##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547816_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2315432 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03090827111312 33.0 31.0 34.0 31.0 34.0 2 32.47934078824168 34.0 31.0 34.0 31.0 34.0 3 32.584112597562786 34.0 31.0 34.0 31.0 34.0 4 36.119600575616126 37.0 35.0 37.0 35.0 37.0 5 36.08295644182166 37.0 35.0 37.0 35.0 37.0 6 36.1247257531208 37.0 36.0 37.0 35.0 37.0 7 36.34886492023951 37.0 37.0 37.0 35.0 37.0 8 36.362824734218066 37.0 37.0 37.0 35.0 37.0 9 38.18406370819787 39.0 39.0 39.0 37.0 39.0 10-11 37.69177285275491 39.0 37.5 39.0 35.0 39.0 12-13 37.032412094157806 39.0 35.0 39.0 33.5 39.0 14-15 38.15577525057959 40.0 36.0 41.0 33.0 41.0 16-17 38.3070388160827 40.0 36.0 41.0 34.0 41.0 18-19 38.14753035286719 40.0 36.0 41.0 34.0 41.0 20-21 37.946204207249444 40.0 35.0 41.0 34.0 41.0 22-23 37.78167918556883 40.0 35.0 41.0 34.0 41.0 24-25 37.731868178378804 40.0 35.0 41.0 34.0 41.0 26-27 37.73363566712389 40.0 35.0 41.0 34.0 41.0 28-29 37.65795216616165 40.0 35.0 41.0 34.0 41.0 30-31 37.4565232319498 40.0 35.0 41.0 33.0 41.0 32-33 37.09473113440602 40.0 35.0 41.0 32.5 41.0 34-35 36.702032061403656 40.0 35.0 41.0 31.0 41.0 36-37 36.49715884551998 39.0 35.0 41.0 31.0 41.0 38-39 36.391785636546444 39.0 35.0 41.0 30.0 41.0 40-41 36.27878102228871 39.0 35.0 41.0 30.0 41.0 42-43 36.232474976591845 39.0 35.0 41.0 30.0 41.0 44-45 36.079111802894666 39.0 35.0 41.0 30.0 41.0 46-47 35.95449013402251 38.5 35.0 41.0 30.0 41.0 48-49 35.84562470415888 38.0 35.0 40.5 29.0 41.0 50-51 35.62417013326239 38.0 35.0 40.0 29.0 41.0 52-53 35.41519530696648 37.5 35.0 40.0 28.0 41.0 54-55 35.21683685808955 37.0 35.0 40.0 28.0 41.0 56-57 34.90394405881926 36.5 34.5 40.0 27.5 41.0 58-59 34.64336957423064 36.0 34.0 39.5 26.5 41.0 60-61 34.28351663965947 35.5 34.0 39.0 26.0 41.0 62-63 33.89882622335702 35.0 33.5 39.0 26.0 40.0 64-65 33.56721294341617 35.0 33.0 38.0 25.0 40.0 66-67 33.26677095246157 35.0 33.0 37.5 24.5 40.0 68-69 32.817380514737636 35.0 33.0 37.0 22.5 39.5 70-71 32.55073999150051 35.0 33.0 36.5 22.5 39.0 72-73 32.3116666781836 35.0 33.0 36.0 21.5 38.5 74-75 32.027838865490324 35.0 33.0 35.5 20.0 37.5 76-77 30.130116755750116 33.0 30.0 34.5 18.5 35.5 78-79 31.190725963880606 34.0 31.5 35.0 19.0 36.0 80-81 31.3341689585356 35.0 32.0 35.0 19.0 36.0 82-83 31.158135933164957 34.5 32.0 35.0 18.5 36.0 84-85 30.962460137028426 34.0 32.0 35.0 18.0 35.5 86 30.570153647353926 34.0 31.0 35.0 17.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 2.0 9 4.0 10 15.0 11 15.0 12 29.0 13 88.0 14 315.0 15 1071.0 16 2799.0 17 6334.0 18 14275.0 19 21548.0 20 23898.0 21 23026.0 22 19714.0 23 16768.0 24 16071.0 25 17443.0 26 20093.0 27 23822.0 28 29080.0 29 35929.0 30 45419.0 31 56445.0 32 71284.0 33 93847.0 34 238362.0 35 217129.0 36 205523.0 37 388048.0 38 523379.0 39 203287.0 40 370.