##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547814_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1807192 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.14029333905861 33.0 31.0 34.0 31.0 34.0 2 32.58815720742456 34.0 31.0 34.0 31.0 34.0 3 32.70102678630715 34.0 31.0 34.0 31.0 34.0 4 36.20962133519847 37.0 35.0 37.0 35.0 37.0 5 36.1898248774895 37.0 35.0 37.0 35.0 37.0 6 36.25246459701017 37.0 37.0 37.0 35.0 37.0 7 36.395490905227554 37.0 37.0 37.0 35.0 37.0 8 36.38895092497089 37.0 37.0 37.0 35.0 37.0 9 38.18998313405549 39.0 39.0 39.0 37.0 39.0 10-11 37.860056928096185 39.0 38.0 39.0 35.0 39.0 12-13 37.19055999583885 39.0 36.0 39.0 34.5 39.0 14-15 38.357671459369016 40.0 37.0 41.0 34.0 41.0 16-17 38.53563456456204 40.0 37.0 41.0 35.0 41.0 18-19 38.409223259067105 40.0 36.0 41.0 35.0 41.0 20-21 38.21244947963471 40.0 35.0 41.0 34.0 41.0 22-23 38.03772676063196 40.0 35.0 41.0 34.0 41.0 24-25 38.01598225313083 40.0 35.0 41.0 34.0 41.0 26-27 37.99182737639387 40.0 35.0 41.0 34.0 41.0 28-29 37.927559993625465 40.0 35.0 41.0 34.0 41.0 30-31 37.769458364136185 40.0 35.5 41.0 34.0 41.0 32-33 37.46155140128995 40.0 35.0 41.0 33.0 41.0 34-35 37.13816987901673 40.0 35.0 41.0 33.0 41.0 36-37 36.95601325149735 40.0 35.0 41.0 32.0 41.0 38-39 36.854760313237335 40.0 35.0 41.0 32.0 41.0 40-41 36.72654648758959 40.0 35.0 41.0 31.5 41.0 42-43 36.67579648426952 39.0 35.0 41.0 32.0 41.0 44-45 36.55378426863332 39.0 35.0 41.0 31.0 41.0 46-47 36.429039913855306 39.0 35.0 41.0 31.0 41.0 48-49 36.318993222634894 39.0 35.0 41.0 31.0 41.0 50-51 36.091231866896266 38.0 35.0 40.5 30.5 41.0 52-53 35.89268157450896 38.0 35.0 40.0 30.0 41.0 54-55 35.72892005940708 38.0 35.0 40.0 30.0 41.0 56-57 35.45196857887817 37.0 35.0 40.0 29.5 41.0 58-59 35.225003762743526 37.0 35.0 40.0 29.0 41.0 60-61 34.88988303401078 36.0 34.5 39.5 28.5 41.0 62-63 34.53317743770446 35.5 34.0 39.0 27.5 41.0 64-65 34.22600725324149 35.0 34.0 39.0 27.0 40.0 66-67 33.93972970221205 35.0 34.0 38.0 26.5 40.0 68-69 33.491413474605906 35.0 34.0 37.5 25.5 40.0 70-71 33.25086432432193 35.0 33.5 37.0 26.0 39.0 72-73 32.98052558886936 35.0 33.0 36.5 25.0 39.0 74-75 32.690129493711794 35.0 33.0 36.0 25.0 38.5 76-77 30.78397259394685 33.5 30.0 34.5 21.5 36.0 78-79 31.83755378509865 34.5 32.0 35.0 23.5 37.0 80-81 32.01047536731017 35.0 33.0 35.0 24.0 37.0 82-83 31.84857364353096 35.0 33.0 35.0 23.5 36.0 84-85 31.64965980371759 35.0 33.0 35.0 23.0 36.0 86 31.22207601627276 34.0 32.0 35.0 20.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 1.0 9 8.0 10 9.0 11 19.0 12 47.0 13 67.0 14 225.0 15 595.0 16 1491.0 17 3573.0 18 7719.0 19 12309.0 20 15022.0 21 15314.0 22 13434.0 23 11606.0 24 10915.0 25 11380.0 26 12780.0 27 15426.0 28 18446.0 29 23062.0 30 28963.0 31 37807.0 32 49071.0 33 68709.0 34 185253.0 35 170687.0 36 160569.0 37 294817.0 38 435899.0 39 201538.0 40 430.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.42455699228417 23.619460466845805 29.68727174533752 14.268710795532517 2 31.98315397589188 25.287185866249963 29.52093634765979 13.208723810198364 3 29.484747608444483 25.63988773744018 31.575615651242366 13.299749002872966 4 26.59385389045547 26.888288571441223 32.65120695532074 13.866650582782572 5 24.005750357460634 31.623645965674925 29.67792022098371 14.692683455880726 6 22.13710552060877 40.709011549409254 26.397693216880107 10.756189713101874 7 87.19040367597908 3.821287389497076 7.157955546505297 1.8303533880185394 8 88.3455106042966 3.024249775342078 6.779910490971629 1.8503291293896829 9 83.93706922120062 5.614788024736718 7.631673889658652 2.816468864404004 