##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547815_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1589241 Sequences flagged as poor quality 0 Sequence length 86 %GC 45 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.03919732752931 33.0 31.0 34.0 31.0 34.0 2 32.473562537085314 34.0 31.0 34.0 31.0 34.0 3 32.592951603941756 34.0 31.0 34.0 31.0 34.0 4 36.11025640541617 37.0 35.0 37.0 35.0 37.0 5 36.06355549598834 37.0 35.0 37.0 35.0 37.0 6 36.12922709645674 37.0 36.0 37.0 35.0 37.0 7 36.33994151925353 37.0 37.0 37.0 35.0 37.0 8 36.3464578374205 37.0 37.0 37.0 35.0 37.0 9 38.14808452588374 39.0 39.0 39.0 37.0 39.0 10-11 37.6898909605277 39.0 37.5 39.0 35.0 39.0 12-13 36.84551304679404 39.0 35.0 39.0 33.5 39.0 14-15 37.94021422804974 40.0 35.0 41.0 33.0 41.0 16-17 38.09746004539274 40.0 35.0 41.0 34.0 41.0 18-19 37.96791864795837 40.0 36.0 41.0 34.0 41.0 20-21 37.78721918198687 40.0 35.0 41.0 34.0 41.0 22-23 37.606093411886555 39.5 35.0 41.0 33.0 41.0 24-25 37.57670233778263 39.0 35.0 41.0 34.0 41.0 26-27 37.55977601886687 40.0 35.0 41.0 34.0 41.0 28-29 37.49902154550506 40.0 35.0 41.0 33.0 41.0 30-31 37.33866921379451 39.0 35.0 41.0 33.0 41.0 32-33 37.048917376282134 39.0 35.0 41.0 32.5 41.0 34-35 36.76808898084054 39.0 35.0 41.0 32.0 41.0 36-37 36.57459535715476 39.0 35.0 41.0 31.0 41.0 38-39 36.496410236081246 39.0 35.0 41.0 31.0 41.0 40-41 36.38396536459857 39.0 35.0 41.0 31.0 41.0 42-43 36.32411950107001 39.0 35.0 41.0 31.0 41.0 44-45 36.184631217040085 38.0 35.0 41.0 30.5 41.0 46-47 36.05141416563001 38.0 35.0 41.0 30.0 41.0 48-49 35.964446235655885 38.0 35.0 40.0 30.0 41.0 50-51 35.73255283496965 37.5 35.0 40.0 30.0 41.0 52-53 35.54407009383725 37.0 35.0 40.0 29.0 41.0 54-55 35.35309717028443 37.0 35.0 40.0 29.0 41.0 56-57 35.04444543023997 36.0 34.5 40.0 28.5 41.0 58-59 34.78269029052233 36.0 34.0 39.5 28.0 41.0 60-61 34.429904904290794 35.0 34.0 39.0 27.0 41.0 62-63 34.02015207259314 35.0 33.5 39.0 26.0 40.0 64-65 33.69896541808322 35.0 33.5 38.0 26.0 40.0 66-67 33.40800797361759 35.0 33.0 37.0 25.5 40.0 68-69 32.9940377198927 35.0 33.0 37.0 24.5 39.0 70-71 32.70550690549766 35.0 33.0 36.0 24.0 39.0 72-73 32.47599105484946 35.0 33.0 36.0 24.0 38.5 74-75 32.209331372648954 35.0 33.0 35.0 23.5 37.5 76-77 30.28233162874605 33.0 30.0 34.5 19.5 35.5 78-79 31.277383983926917 34.0 31.5 35.0 20.0 36.0 80-81 31.51424390636788 35.0 32.0 35.0 20.0 36.0 82-83 31.34549700139878 34.5 32.0 35.0 19.5 36.0 84-85 31.15660211383925 34.0 32.0 35.0 19.0 35.5 86 30.755108256079474 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 5.0 10 13.0 11 20.0 12 32.0 13 88.0 14 220.0 15 561.0 16 1586.0 17 3538.0 18 6866.0 19 10425.0 20 12824.0 21 13212.0 22 11981.0 23 10966.0 24 10978.0 25 12183.0 26 14439.0 27 17172.0 28 20854.0 29 25632.0 30 32291.0 31 40483.0 32 50897.0 33 68473.0 34 190462.0 35 171055.0 36 134563.0 37 252388.0 38 342655.0 39 132007.0 40 372.