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 27.365951580525795 24.756460133573345 31.607103987506434 16.270484298394425 2 30.993568370826697 25.532643584436943 31.254685950613105 12.219102094123256 3 27.968430945067702 24.458589153125637 34.778736754091675 12.794243147714985 4 25.834487905496683 26.375898752371047 33.63691958995125 14.152693752181019 5 24.087600067719546 30.81390427358696 31.21572993722122 13.882765721472278 6 21.6789350756144 39.421023808947965 28.057874297323348 10.842166818114288 7 87.5983401801478 3.479134779168639 7.572453002290717 1.3500720383928355 8 89.36207152704118 2.18201182327963 7.132319152538273 1.3235974971409223 9 85.31954296217725 4.576208672938787 8.228270145700673 1.8759782191832886 10-11 38.87555324449174 25.5972967463523 22.28519343258623 13.24195657656973 12-13 29.270369417024554 23.761570195108302 28.60146616268584 18.366594225181306 14-15 18.833224210428117 29.095628807064944 34.35570554436494 17.715441438141998 16-17 24.580704594218272 24.64095253067246 31.568990149570357 19.209352725538906 18-19 25.407807268794762 27.868514385220557 28.807540018450123 17.916138327534558 20-21 26.805365046349884 27.19635040027088 29.04691219608263 16.951372357296606 22-23 23.118774379899733 23.568323319363298 32.1525529577202 21.16034934301677 24-25 21.840503197675424 26.355880889613687 32.30742686461965 19.496189048091242 26-27 19.528407657836638 30.643029033027098 29.854256138811248 19.97430717032502 28-29 19.301970431435688 27.509099813771254 33.68388706729457 19.505042687498488 30-31 23.76018816359107 25.956797694771428 31.197180482950916 19.085833658686585 32-33 26.077401538892094 26.373221066306417 28.715116660735447 18.834260734066042 34-35 21.251239509517013 27.7036207498212 30.092008748259502 20.953130992402283 36-37 23.626066323692513 29.15166586624008 28.568556537181834 18.65371127288558 38-39 22.14703346934827 29.223704259075628 27.341658057762007 21.287604213814095 40-41 22.00729712641097 26.230353558212894 28.80786393208697 22.954485383289168 42-43 21.778009460005734 26.53098860169506 28.327435225910325 23.363566712388874 44-45 21.74369620874204 28.3776202453797 28.237452017593263 21.641231528285 46-47 22.35232993238411 28.339506407443622 28.157682885958213 21.150480774214056 48-49 22.338358457514623 26.24449778702203 30.259731229420687 21.157412526042656 50-51 20.189450607921113 28.781454173562427 29.157841819582696 21.871253398933764 52-53 22.51059413534926 25.589976298159478 29.61812309754724 22.281306468944024 54-55 22.380208099395706 25.754740368104095 30.373705641107147 21.491345891393053 56-57 22.624611735520627 26.110958991669804 28.924494435595605 22.339934837213963 58-59 23.046779175549098 27.68064447584727 27.98767141509662 21.284904933507008 60-61 25.156925359932835 27.8684927909781 26.73250607230098 20.24207577678809 62-63 23.835076996430903 25.4722228940431 29.25492953366802 21.437770575857982 64-65 22.24522248979888 28.261443220962658 29.092454453423812 20.400879835814656 66-67 21.478389345919034 28.84204761789593 26.370025118422824 23.309537917762217 68-69 20.24116881860491 30.257161514568338 27.273528222811123 22.22814144401563 70-71 21.035037954040543 28.363886307177232 28.853125464276214 21.74795027450601 72-73 23.02708522642859 29.330638947721205 26.97455593599812 20.667719889852087 74-75 21.512529843243076 30.40650729539887 26.00292299665894 22.078039864699115 76-77 23.671586986791233 27.77477377871602 27.19835866481935 21.35528056967339 78-79 20.626777206154188 28.55326781352249 28.227453883335805 22.592501096987515 80-81 19.322873658133773 28.11382497952866 28.724510156204115 23.838791206133454 82-83 20.85507153740641 28.030600769100538 29.203556830863526 21.910770862629523 84-85 19.337644119974158 27.210991296656523 28.538842859561413 24.912521723807913 86 20.40889129976609 26.919771342885472 