10-11 38.83668697072585 28.917984364693954 20.49884572308864 11.746482941491552 12-13 28.467478829034214 25.498618851787747 28.75209164272529 17.281810676452753 14-15 17.158470157017074 30.454318080203986 34.58871553216261 17.798496230616337 16-17 23.154844642959908 26.33237088256256 31.132248261391155 19.38053621308638 18-19 24.864679569188 27.846460143692536 29.366331856272048 17.922528430847414 20-21 26.60093670180036 27.448522348483174 29.776166561162288 16.174374388554178 22-23 22.252450210049624 23.94410776497461 32.46752420329439 21.33591782168137 24-25 20.965453587665284 27.382646669529304 32.900876055228224 18.75102368757719 26-27 19.301435597324467 32.28121306424552 29.147511719839397 19.26983961859061 28-29 17.928808892469643 28.543757387150897 34.29848627041288 19.228947449966576 30-31 23.110992080531563 27.374982846316275 30.439267106096086 19.074757967056076 32-33 25.762066233139592 27.195726851380485 28.302360789556396 18.73984612592353 34-35 20.45507616235574 28.278815975280992 30.17761809481228 21.088489767550985 36-37 23.26186149562415 29.523288062364156 28.68616062930779 18.52868981270391 38-39 20.908874098601586 30.200858569537715 27.953919672065837 20.936347659794862 40-41 21.640312706120877 26.911971721875705 28.702871637324645 22.74484393467877 42-43 21.199186362046753 26.421736041328202 29.285875546151157 23.093202050473884 44-45 20.432527368425713 29.69476956515965 28.84101412578188 21.031688940632762 46-47 21.590373352693017 29.544647165326097 28.13685540883315 20.728124073147733 48-49 21.734464295990684 26.885355844868723 30.843955705868552 20.536224153272038 50-51 20.236145356995824 29.437270638648243 29.23446982943705 21.09211417491888 52-53 22.169254843978948 26.74713035471605 29.414140832850077 21.66947396845493 54-55 21.708733770401818 27.08021615854873 30.386561029486632 20.82448904156282 56-57 22.011855962177787 26.125558324738048 29.301673535518084 22.56091217756608 58-59 23.72307424999668 27.832543526089093 27.82070195087185 20.62368027304238 60-61 23.879228106366117 28.73936471608993 27.03210284242073 20.349304335123218 62-63 22.681817980601952 26.554151412799527 29.83941385309364 20.924616753504885 64-65 20.780193803425426 29.148148066171164 29.73532972700189 20.33632840340152 66-67 20.36391263352206 28.583764204356815 27.12996184135388 23.922361320767248 68-69 19.119246875816184 31.324175848498665 26.696582322188235 22.85999495349692 70-71 20.245662884740526 29.41239779724567 28.92404348846166 21.417895829552144 72-73 22.57408177991049 29.628866218973965 27.297514597231505 20.499537403884034 74-75 21.184218389634303 30.641182563889174 26.34601082784784 21.828588218628678 76-77 23.709572640870476 28.203256765191526 27.11037344122816 20.97679715270984 78-79 19.913849773571375 28.811742194520562 29.370592609971713 21.90381542193635 80-81 18.637311364813478 28.579863124670762 29.647569267681572 23.13525624283419 82-83 19.635545088734347 28.12761455340661 30.065399802566635 22.17144055529241 84-85 18.599683929543733 27.63447381351843 28.880744270669634 24.8850979862682 86 19.170071580662153 27.94827555677537 30.046281745381787 22.835371117180685 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 886.0 1 1119.5 2 4757.5 3 5249.5 4 2507.5 5 2951.5 6 3304.0 7 3383.0 8 3550.5 9 3704.5 10 3715.0 11 3830.5 12 4092.5 13 4145.0 14 4027.0 15 4084.0 16 4225.5 17 4347.0 18 4340.5 19 4534.5 20 4827.5 21 4883.0 22 5974.0 23 7005.5 24 8271.5 25 10919.5 26 12353.5 27 14468.5 28 19500.5 29 22529.0 30 24043.5 31 28208.0 32 30876.5 33 33679.0 34 41263.5 35 47353.0 36 48642.0 37 49561.0 38 53034.0 39 60439.0 40 