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.23669789541045 23.612403656839966 31.76421952365941 14.38667892409018 2 31.30670552798474 25.663193939748595 30.37456244836372 12.655538083902945 3 28.93519610933773 25.220466876955726 32.86078071230229 12.983556301404256 4 27.126282294504104 26.316587603768088 32.04026324515917 14.516866856568639 5 23.9764768213254 31.04047781299375 30.572896118335734 14.410149247345117 6 22.249551830087444 40.98440702196835 26.32457883983612 10.441462308108084 7 87.62151240749515 3.729264472789212 6.776127723863152 1.8730953958524854 8 89.30105629039271 2.5711015509919517 6.426401030428991 1.701441128186348 9 85.05022208714726 4.951671898723982 7.438078932018493 2.560027082110265 10-11 42.04925495881367 25.811000345447923 19.287099942677038 12.852644753061368 12-13 30.802880116986664 25.596558357102538 26.281728196038234 17.31883332987256 14-15 17.44247725801184 30.4558905792136 34.19336651898611 17.90826564378845 16-17 22.747777083526035 24.47234245781477 32.07141018888891 20.708470269770288 18-19 25.30623108767015 27.25989953694877 28.784275009265432 18.64959436611565 20-21 27.774736493709888 27.432120112682725 27.922888976561765 16.870254417045622 22-23 23.140700497910636 24.42515011883031 30.402752005517097 22.031397377741953 24-25 21.04658764781427 26.003828242538418 33.71521374039557 19.23437036925174 26-27 19.247804455082644 32.43683620042523 28.967538592321745 19.347820752170374 28-29 17.946868977077738 27.68208220150374 34.63433173445689 19.73671708696164 30-31 23.88913953264483 27.653420720960508 29.0640311947653 19.393408551629364 32-33 26.812516163376106 26.94446594317665 27.79002681154086 18.452991081906394 34-35 20.965762901913553 26.88528675009014 30.20898026164691 21.939970086349394 36-37 23.514023360837026 28.98732791313589 28.7940910157742 18.70455771025288 38-39 21.734180026817835 29.755430422446942 27.0491700126035 21.461219538131722 40-41 22.27258169151186 25.48660020726875 28.73195443611133 23.508863665108063 42-43 21.849927103567047 26.11089192891449 28.007552032699884 24.03162893481857 44-45 21.256750864091728 29.349607768739922 27.26999869749144 22.123642669676908 46-47 21.94245554953591 29.00154853794988 27.342297360815635 21.713698551698577 48-49 21.797606530412946 25.87348300226334 30.997438399839922 21.331472067483787 50-51 20.195898545280418 29.55071005593236 28.501215360036646 21.752176038750573 52-53 22.97697454319389 25.340303956416932 29.92604645865542 21.756675041733757 54-55 22.983927547804267 25.8834248550094 29.956815863673285 21.175831733513043 56-57 23.450722703479208 24.825718692130394 28.76860715272259 22.95495145166781 58-59 24.255761083435427 26.622991730014515 27.946610992291287 21.17463619425877 60-61 25.11220765132538 27.87154371174668 26.715520175983375 20.300728460944566 62-63 23.624264664704725 25.123533812681654 29.997778813911797 21.254422708701824 64-65 20.64287291858189 29.482753087794737 29.533091582711496 20.341282410911877 66-67 20.384951055252163 28.233980875147317 26.005558628301184 25.375509441299336 68-69 19.69987560099444 30.564558805115144 25.86209391778843 23.873471676101985 70-71 20.39722106338812 28.962032819440225 28.843800279504496 21.796945837667163 72-73 22.680229115659614 29.96458686882606 26.71470217544098 20.640481840073342 74-75 22.254963218290996 31.263917807305504 24.572201447105883 21.90891752729762 76-77 25.490753133099386 27.43422803715736 26.06788397731999 21.007134852423263 78-79 19.81124952099776 28.448171171018117 29.43109320738642 22.309486100597706 80-81 18.582235167605166 27.88607895215389 29.284985725890532 24.24670015435041 82-83 19.882761645338874 27.376244383325123 29.97314441296191 22.767849558374092 84-85 18.24773586888332 26.54839637285975 29.045059874493546 