29.756606974422052 22.914730382926383 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 965.0 1 1082.0 2 5656.0 3 6560.5 4 3229.0 5 3748.0 6 4355.0 7 4664.0 8 4809.0 9 5107.5 10 5375.5 11 5500.0 12 5629.5 13 5797.0 14 5845.0 15 6057.0 16 6201.0 17 6224.5 18 6423.0 19 6772.0 20 7207.0 21 7400.0 22 7695.5 23 8307.5 24 9362.0 25 11099.5 26 13460.0 27 15691.5 28 18329.5 29 20097.0 30 22853.5 31 27308.0 32 31655.5 33 35848.5 34 39930.0 35 44608.0 36 46748.0 37 51842.5 38 58913.0 39 67734.0 40 76428.0 41 86990.0 42 97921.5 43 100140.0 44 105854.5 45 114840.0 46 121763.5 47 126238.5 48 130431.5 49 127226.0 50 120650.0 51 110573.5 52 95941.0 53 87326.0 54 82996.0 55 80076.5 56 72254.5 57 67081.0 58 60836.0 59 47323.0 60 35193.5 61 27033.0 62 20341.0 63 14645.5 64 12343.0 65 10326.0 66 7361.5 67 5219.0 68 3219.5 69 2118.5 70 1409.5 71 997.0 72 1000.0 73 695.0 74 365.5 75 247.5 76 103.0 77 75.5 78 77.0 79 58.0 80 44.5 81 22.5 82 11.5 83 10.5 84 10.5 85 11.0 86 13.0 87 10.0 88 4.5 89 1.0 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2315432.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.265044249744385 #Duplication Level Percentage of deduplicated Percentage of total 1 79.68900461897277 15.352122002025952 2 7.207409220395054 2.777021151138528 3 2.5027823049966305 1.4464863555971197 4 1.2848817703245934 0.9901321664397276 5 0.816327427511839 0.786329200664779 6 0.6149037713420468 0.710768901854354 7 0.44061204736580906 0.5941887412630946 8 0.378727936113915 0.5836968358279149 9 0.3135745118854893 0.5436924162359352 >10 4.019147759608501 18.79263157121609 >50 1.505434078626292 20.91847790802391 >100 1.2224502441470093 34.82305350048105 >500 0.003388791935768561 0.44498410447668835 >1k 0.0011295973119228538 0.3588511288546846 >5k 0.0 0.0 >10k+ 2.2591946238457078E-4 0.8775640159001825 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20163 0.8708094213088529 No Hit AGGGCAGGGACTTAATCAACGCAAGCTTATGACCCGCACTTACTGGGAAT 2589 0.11181498744078859 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.2956545474019534E-4 0.0 0.0 0.0111426291076568 0.0 2 1.2956545474019534E-4 0.0 0.0 0.06227779524512057 0.0 3 1.2956545474019534E-4 0.0 0.0 0.11332658441275753 0.0 4 1.2956545474019534E-4 0.0 0.0 0.20009225060377503 0.0 5 1.2956545474019534E-4 0.0 0.0 0.4005731975717706 0.0 6 1.2956545474019534E-4 0.0 0.0 0.6092167681883985 0.0 7 1.2956545474019534E-4 0.0 0.0 0.7439648411182017 0.0 8 1.2956545474019534E-4 0.0 0.0 0.9661264075127233 0.0 9 1.2956545474019534E-4 0.0 0.0 1.0632573100829565 0.0 10 1.2956545474019534E-4 0.0 0.0 1.2405892291373706 0.0 11 1.2956545474019534E-4 0.0 0.0 1.5214439465292007 0.0 12 1.2956545474019534E-4 0.0 0.0 1.7401504341306504 0.0 13 1.2956545474019534E-4 0.0 0.0 1.820869712433792 0.0 14 1.2956545474019534E-4 0.0 0.0 1.8606031185541185 0.0 15 1.2956545474019534E-4 0.0 0.0 1.905303200439486 0.0 16 1.2956545474019534E-4 0.0 0.0 2.0079190405937206 0.0 17 1.2956545474019534E-4 0.0 0.0 2.1337702856313636 0.0 18 1.2956545474019534E-4 0.0 0.0 2.282597804642935 0.0 19 1.2956545474019534E-4 0.0 0.0 2.3900939435923836 0.0 20 1.2956545474019534E-4 0.0 0.0 2.5111512668046396 0.0 21 1.2956545474019534E-4 0.0 0.0 2.6598924088463836 0.0 22 1.2956545474019534E-4 0.0 0.0 2.825217929094873 0.0 23 1.2956545474019534E-4 0.0 0.0 2.9857063390330616 0.0 24 1.2956545474019534E-4 0.0 0.0 3.1037404683013796 