705056 24-25 20.32688246550464 27.952562232954698 33.14311365625705 18.57744164528361 26-27 19.374090647504783 31.193348085629946 30.945065878693036 18.487495388172235 28-29 18.50703926626063 28.160035489905894 34.412952149979276 18.9199730938542 30-31 21.584006333993216 27.574982281420183 32.089257224364 18.7517541602226 32-33 22.95035660637214 27.69861674316263 30.44818221112885 18.902844439336384 34-35 20.758749424996342 27.885852092263764 31.530854758726107 19.82454372401379 36-37 22.091244925601398 28.94298434463186 30.046283456745705 18.919487273021037 38-39 20.9327149250545 29.094088504340874 29.82713661920336 20.14605995140126 40-41 20.84501732437091 27.716231218513602 30.294648947254014 21.14410250986147 42-43 21.008530736218443 27.795517178485856 29.8833669104932 21.3125851748025 44-45 20.822447476521667 29.269816839993663 29.500165317889227 20.407570365595447 46-47 20.871445977694993 28.816254510152405 30.113298970531776 20.199000541620826 48-49 21.190907876987943 27.75547166123797 31.01051288521775 20.04310757655634 50-51 20.101392195940704 29.0958929817212 30.255200295601153 20.54751452673694 52-53 21.341887111339865 26.958822659016796 30.872040067170975 20.827250162472367 54-55 21.109650872492576 27.249593367962643 30.81733664135679 20.823419118187996 56-57 21.152541911763276 27.49300348597269 30.4028065453114 20.95164805695264 58-59 22.31407012088055 27.9522290986691 29.455289353500174 20.278411426950175 60-61 22.368301606456807 28.856119579662266 28.967303147480493 19.808275666400437 62-63 21.595624392203437 27.65854346472427 30.419407737210353 20.326424405861943 64-65 21.19097727996411 29.44975099600211 29.74837812184997 19.610893602183808 66-67 20.526874081625117 29.64227485188711 27.949147606527326 21.881703459960452 68-69 19.809205666281063 30.310597751177003 28.51761350370931 21.36258307883262 70-71 20.428155288326337 29.51490651002693 29.402543091613868 20.654395110032866 72-73 21.830775556049705 29.469364277066674 28.736121833870932 19.963738333012692 74-75 20.635947798967894 30.26055820536119 27.90438268690013 21.19911130877079 76-77 22.31058609147701 28.96945463974164 28.34616039138837 20.37379887739298 78-79 19.720328215002645 29.450000846716307 29.33816489092212 21.491506047358925 80-81 19.214324996370223 29.17209744955167 29.71406529043341 21.899512263644695 82-83 20.282186948853614 28.88177091965328 29.59857873809288 21.237463393400223 84-85 19.376103333813603 28.774487799095596 29.22792520357975 22.621483663511054 86 19.33647423442271 28.663956619253327 30.044687188293885 21.954881958030075 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1393.0 1 1655.5 2 9457.0 3 11018.5 4 5566.0 5 6736.0 6 7874.0 7 8367.0 8 8615.0 9 8939.0 10 9257.5 11 9611.5 12 9848.0 13 10012.5 14 10052.0 15 10212.0 16 10268.0 17 10487.5 18 10965.5 19 11519.0 20 12667.0 21 13416.0 22 14841.0 23 16335.0 24 18657.5 25 22199.5 26 27575.0 27 34391.0 28 43744.0 29 50368.0 30 55221.5 31 63894.5 32 74361.0 33 85882.5 34 92872.5 35 100243.5 36 105499.0 37 110402.5 38 121746.5 39 132141.0 40 141654.0 41 150636.5 