26.15880788376338 86 19.66083180587463 26.974700501686026 29.860795184619576 23.50367250781977 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 631.0 1 895.5 2 2995.5 3 3180.5 4 1634.0 5 1945.0 6 2231.5 7 2311.0 8 2462.5 9 2610.5 10 2661.5 11 2717.5 12 2834.0 13 2968.0 14 2987.0 15 2979.5 16 3114.5 17 3287.5 18 3360.5 19 3439.0 20 3895.0 21 4315.0 22 4663.0 23 5461.5 24 6299.5 25 7569.0 26 9267.5 27 10666.5 28 12935.5 29 14622.0 30 15407.5 31 18763.0 32 21773.0 33 23773.5 34 27510.0 35 31261.0 36 32836.0 37 34014.5 38 38366.5 39 47082.0 40 56204.0 41 64433.5 42 72120.0 43 75157.0 44 78485.5 45 84029.0 46 88694.0 47 95831.0 48 99523.5 49 91126.5 50 83724.0 51 74117.0 52 60018.5 53 55204.5 54 53497.5 55 49597.0 56 44845.5 57 42610.0 58 39347.0 59 30410.5 60 21283.5 61 16946.5 62 14087.0 63 10381.5 64 8652.0 65 7087.5 66 4707.0 67 3514.0 68 2754.5 69 2006.0 70 1518.5 71 1397.0 72 1140.0 73 758.5 74 509.0 75 259.5 76 164.0 77 128.0 78 51.0 79 39.0 80 39.0 81 29.0 82 17.5 83 12.0 84 8.0 85 6.5 86 5.0 87 2.5 88 1.5 89 2.0 90 1.0 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1589241.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.51121860325866 #Duplication Level Percentage of deduplicated Percentage of total 1 79.70858710159625 13.957944932929353 2 8.20273732848082 2.8727985300827514 3 2.4983450497137447 1.312471989357195 4 1.24521525378958 0.8722094606888617 5 0.7029564813084245 0.6154812306384664 6 0.45510590757802544 0.478167542113994 7 0.37028194041334384 0.4538861602391802 8 0.2824478879797428 0.39568053683535914 9 0.23506304510839152 0.3704616331596626 >10 3.1630480686964106 13.682631106820903 >50 1.4754163095321529 18.690274610164174 >100 1.654628407446098 44.98781616461762 >500 0.005078885705820076 0.6373005556051345 >1k 7.255551008314394E-4 0.14661978492191494 >5k 3.627775504157197E-4 0.5262557618254521 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8284 0.5212551148630069 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.292311864594483E-5 0.0 0.0 0.020953398509099625 0.0 2 6.292311864594483E-5 0.0 0.0 0.1118773049524899 0.0 3 6.292311864594483E-5 0.0 0.0 0.18159612041219678 0.0 4 6.292311864594483E-5 0.0 0.0 0.3203415970265051 0.0 5 6.292311864594483E-5 0.0 0.0 0.6191005643574511 0.0 6 6.292311864594483E-5 0.0 0.0 0.8624242641613198 0.0 7 6.292311864594483E-5 0.0 0.0 1.0126217483691902 0.0 8 6.292311864594483E-5 0.0 0.0 1.301250093598139 0.0 9 6.292311864594483E-5 0.0 0.0 1.3921110769228833 0.0 10 6.292311864594483E-5 0.0 0.0 1.5789927393013394 0.0 11 6.292311864594483E-5 0.0 0.0 1.9265800467015386 0.0 12 6.292311864594483E-5 0.0 0.0 2.196771918167226 0.0 13 6.292311864594483E-5 0.0 0.0 2.2943656751870862 0.0 14 6.292311864594483E-5 0.0 0.0 2.3316790845441315 0.0 15 6.292311864594483E-5 0.0 0.0 2.3940358951222627 0.0 16 6.292311864594483E-5 0.0 0.0 2.5244125969566604 0.0 17 6.292311864594483E-5 0.0 0.0 2.6839227027241304 0.0 18 6.292311864594483E-5 0.0 0.0 2.872377443068735 0.0 19 6.292311864594483E-5 0.0 0.0 2.9997338352081275 0.0 20 6.292311864594483E-5 0.0 0.0 3.145212085517552 0.0 21 6.292311864594483E-5 0.0 0.0 3.3340443645740323 0.0 22 6.292311864594483E-5 0.0 0.0 3.5302386485120887 0.0 23 6.292311864594483E-5 0.0 0.0 3.7181900039075257 0.0 24 1.2584623729188966E-4 0.0 0.0 3.8573759423523555 0.0 25 1.2584623729188966E-4 0.0 