66650.5 41 73083.0 42 80361.0 43 82567.0 44 82296.5 45 84398.5 46 89506.5 47 95171.5 48 95062.5 49 90001.0 50 87978.0 51 77926.0 52 65165.0 53 59380.5 54 55679.5 55 52953.5 56 47428.5 57 44004.0 58 39086.0 59 31744.0 60 25493.0 61 19204.5 62 14773.0 63 11261.5 64 9720.0 65 8344.0 66 6004.0 67 4809.5 68 4237.0 69 3332.0 70 2400.5 71 2032.0 72 1728.5 73 1036.0 74 538.5 75 353.5 76 264.5 77 220.0 78 137.0 79 86.0 80 87.5 81 111.0 82 92.0 83 40.0 84 31.0 85 28.5 86 24.0 87 17.0 88 13.5 89 13.5 90 10.5 91 12.0 92 10.0 93 7.0 94 7.0 95 4.5 96 1.5 97 1.0 98 0.5 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1807192.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.80118934373334 #Duplication Level Percentage of deduplicated Percentage of total 1 80.0196174826429 13.444247445389982 2 7.1396885155062275 2.399105172085971 3 2.2765202831220073 1.1474474496474683 4 1.1653938962723338 0.7832001404521045 5 0.7337764585221288 0.616415860780219 6 0.5299286594712614 0.5342059047868472 7 0.4085947737597411 0.48054147111581097 8 0.3315104953155333 0.445581648098488 9 0.27393974120408454 0.4142262114668822 >10 3.7492658630065976 15.769425622105517 >50 1.738690348837517 21.238705861403858 >100 1.6267630499288321 41.239453554159496 >500 0.005314048346031017 0.5826230206510934 >1k 6.642560432538772E-4 0.13526273365178149 >5k 0.0 0.0 >10k+ 3.321280216269386E-4 0.7695579042045043 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13791 0.7631175879485964 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.1066892726395425E-4 0.0 0.0 0.02019707922567165 0.0 2 1.1066892726395425E-4 0.0 0.0 0.06950008632176327 0.0 3 1.1066892726395425E-4 0.0 0.0 0.1042501294826449 0.0 4 1.1066892726395425E-4 0.0 0.0 0.18000301019482157 0.0 5 1.1066892726395425E-4 0.0 0.0 0.3541959017082856 0.0 6 1.1066892726395425E-4 0.0 0.0 0.4949114427244034 0.0 7 1.1066892726395425E-4 0.0 0.0 0.5910274060531476 0.0 8 1.1066892726395425E-4 0.0 0.0 0.7689277066299541 0.0 9 1.1066892726395425E-4 0.0 0.0 0.8372657692154458 0.0 10 1.1066892726395425E-4 0.0 0.0 0.9897122165215428 0.0 11 1.1066892726395425E-4 0.0 0.0 1.1746953284432424 0.0 12 1.1066892726395425E-4 0.0 0.0 1.342248084320869 0.0 13 1.1066892726395425E-4 0.0 0.0 1.3945391524530875 0.0 14 1.1066892726395425E-4 0.0 0.0 1.4184436407421015 0.0 15 1.1066892726395425E-4 0.0 0.0 1.4569564274299576 0.0 16 1.1066892726395425E-4 0.0 0.0 1.5294445747878476 0.0 17 1.1066892726395425E-4 0.0 0.0 1.6294892850344622 0.0 18 1.1066892726395425E-4 0.0 0.0 1.7424822597709595 0.0 19 1.1066892726395425E-4 0.0 0.0 1.823436580064542 0.0 20 1.1066892726395425E-4 0.0 0.0 1.9166198168207915 0.0 21 1.1066892726395425E-4 0.0 0.0 2.022695983603292 0.0 22 1.1066892726395425E-4 0.0 5.5334463631977125E-5 2.1426057662937863 0.0 23 1.1066892726395425E-4 0.0 5.5334463631977125E-5 2.2560414167393392 0.0 24 1.1066892726395425E-4 0.0 5.5334463631977125E-5 2.3378810884510335 0.0 25 1.6600339089593136E-4 0.0 5.5334463631977125E-5 2.4176180505447125 0.0 26 1.6600339089593136E-4 0.0 5.5334463631977125E-5 2.498517036374663 0.0 27 1.6600339089593136E-4 0.0 5.5334463631977125E-5 2.5917556075945445 0.0 28 1.6600339089593136E-4 0.0 5.5334463631977125E-5 2.684994178814426 0.0 29 1.6600339089593136E-4 0.0 5.5334463631977125E-5 2.8005325388779942 0.0 30 1.6600339089593136E-4 0.0 5.5334463631977125E-5 2.927082457204326 0.0 31 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.0363126884138487 0.0 32 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.1336460099424963 0.0 33 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.2345760716072225 0.0 34 