42 158707.5 43 163355.0 44 163634.5 45 165932.5 46 172713.5 47 176750.5 48 176068.0 49 166010.5 50 155910.0 51 143807.0 52 126332.0 53 116088.0 54 105070.0 55 93229.0 56 80949.5 57 74365.0 58 67980.0 59 54272.5 60 41070.5 61 32929.0 62 26814.5 63 19175.5 64 15389.0 65 13379.5 66 9167.5 67 5953.5 68 4456.0 69 3264.0 70 2078.5 71 1599.0 72 1437.5 73 1103.0 74 663.0 75 275.5 76 131.5 77 143.0 78 137.0 79 96.0 80 73.0 81 47.5 82 32.5 83 19.0 84 14.5 85 9.5 86 8.0 87 8.0 88 7.5 89 5.5 90 2.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3602151.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.498672888494838 #Duplication Level Percentage of deduplicated Percentage of total 1 79.9954535998751 13.198188215111061 2 7.28483132585172 2.403800981861754 3 2.267481297303354 1.1223129661496385 4 1.197179918100149 0.790075194296376 5 0.7113880292174389 0.5868479195424767 6 0.5610137644477496 0.555358955133991 7 0.41289906627156775 0.47686006412656845 8 0.3063484691325432 0.4043474545687192 9 0.2614847858428348 0.38827367522451517 >10 3.6126567871484627 14.766728253178425 >50 1.6612983163207449 20.049397454359884 >100 1.7208081590991926 43.40393091004085 >500 0.005452557249044599 0.5855268796120635 >1k 0.0015335317262937939 0.36009284621427506 >5k 0.0 0.0 >10k+ 1.7039241403264373E-4 0.9082582305793426 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 32308 0.896908541590844 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7761190466474058E-5 0.0 0.0 0.023069549277639944 0.0 2 2.7761190466474058E-5 0.0 0.0 0.08517133235114241 0.0 3 2.7761190466474058E-5 0.0 0.0 0.13283729638207836 0.0 4 2.7761190466474058E-5 0.0 0.0 0.19274594540872939 0.0 5 2.7761190466474058E-5 0.0 0.0 0.3505127908297015 0.0 6 2.7761190466474058E-5 0.0 0.0 0.4934829217320429 0.0 7 2.7761190466474058E-5 0.0 0.0 0.5846229100334772 0.0 8 2.7761190466474058E-5 0.0 0.0 0.728203787126081 0.0 9 2.7761190466474058E-5 0.0 0.0 0.7974679573399338 0.0 10 2.7761190466474058E-5 0.0 0.0 0.9304440596743446 0.0 11 2.7761190466474058E-5 0.0 0.0 1.126354780796252 0.0 12 2.776119046647406E-4 0.0 0.0 1.2833720740746293 0.0 13 2.776119046647406E-4 0.0 0.0 1.3452517676244 0.0 14 2.776119046647406E-4 0.0 0.0 1.3807860914214867 0.0 15 2.776119046647406E-4 0.0 0.0 1.4284242942619563 0.0 16 2.776119046647406E-4 0.0 0.0 1.5117911492327778 0.0 17 2.776119046647406E-4 0.0 0.0 1.6205039710994902 0.0 18 2.776119046647406E-4 0.0 0.0 1.7426254479615098 0.0 19 2.776119046647406E-4 0.0 0.0 1.8301009591213695 0.0 20 2.776119046647406E-4 0.0 0.0 1.9257382602783726 0.0 21 2.776119046647406E-4 0.0 0.0 2.0379489921438605 0.0 22 2.776119046647406E-4 0.0 0.0 2.1616806180529355 0.0 23 2.776119046647406E-4 0.0 0.0 2.285440005152477 0.0 24 2.776119046647406E-4 0.0 0.0 2.379494918452891 0.0 25 2.776119046647406E-4 0.0 0.0 2.464749534375433 0.0 26 2.776119046647406E-4 0.0 0.0 2.5492823593458462 0.0 27 2.776119046647406E-4 0.0 0.0 2.638978765743024 0.0 28 2.776119046647406E-4 0.0 0.0 2.7324229328531757 0.0 29 2.776119046647406E-4 0.0 0.0 2.845466500432658 0.0 30 2.776119046647406E-4 0.0 