0.0 3.983788487712059 0.0 26 1.2584623729188966E-4 0.0 0.0 4.113535958359997 0.0 27 1.2584623729188966E-4 0.0 0.0 4.2422766591096 0.0 28 1.2584623729188966E-4 0.0 0.0 4.381399674435784 0.0 29 1.2584623729188966E-4 0.0 0.0 4.544559321084719 0.0 30 1.2584623729188966E-4 0.0 0.0 4.719233898445862 0.0 31 1.2584623729188966E-4 0.0 0.0 4.884344161772821 0.0 32 1.2584623729188966E-4 0.0 0.0 5.035674262116318 0.0 33 1.2584623729188966E-4 0.0 0.0 5.191975288832845 0.0 34 1.2584623729188966E-4 0.0 0.0 5.3625598634820015 0.0 35 1.2584623729188966E-4 0.0 0.0 5.5506370651147305 0.0 36 1.2584623729188966E-4 0.0 0.0 5.725248719357228 0.0 37 1.2584623729188966E-4 0.0 0.0 5.911438227430579 0.0 38 1.2584623729188966E-4 0.0 0.0 6.1156866705553155 0.0 39 1.2584623729188966E-4 0.0 0.0 6.3928630081907025 0.0 40 1.2584623729188966E-4 0.0 0.0 6.603340840061388 0.0 41 1.2584623729188966E-4 0.0 0.0 6.824767294576468 0.0 42 1.2584623729188966E-4 0.0 0.0 7.0384542054980965 0.0 43 1.2584623729188966E-4 0.0 0.0 7.218414324825498 0.0 44 1.2584623729188966E-4 0.0 0.0 7.391767516695077 0.0 45 1.2584623729188966E-4 0.0 0.0 7.567952248903722 0.0 46 1.2584623729188966E-4 0.0 0.0 7.787553932978069 0.0 47 1.8876935593783447E-4 0.0 0.0 8.025466244578388 0.0 48 1.8876935593783447E-4 0.0 0.0 8.231036073194689 0.0 49 1.8876935593783447E-4 0.0 0.0 8.441136366353499 0.0 50 1.8876935593783447E-4 0.0 0.0 8.653061429953041 0.0 51 1.8876935593783447E-4 0.0 0.0 8.860770644603305 0.0 52 1.8876935593783447E-4 0.0 0.0 9.095033415322156 0.0 53 1.8876935593783447E-4 0.0 0.0 9.300099858989292 0.0 54 1.8876935593783447E-4 0.0 0.0 9.519449850589055 0.0 55 1.8876935593783447E-4 0.0 0.0 9.737730149171837 0.0 56 1.8876935593783447E-4 0.0 0.0 9.981997695755394 0.0 57 1.8876935593783447E-4 0.0 0.0 10.203424150270475 0.0 58 3.146155932297241E-4 0.0 0.0 10.415726752581893 0.0 59 3.146155932297241E-4 0.0 0.0 10.636083514079992 0.0 60 3.146155932297241E-4 0.0 0.0 10.876827366019377 0.0 61 3.146155932297241E-4 0.0 0.0 11.120969066365642 0.0 62 3.146155932297241E-4 0.0 0.0 11.407709718035212 0.0 63 3.146155932297241E-4 0.0 0.0 11.69979883478969 0.0 64 3.146155932297241E-4 0.0 0.0 11.950358693237842 0.0 65 3.146155932297241E-4 0.0 0.0 12.194689162940046 0.0 66 3.146155932297241E-4 0.0 0.0 12.420142697048465 0.0 67 3.146155932297241E-4 0.0 0.0 12.661264087699726 0.0 68 3.146155932297241E-4 0.0 0.0 12.936741501131673 0.0 69 3.146155932297241E-4 0.0 0.0 13.318244369482036 0.0 70 3.146155932297241E-4 0.0 0.0 13.589317164608767 0.0 71 3.7753871187566894E-4 0.0 0.0 13.837548867667019 0.0 72 4.404618305216138E-4 0.0 0.0 14.074706101843585 0.0 73 4.404618305216138E-4 0.0 0.0 14.324636729105277 0.0 74 4.404618305216138E-4 0.0 0.0 14.606154761927234 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 4490 0.0 72.69488 1 CGAGGGA 760 0.0 71.57895 4 TACGCGG 45 1.1823431E-10 71.111115 2 TCGCACG 30 3.7962527E-6 66.666664 1 TAGGGTA 1000 0.0 66.4 5 TTGCGGG 1195 0.0 65.6067 3 TTTAGCG 160 0.0 65.0 1 TATTGCG 235 0.0 64.680855 1 AGGGATT 2795 0.0 64.40071 6 TTAGCGG 390 0.0 63.58974 2 CGTAAGG 330 0.0 63.0303 2 TAGGGAT 2400 0.0 62.0 5 TAGCGCG 130 0.0 61.53846 1 AATGCGG 340 0.0 61.17647 2 TACGGGA 715 0.0 60.979023 4 TGGTACG 125 0.0 60.8 1 TAGCGGG 1360 0.0 60.000004 3 CCGATCC 935 0.0 59.89305 80 GCGCGAC 115 0.0 59.130436 9 TCGATGG 230 0.0 59.130436 2 >>END_MODULE