##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547818_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1815645 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.06627892567104 33.0 31.0 34.0 31.0 34.0 2 32.49011618460657 34.0 31.0 34.0 31.0 34.0 3 32.61344480886957 34.0 31.0 34.0 31.0 34.0 4 36.12323444285639 37.0 35.0 37.0 35.0 37.0 5 36.09144573966827 37.0 35.0 37.0 35.0 37.0 6 36.13892418396768 37.0 36.0 37.0 35.0 37.0 7 36.346224069132454 37.0 37.0 37.0 35.0 37.0 8 36.3523001467798 37.0 37.0 37.0 35.0 37.0 9 38.16824819829868 39.0 39.0 39.0 37.0 39.0 10-11 37.72963795235302 39.0 37.5 39.0 35.0 39.0 12-13 36.768475941056764 39.0 35.0 39.0 33.5 39.0 14-15 37.828175937476765 40.0 35.0 41.0 33.0 41.0 16-17 38.05689245419671 40.0 35.0 41.0 34.0 41.0 18-19 37.94822611248344 40.0 36.0 41.0 34.0 41.0 20-21 37.758820419189874 40.0 35.0 41.0 34.0 41.0 22-23 37.5658190340072 39.5 35.0 41.0 33.5 41.0 24-25 37.53189307381123 39.0 35.0 41.0 34.0 41.0 26-27 37.52312621685407 39.0 35.0 41.0 34.0 41.0 28-29 37.49266541642227 39.0 35.0 41.0 34.0 41.0 30-31 37.35665562375905 39.0 35.0 41.0 33.5 41.0 32-33 37.0442592026525 39.0 35.0 41.0 33.0 41.0 34-35 36.77137766468665 39.0 35.0 41.0 32.0 41.0 36-37 36.58079250073665 39.0 35.0 41.0 31.5 41.0 38-39 36.50667834295801 39.0 35.0 41.0 31.0 41.0 40-41 36.3861831470359 39.0 35.0 41.0 31.0 41.0 42-43 36.3349107342019 38.5 35.0 41.0 31.0 41.0 44-45 36.196877693602 38.0 35.0 41.0 31.0 41.0 46-47 36.079644974650876 38.0 35.0 41.0 31.0 41.0 48-49 36.00801175339893 38.0 35.0 40.0 31.0 41.0 50-51 35.77247947699027 37.5 35.0 40.0 30.0 41.0 52-53 35.57784836793536 37.0 35.0 40.0 30.0 41.0 54-55 35.40073389897255 37.0 35.0 40.0 29.5 41.0 56-57 35.10689451957845 36.0 34.5 40.0 28.5 41.0 58-59 34.87283444726255 36.0 34.0 40.0 28.0 41.0 60-61 34.55740549501692 35.0 34.0 39.0 27.5 41.0 62-63 34.14113717163873 35.0 33.5 39.0 26.5 40.0 64-65 33.862339003494625 35.0 33.5 38.5 26.0 40.0 66-67 33.591859366781506 35.0 34.0 37.5 26.0 40.0 68-69 33.231316694618165 35.0 33.5 37.0 25.5 39.5 70-71 32.986969644396346 35.0 33.0 36.5 25.0 39.0 72-73 32.750275246537726 35.0 33.0 36.0 25.0 39.0 74-75 32.4741830038361 35.0 33.0 35.5 24.5 38.0 76-77 30.5231708290993 33.0 30.0 34.5 20.5 36.0 78-79 31.531803849320767 34.0 31.5 35.0 22.5 36.5 80-81 31.8190059180071 35.0 32.5 35.0 23.0 36.0 82-83 31.679499296393292 35.0 32.5 35.0 22.0 36.0 84-85 31.504986382249832 35.0 32.0 35.0 20.0 36.0 86 31.088454516163676 34.0 31.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 8.0 10 3.0 11 9.0 12 16.0 13 68.0 14 196.0 15 589.0 16 1573.0 17 3585.0 18 7191.0 19 11562.0 20 14453.0 21 15363.0 22 13380.0 23 11758.0 24 11817.0 25 13343.0 26 15657.0 27 18524.0 28 22433.0 29 27863.0 30 34847.0 31 43778.0 32 55845.0 33 77848.0 34 227857.0 35 207829.0 36 145900.0 37 272771.0 38 384200.0 39 175043.0 40 334.