0.0 2.9655336492001583 0.0 31 3.0537309513121465E-4 0.0 0.0 3.071081695353693 0.0 32 3.0537309513121465E-4 0.0 0.0 3.1710219810329994 0.0 33 3.0537309513121465E-4 0.0 0.0 3.2717395800453675 0.0 34 3.0537309513121465E-4 0.0 0.0 3.3825900135779983 0.0 35 3.0537309513121465E-4 0.0 0.0 3.5024350728217666 0.0 36 3.0537309513121465E-4 0.0 0.0 3.61342431230673 0.0 37 3.0537309513121465E-4 0.0 0.0 3.7303822077419855 0.0 38 3.0537309513121465E-4 0.0 0.0 3.8641356234094575 0.0 39 3.0537309513121465E-4 0.0 0.0 4.063821866434806 0.0 40 3.0537309513121465E-4 0.0 0.0 4.208513191146068 0.0 41 3.0537309513121465E-4 0.0 0.0 4.348151979192433 0.0 42 3.0537309513121465E-4 0.0 0.0 4.489289871523987 0.0 43 3.0537309513121465E-4 0.0 0.0 4.6168803029079015 0.0 44 3.0537309513121465E-4 0.0 0.0 4.740500884055111 0.0 45 3.0537309513121465E-4 0.0 0.0 4.865870420201707 0.0 46 3.0537309513121465E-4 0.0 0.0 5.008146521342387 0.0 47 3.0537309513121465E-4 0.0 0.0 5.150644712006798 0.0 48 3.0537309513121465E-4 0.0 0.0 5.286230366245057 0.0 49 3.0537309513121465E-4 0.0 0.0 5.428534228576203 0.0 50 3.0537309513121465E-4 0.0 0.0 5.573031224954201 0.0 51 3.0537309513121465E-4 0.0 0.0 5.723358071330158 0.0 52 3.0537309513121465E-4 0.0 0.0 5.900030287458799 0.0 53 3.0537309513121465E-4 0.0 0.0 6.051995044072278 0.0 54 3.0537309513121465E-4 0.0 0.0 6.214120396396487 0.0 55 3.0537309513121465E-4 0.0 0.0 6.370277092770403 0.0 56 3.0537309513121465E-4 0.0 0.0 6.528210505334174 0.0 57 3.3313428559768874E-4 0.0 0.0 6.687643022183135 0.0 58 3.608954760641628E-4 0.0 0.0 6.845743001889704 0.0 59 3.608954760641628E-4 0.0 0.0 7.014725368259132 0.0 60 3.886566665306368E-4 0.0 0.0 7.186789226770338 0.0 61 4.164178569971109E-4 0.0 0.0 7.366876069326355 0.0 62 4.164178569971109E-4 0.0 0.0 7.586411563535232 0.0 63 4.164178569971109E-4 0.0 0.0 7.784293329180259 0.0 64 4.164178569971109E-4 0.0 0.0 7.978149722207648 0.0 65 4.164178569971109E-4 0.0 0.0 8.153017460955967 0.0 66 4.164178569971109E-4 0.0 0.0 8.330161617322538 0.0 67 4.164178569971109E-4 0.0 0.0 8.524101293921326 0.0 68 4.4417904746358493E-4 0.0 0.0 8.730255894325364 0.0 69 4.4417904746358493E-4 0.0 0.0 9.001732575897012 0.0 70 4.4417904746358493E-4 0.0 0.0 9.20158538606516 0.0 71 4.4417904746358493E-4 0.0 0.0 9.390722376713247 0.0 72 4.4417904746358493E-4 0.0 0.0 9.590103246643464 0.0 73 4.4417904746358493E-4 0.0 0.0 9.780767102767207 0.0 74 4.71940237930059E-4 0.0 0.0 10.003606178641595 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 17925 0.0 73.126915 1 TATTGCG 365 0.0 67.945206 1 CGAGGGA 2875 0.0 64.695656 4 CGAACGG 180 0.0 64.44444 2 TACGGGA 2070 0.0 64.347824 4 TAGGGAC 4230 0.0 63.92435 5 GCGGGAT 2820 0.0 62.695034 5 TGCGGGA 3300 0.0 62.545456 4 GCGAGGG 2850 0.0 62.31579 3 TAGGGAT 7325 0.0 62.307167 5 TAACGGG 1265 0.0 62.292492 3 AGGGATC 5040 0.0 62.22222 6 ATAGGGA 6345 0.0 61.71789 4 AGGGATT 8825 0.0 61.371105 6 AAGGGAT 7445 0.0 61.356617 5 GTAGGGA 6255 0.0 61.32694 4 ACGGGAC 1610 0.0 60.869564 5 GCGGGAC 1955 0.0 60.562656 5 TAAGGGA 6085 0.0 60.54232 4 CCGATCC 2090 0.0 60.47847 80 >>END_MODULE