0.0 25 1.2956545474019534E-4 0.0 0.0 3.2127913927077105 0.0 26 1.2956545474019534E-4 0.0 0.0 3.3246495686334128 0.0 27 1.2956545474019534E-4 0.0 0.0 3.4547332851925687 0.0 28 1.2956545474019534E-4 0.0 0.0 3.5861990332689535 0.0 29 1.2956545474019534E-4 0.0 0.0 3.7339036516727764 0.0 30 1.2956545474019534E-4 0.0 0.0 3.8837245058373555 0.0 31 1.2956545474019534E-4 0.0 0.0 4.027758103023539 0.0 32 1.2956545474019534E-4 0.0 0.0 4.162678929892996 0.0 33 1.2956545474019534E-4 0.0 0.0 4.292158007663365 0.0 34 1.2956545474019534E-4 0.0 0.0 4.443404081830086 0.0 35 1.2956545474019534E-4 0.0 0.0 4.602337706311393 0.0 36 1.2956545474019534E-4 0.0 0.0 4.751337979262617 0.0 37 1.2956545474019534E-4 0.0 0.0 4.920032201334352 0.0 38 1.2956545474019534E-4 0.0 0.0 5.126257216795829 0.0 39 1.2956545474019534E-4 0.0 0.0 5.469432917917693 0.0 40 1.2956545474019534E-4 0.0 0.0 5.682093017631267 0.0 41 1.2956545474019534E-4 0.0 0.0 5.892032242795297 0.0 42 1.2956545474019534E-4 0.0 0.0 6.095838703101625 0.0 43 1.727539396535938E-4 0.0 0.0 6.267426553662556 0.0 44 1.727539396535938E-4 0.0 0.0 6.437330053311865 0.0 45 1.727539396535938E-4 0.0 0.0 6.600496149314685 0.0 46 1.727539396535938E-4 0.0 0.0 6.797565205974522 0.0 47 1.727539396535938E-4 0.0 0.0 7.005474572347622 0.0 48 1.727539396535938E-4 0.0 0.0 7.195935790815709 0.0 49 1.727539396535938E-4 0.0 0.0 7.395812098994917 0.0 50 1.727539396535938E-4 0.0 0.0 7.587525783525494 0.0 51 2.1594242456699224E-4 0.0 0.0 7.802258930514911 0.0 52 2.1594242456699224E-4 0.0 0.0 8.059489546659112 0.0 53 2.591309094803907E-4 0.0 0.0 8.2560835299849 0.0 54 2.591309094803907E-4 0.0 0.0 8.455312010890408 0.0 55 2.591309094803907E-4 0.0 0.0 8.645989171783063 0.0 56 2.591309094803907E-4 0.0 0.0 8.871303497576262 0.0 57 2.591309094803907E-4 0.0 0.0 9.087245922143255 0.0 58 2.591309094803907E-4 0.0 0.0 9.297487466701678 0.0 59 2.591309094803907E-4 0.0 0.0 9.509283796716984 0.0 60 2.591309094803907E-4 0.0 0.0 9.7317476825059 0.0 61 2.591309094803907E-4 0.0 0.0 9.967470433163228 0.0 62 2.591309094803907E-4 0.0 0.0 10.2803710063608 0.0 63 2.591309094803907E-4 0.0 0.0 10.555395278289321 0.0 64 2.591309094803907E-4 0.0 0.0 10.80420413987541 0.0 65 2.591309094803907E-4 0.0 0.0 11.040013267502566 0.0 66 2.591309094803907E-4 0.0 0.0 11.266104986024207 0.0 67 2.591309094803907E-4 0.0 0.0 11.500532082134134 0.0 68 2.591309094803907E-4 0.0 0.0 11.78821058014228 0.0 69 2.591309094803907E-4 0.0 0.0 12.244928808101468 0.0 70 3.0231939439378917E-4 0.0 0.0 12.520514530333864 0.0 71 3.0231939439378917E-4 0.0 0.0 12.780897905876744 0.0 72 3.0231939439378917E-4 0.0 0.0 13.028842997764563 0.0 73 3.0231939439378917E-4 0.0 0.0 13.279120267837708 0.0 74 3.455078793071876E-4 0.0 0.0 13.569174132516093 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 11300 0.0 73.9469 1 TACGGGA 665 0.0 66.16541 4 AATCGCG 55 9.094947E-12 65.454544 1 CCGATCC 2215 0.0 64.8307 80 ATAGCGG 495 0.0 64.64647 2 GGGCGAT 1965 0.0 63.715008 7 TTACGGG 810 0.0 62.716045 3 ACGGGTA 305 0.0 61.639347 5 CGGGATC 690 0.0 61.44928 6 AGGGATT 3985 0.0 60.92848 6 GCGCGAC 125 0.0 60.8 9 TGCGGGA 1860 0.0 60.64516 4 TAGGGTA 1690 0.0 60.35503 5 TAGTAGG 1445 0.0 60.34602 2 ACGAGGG 1150 0.0 60.173912 3 GTAGGGT 1645 0.0 59.817627 4 CGTAAGG 515 0.0 59.805824 2 TAGGGAT 3640 0.0 59.670326 5 CGGGATT 1305 0.0 59.463604 6 TATGCGG 545 0.0 59.44954 2 >>END_MODULE