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.706583610782946 23.6854671480383 30.676536437464375 13.931412803714382 2 30.21758108000187 25.662946225721438 30.749623412065684 13.369849282211005 3 29.008368926745042 24.79229144463813 33.036303903020695 13.163035725596137 4 26.5121210368767 26.860977779246493 32.08264831506159 14.544252868815214 5 24.263058031718757 31.64456708222147 29.46908674327856 14.623288142781215 6 21.850912485645598 40.82648315061589 27.210825904843734 10.111778458894772 7 88.43584511289376 3.621247545638052 6.2872422747838925 1.6556650666842914 8 89.61685792101429 2.6272757064293955 6.034825089706413 1.7210412828498962 9 85.50267260395066 4.932462017630098 7.37440413737267 2.1904612410465703 10-11 43.50151048250071 26.655155605859076 18.62718207579125 11.216151835848969 12-13 30.940712529156304 27.563455411162423 25.966364570166522 15.529467489514746 14-15 15.64066764152684 32.99615288230904 35.627366583225246 15.735812892938872 16-17 20.548620462700583 24.096147650008675 33.79498745624833 21.56024443104241 18-19 24.660217168003655 26.88661605104522 29.629442980318288 18.823723800632834 20-21 27.22159342823074 26.806864778081618 28.155751812716694 17.81578998097095 22-23 22.286184799341278 24.60874785544531 29.739514056988014 23.365553288225396 24-25 19.24858659044031 26.01430896458283 35.32455408408582 19.412550360891036 26-27 17.129257095963144 34.342974535220264 29.52958865857588 18.998179710240713 28-29 16.099843306373216 28.082389453885533 36.85332209765676 18.964445142084493 30-31 22.506079106873866 28.114086178740887 30.10448077680384 19.27535393758141 32-33 26.28671904474718 28.654307422431145 27.301812854385084 17.75716067843659 34-35 19.93305409372427 28.650644812174185 29.655852327960584 21.760448766140957 36-37 22.940965882647767 29.083741590454082 29.255003042995742 18.720289483902413 38-39 19.867099570675986 31.044972998576263 28.038520746070954 21.049406684676793 40-41 20.46303104406423 25.49837660996505 29.25481027403485 24.78378207193587 42-43 21.528079552996317 25.811350787185823 27.89518325443575 24.76538640538211 44-45 19.337783542487657 32.36227346204792 27.27474258459115 21.02520041087327 46-47 21.509766501711514 29.823864246590055 27.479766143712013 21.186603107986418 48-49 21.071464961487514 26.533408237843854 31.699754081882748 20.695372718785887 50-51 18.664909715280245 31.402724651570104 28.60567456744022 21.32669106570943 52-53 22.46394531970732 25.91497787287713 29.82039440529399 21.80068240212156 54-55 22.706063134588533 26.74594978643953 29.899594909797894 20.64839216917404 56-57 23.370014512748913 24.2708789438464 28.7027199700382 23.65638657336649 58-59 23.640662133842245 26.893610810483327 27.986968818243657 21.478758237430775 60-61 25.365283411680146 28.886896942959666 25.973799944372384 19.774019700987804 62-63 23.73275062030298 25.49341969382781 30.254868104723116 20.518961581146094 64-65 20.002808919144435 30.195054650000415 29.96177666889728 19.84035976195787 66-67 18.83790608846994 28.476216440989287 25.448036372749076 27.237841097791694 68-69 17.941282574512087 32.452489335745696 24.33438254724905 25.271845542493164 70-71 19.48277333950194 29.98570755847096 28.214160807867177 22.317358294159927 72-73 23.308163214725344 29.404068526611756 26.194245020364665 21.093523238298236 74-75 22.188065398246902 31.788372727047413 23.96005276361844 22.063509111087246 76-77 26.926519225950006 27.74790776831374 25.160012006752417 20.165560998983832 78-79 18.680276155305688 29.60240024894734 29.885688006190637 21.831635589556328 80-81 16.70488999776939 28.668324479730344 30.48415301449347 24.1426325080068 82-83 18.78494970107042 27.336621421037705 31.258533468822375 22.619895409069503 84-85 16.18438626493615 27.013017412544855 29.381431942918358 27.421164379600636 86 19.068375150428636 