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.3537111718068693 0.0 35 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.475225653942691 0.0 36 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.581689161970615 0.0 37 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.7090137627877944 0.0 38 1.6600339089593136E-4 0.0 5.5334463631977125E-5 3.867104325384353 0.0 39 1.6600339089593136E-4 0.0 5.5334463631977125E-5 4.192747643858539 0.0 40 1.6600339089593136E-4 0.0 5.5334463631977125E-5 4.355154294618392 0.0 41 1.6600339089593136E-4 0.0 5.5334463631977125E-5 4.49979858255238 0.0 42 1.6600339089593136E-4 0.0 5.5334463631977125E-5 4.643280846750097 0.0 43 1.6600339089593136E-4 0.0 5.5334463631977125E-5 4.774589528948778 0.0 44 1.6600339089593136E-4 0.0 5.5334463631977125E-5 4.9010841128114775 0.0 45 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.02010854408386 0.0 46 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.157448682818428 0.0 47 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.315096569705931 0.0 48 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.456808131067424 0.0 49 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.599681716165189 0.0 50 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.748752761189735 0.0 51 1.6600339089593136E-4 0.0 5.5334463631977125E-5 5.9015312152776245 0.0 52 1.6600339089593136E-4 0.0 5.5334463631977125E-5 6.095257172453176 0.0 53 1.6600339089593136E-4 0.0 5.5334463631977125E-5 6.253181731658839 0.0 54 1.6600339089593136E-4 0.0 5.5334463631977125E-5 6.410442277300918 0.0 55 1.6600339089593136E-4 0.0 5.5334463631977125E-5 6.563331400316071 0.0 56 1.6600339089593136E-4 0.0 5.5334463631977125E-5 6.71948525668551 0.0 57 1.6600339089593136E-4 0.0 5.5334463631977125E-5 6.889196056644784 0.0 58 2.213378545279085E-4 0.0 5.5334463631977125E-5 7.0527647311409085 0.0 59 2.213378545279085E-4 0.0 5.5334463631977125E-5 7.216720746882456 0.0 60 2.213378545279085E-4 0.0 5.5334463631977125E-5 7.408731335685417 0.0 61 2.213378545279085E-4 0.0 5.5334463631977125E-5 7.59858388040673 0.0 62 2.766723181598856E-4 0.0 5.5334463631977125E-5 7.836411405096968 0.0 63 2.766723181598856E-4 0.0 5.5334463631977125E-5 8.045133001916787 0.0 64 2.766723181598856E-4 0.0 5.5334463631977125E-5 8.244226402064639 0.0 65 2.766723181598856E-4 0.0 5.5334463631977125E-5 8.43286158858605 0.0 66 2.766723181598856E-4 0.0 5.5334463631977125E-5 8.608991186326632 0.0 67 2.766723181598856E-4 0.0 5.5334463631977125E-5 8.81516739781938 0.0 68 2.766723181598856E-4 0.0 5.5334463631977125E-5 9.054710290882209 0.0 69 3.320067817918627E-4 0.0 5.5334463631977125E-5 9.451790401905276 0.0 70 3.320067817918627E-4 0.0 5.5334463631977125E-5 9.67805302369643 0.0 71 3.320067817918627E-4 0.0 5.5334463631977125E-5 9.886055272489033 0.0 72 3.320067817918627E-4 0.0 5.5334463631977125E-5 10.087030044400374 0.0 73 3.320067817918627E-4 0.0 5.5334463631977125E-5 10.297522344056414 0.0 74 3.320067817918627E-4 0.0 5.5334463631977125E-5 10.525666337611057 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 6470 0.0 73.69397 1 ACGGGAT 1030 0.0 67.18446 5 GGGCGAT 1090 0.0 65.68807 7 TAAGGGA 2825 0.0 65.27434 4 CGAACGG 105 0.0 64.7619 2 TACGGGA 750 0.0 64.53333 4 TAGCGGG 1115 0.0 62.78027 3 TAGGGAC 2205 0.0 62.403625 5 GGCGATA 225 0.0 62.22223 8 ATAGCGG 385 0.0 61.298702 2 CGGGATT 1170 0.0 60.51282 6 AGGGATT 3475 0.0 60.20144 6 GCGGGAT 1560 0.0 60.0 5 GTGCGGG 1080 0.0 59.629627 3 GTAGGGA 3015 0.0 59.43615 4 CGGGATC 630 0.0 59.04762 6 TATGGGA 2605 0.0 58.963528 4 AAGGGAT 3250 0.0 58.953846 5 TTGCGGG 1550 0.0 58.322582 3 TAGGGAG 2485 0.0 58.269615 5 >>END_MODULE