26.477477700761987 30.866992170826347 23.58715497798303 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 753.0 1 924.0 2 3168.5 3 3503.5 4 1839.5 5 2118.5 6 2477.5 7 2632.0 8 2752.0 9 2812.0 10 2859.5 11 3021.0 12 3071.0 13 3277.5 14 3488.0 15 3529.5 16 3706.0 17 3844.5 18 3884.0 19 4002.0 20 4269.0 21 4454.0 22 5017.0 23 6063.5 24 8098.0 25 9810.0 26 11298.5 27 13583.5 28 18996.0 29 23451.0 30 24226.0 31 27037.5 32 30026.5 33 32801.0 34 36662.5 35 38858.5 36 39015.0 37 41891.5 38 47002.0 39 54103.5 40 65843.0 41 76470.0 42 88631.0 43 97037.0 44 97486.0 45 102168.5 46 109649.0 47 117174.5 48 114115.5 49 94116.5 50 81455.0 51 73313.5 52 62794.0 53 56750.5 54 52048.0 55 48326.5 56 44519.0 57 43396.0 58 38665.0 59 29806.0 60 21632.0 61 15697.0 62 12220.0 63 9123.5 64 7615.0 65 6709.5 66 4952.5 67 3851.0 68 3040.0 69 2137.0 70 1288.5 71 782.0 72 680.0 73 547.0 74 395.5 75 205.5 76 98.0 77 67.5 78 78.0 79 81.0 80 69.5 81 36.0 82 10.0 83 6.5 84 4.0 85 1.0 86 1.0 87 2.5 88 2.5 89 1.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1815645.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.705246143538862 #Duplication Level Percentage of deduplicated Percentage of total 1 80.47978520395299 12.639548362072187 2 8.66658583091052 2.7222172739711197 3 2.597104617751377 1.2236450184692038 4 1.1796763132511048 0.7410842747724422 5 0.6947907666466054 0.5455930004221504 6 0.4640465318190376 0.4372779002564115 7 0.31251677149198187 0.3435706974185965 8 0.2355301613629878 0.29592473267465197 9 0.19913239559379345 0.2814680959157772 >10 2.1941443399059524 8.035506238555506 >50 1.0210234945671786 11.721206415844192 >100 1.9415023593305936 59.07069213454357 >500 0.01274509207438026 1.203602111674322 >1k 0.001062091006198355 0.2004428148281947 >5k 3.5403033539945167E-4 0.5382209285816713 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9680 0.5331438689831989 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.507684596933872E-5 0.0 0.0 0.0319996475081858 0.0 2 5.507684596933872E-5 0.0 0.0 0.11852537252601693 0.0 3 5.507684596933872E-5 0.0 0.0 0.17442837118489574 0.0 4 5.507684596933872E-5 0.0 0.0 0.2890432876470896 0.0 5 5.507684596933872E-5 0.0 0.0 0.5105623621357699 0.0 6 5.507684596933872E-5 0.0 0.0 0.702615324030854 0.0 7 5.507684596933872E-5 0.0 0.0 0.8173954710309559 0.0 8 5.507684596933872E-5 0.0 0.0 1.050590836865136 0.0 9 5.507684596933872E-5 0.0 0.0 1.1147002855734462 0.0 10 5.507684596933872E-5 0.0 0.0 1.2581203924776043 0.0 11 5.507684596933872E-5 0.0 0.0 1.4944000616860675 0.0 12 5.507684596933872E-5 0.0 0.0 1.693668090403135 0.0 13 5.507684596933872E-5 0.0 0.0 1.7697292146867918 0.0 14 5.507684596933872E-5 0.0 0.0 1.8031608601901803 0.0 15 5.507684596933872E-5 0.0 0.0 1.850251563493965 0.0 16 5.507684596933872E-5 0.0 0.0 1.9490594251629587 0.0 17 5.507684596933872E-5 0.0 0.0 2.075130325586775 0.0 18 5.507684596933872E-5 0.0 0.0 2.241021785646423 0.0 19 5.507684596933872E-5 0.0 0.0 2.3365250365572563 0.0 20 5.507684596933872E-5 0.0 0.0 2.4467888821878727 0.0 21 5.507684596933872E-5 0.0 0.0 2.58778560786938 0.0 22 5.507684596933872E-5 0.0 0.0 2.7293881788565497 0.0 23 5.507684596933872E-5 0.0 0.0 2.8744055142938185 0.0 24 5.507684596933872E-5 0.0 0.0 2.9886899696801965 0.0 25 5.507684596933872E-5 0.0 0.0 3.0850193732805695 0.0 26 5.507684596933872E-5 0.0 0.0 3.188508766856957 0.0 27 5.507684596933872E-5 0.0 0.0 3.3004799947126227 0.0 28 5.507684596933872E-5 0.0 0.0 3.4131121447199204 0.0 29 5.507684596933872E-5 0.0 0.0 3.541991964288173 0.0 30 5.507684596933872E-5 0.0 0.0 3.6947751350071187 0.0 31 5.507684596933872E-5 0.0 0.0 3.8423810822049465 0.0 32 5.507684596933872E-5 0.0 0.0 3.9739045903797274 0.0 33 5.507684596933872E-5 0.0 0.0 4.086371509849117 0.0 34 5.507684596933872E-5 0.0 0.0 4.228304541912103 0.0 35 5.507684596933872E-5 0.0 0.0 4.395793230504862 0.0 36 5.507684596933872E-5 0.0 0.0 4.534256421271779 0.0 37 5.507684596933872E-5 0.0 0.0 4.677951912405784 0.0 38 5.507684596933872E-5 0.0 0.0 4.8440636798493095 0.0 39 5.507684596933872E-5 0.0 0.0 5.091523948789549 0.0 40 5.507684596933872E-5 0.0 0.0 5.259177867920216 0.0 41 5.507684596933872E-5 0.0 0.0 5.429695783041288 0.0 42 5.507684596933872E-5 0.0 0.0 5.599497699164759 0.0 43 5.507684596933872E-5 0.0 0.0 5.748811028587637 0.0 44 5.507684596933872E-5 0.0 0.0 5.893332672411182 0.0 45 5.507684596933872E-5 0.0 0.0 6.049475530734257 0.0 46 5.507684596933872E-5 0.0 0.0 6.2290811254402705 0.0 47 5.507684596933872E-5 0.0 0.0 6.422786392714435 0.0 48 5.507684596933872E-5 0.0 0.0 6.598481531356625 0.0 49 5.507684596933872E-5 0.0 0.0 6.787945881491151 0.0 50 5.507684596933872E-5 0.0 0.0 6.97542746517078 0.0 51 5.507684596933872E-5 0.0 0.0 7.159604438092249 0.0 52 5.507684596933872E-5 0.0 0.0 7.383106279035824 0.0 53 5.507684596933872E-5 0.0 0.0 7.576370931542234 0.0 54 5.507684596933872E-5 0.0 0.0 7.785497715687813 0.0 55 5.507684596933872E-5 0.0 0.0 7.985591897094421 0.0 56 5.507684596933872E-5 0.0 0.0 8.192625761093165 0.0 57 5.507684596933872E-5 0.0 0.0 8.397291320715228 0.0 58 5.507684596933872E-5 0.0 0.0 8.582569830556084 0.0 59 5.507684596933872E-5 0.0 0.0 8.776275097830247 0.0 60 5.507684596933872E-5 0.0 0.0 8.98766003266057 0.0 61 5.507684596933872E-5 0.0 0.0 9.215788328665571 0.0 62 5.507684596933872E-5 0.0 0.0 9.477183039636053 0.0 63 5.507684596933872E-5 0.0 0.0 9.762260794373349 0.0 64 5.507684596933872E-5 0.0 0.0 10.004984454560224 0.0 65 5.507684596933872E-5 0.0 0.0 10.238950896237975 0.0 66 5.507684596933872E-5 0.0 0.0 10.466583500629254 0.0 67 5.507684596933872E-5 0.0 0.0 10.689699803651044 0.0 68 1.1015369193867744E-4 0.0 0.0 10.962054806969425 0.0 69 1.1015369193867744E-4 0.0 0.0 11.331675520269656 0.0 70 1.6523053790801616E-4 5.507684596933872E-5 0.0 11.584918858036676 0.0 71 1.6523053790801616E-4 5.507684596933872E-5 0.0 11.82444806115733 0.0 72 2.203073838773549E-4 5.507684596933872E-5 0.0 12.063922187432015 0.0 73 2.203073838773549E-4 5.507684596933872E-5 0.0 12.303836928474453 0.0 74 2.753842298466936E-4 5.507684596933872E-5 0.0 12.570078401890237 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGTTACG 55 0.0 72.72727 1 TATAGCG 100 0.0 72.0 1 CGTTTTT 5830 0.0 71.28645 1 TCGATTG 80 0.0 70.0 1 AGGGTCG 150 0.0 66.666664 6 CGATAGG 355 0.0 65.35211 2 CGTTTGG 385 0.0 64.41559 2 CGGGTAC 175 0.0 64.00001 6 GGCCGTA 25 1.2357187E-4 64.0 9 GGGCGAT 1785 0.0 63.64146 7 CGTTAGG 380 0.0 63.157894 2 AGGGATT 2965 0.0 63.13659 6 ACGAGGG 670 0.0 62.686565 3 TACGTAG 115 0.0 62.608696 1 GGTACGA 45 9.427822E-9 62.222225 8 TAGGGTA 1150 0.0 61.913044 5 CGAGGGA 1205 0.0 61.74274 4 GTAGCGG 340 0.0 61.176468 2 TAAGGGA 2355 0.0 60.976646 4 TAGGGAC 1820 0.0 60.87912 5 >>END_MODULE