##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547808_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3834861 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.70948725390568 31.0 31.0 33.0 30.0 34.0 2 32.15352551239797 33.0 31.0 34.0 30.0 34.0 3 32.30651671599049 34.0 31.0 34.0 30.0 34.0 4 35.901609732399685 37.0 35.0 37.0 35.0 37.0 5 35.840256270044726 37.0 35.0 37.0 35.0 37.0 6 35.88880509619514 37.0 35.0 37.0 35.0 37.0 7 36.20660331626101 37.0 35.0 37.0 35.0 37.0 8 36.17447829269431 37.0 35.0 37.0 35.0 37.0 9 38.04148520637384 39.0 39.0 39.0 35.0 39.0 10-11 37.419107107141556 39.0 37.0 39.0 34.5 39.0 12-13 36.764643751103364 39.0 35.0 39.0 33.0 39.0 14-15 37.857222986700165 40.0 36.0 41.0 33.0 41.0 16-17 38.021342103403484 40.0 36.0 41.0 33.0 41.0 18-19 37.91797199429132 40.0 36.0 41.0 33.5 41.0 20-21 37.746531099823436 40.0 35.0 41.0 33.0 41.0 22-23 37.550455674925374 39.5 35.0 41.0 33.0 41.0 24-25 37.46533681403315 39.0 35.0 41.0 33.0 41.0 26-27 37.42728093664934 39.0 35.0 41.0 33.0 41.0 28-29 37.38871434975088 39.0 35.0 41.0 33.0 41.0 30-31 37.20940459119639 39.0 35.0 41.0 32.5 41.0 32-33 36.93163467984889 39.0 35.0 41.0 31.5 41.0 34-35 36.695759768085466 39.0 35.0 41.0 31.0 41.0 36-37 36.509466053658784 39.0 35.0 41.0 30.5 41.0 38-39 36.43245700430863 39.0 35.0 41.0 30.0 41.0 40-41 36.28571178981455 39.0 35.0 41.0 30.0 41.0 42-43 36.227802520091345 39.0 35.0 41.0 30.0 41.0 44-45 36.119226485653584 38.0 35.0 41.0 30.0 41.0 46-47 36.021630119057775 38.0 35.0 41.0 30.0 41.0 48-49 35.912425509034094 38.0 35.0 40.0 29.5 41.0 50-51 35.74129270917512 38.0 35.0 40.0 29.0 41.0 52-53 35.55664286137099 37.5 35.0 40.0 29.0 41.0 54-55 35.34068418646726 37.0 34.5 40.0 28.0 41.0 56-57 35.028721119227 36.5 34.0 40.0 27.5 41.0 58-59 34.6979093896754 36.0 34.0 40.0 26.0 41.0 60-61 34.362754608315655 36.0 34.0 39.0 26.0 41.0 62-63 33.959950178115974 35.0 33.5 39.0 25.5 40.5 64-65 33.6165894930742 35.0 33.0 38.5 25.0 40.0 66-67 33.28338106648455 35.0 33.0 38.0 23.5 40.0 68-69 32.79122594013186 35.0 32.5 37.0 22.0 40.0 70-71 32.48087831605891 35.0 32.0 36.5 21.5 39.0 72-73 32.20434977956177 35.0 32.0 36.0 20.0 39.0 74-75 31.894016367216437 35.0 32.0 36.0 20.0 38.5 76-77 29.853963546527503 33.0 29.0 34.5 17.0 36.0 78-79 30.956324231830045 34.0 30.5 35.0 18.0 37.0 80-81 31.13227937075164 34.5 31.0 35.0 18.0 36.5 82-83 30.945581730341726 34.5 31.0 35.0 17.5 36.0 84-85 30.71161288505633 34.0 31.0 35.0 16.0 36.0 86 30.289466032797538 34.0 30.0 35.0 12.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 14.0 10 22.0 11 42.0 12 98.0 13 194.0 14 623.0 15 1847.0 16 4558.0 17 9381.0 18 16812.0 19 23743.0 20 27759.0 21 28406.0 22 27370.0 23 27739.0 24 30577.0 25 36063.0 26 43716.0 27 52793.0 28 64031.0 29 79854.0 30 97919.0 31 119018.0 32 142917.0 33 179433.0 34 384437.0 35 370130.0 36 342655.0 37 566015.0 38 774472.0 39 380809.0 40 1411.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.40811648714256 24.4793748717359 31.405675459944966 13.706833181176581 2 29.62177768633596 26.163269020702444 31.381398178447668 12.833555114513928 3 27.92938257736069 25.312208186946016 32.96450640583844 13.79390282985485 4 26.986793002406085 27.051697571307017 31.670300435921927 14.29120899036497 5 24.52599976896164 31.46922404749481 30.441494489630784 13.563281693912765 6 23.053117179475343 39.88832972042533 26.362415743360714 10.696137356738616 7 89.30662675909244 3.207078431265175 6.00525025548514 1.4810445541572432 8 89.792563537505 2.775015834993759 5.773220985063083 1.6591996424381483 9 85.2508343848708 5.691236266451378 6.869349371463529 2.1885799772142978 10-11 37.2589514978509 30.25848916036331 20.815917447855345 11.666641893930445 12-13 28.08825404623531 25.78398539086554 28.659604611483964 17.468155951415188 14-15 15.381717877127748 32.3402073764864 34.31506383151827 17.96301091486758 16-17 21.829461354661877 29.343332131203713 30.492682785634212 18.334523728500198 18-19 22.7550229330346 30.415118044695756 29.319967529461955 17.509891492807693 20-21 24.827627389884537 30.468392465854695 29.77693324477732 14.927046899483448 22-23 20.812579647606526 25.881850737223594 32.019309174439435 21.286260440730445 24-25 18.737589185109968 29.6789114390326 33.63884636235838 17.944653013499053 26-27 18.098283092920447 35.28018355815243 28.60383987842063 18.017693470506494 28-29 16.640016417804972 30.046408461740853 34.3248164666203 18.988758653833866 30-31 21.528016269690088 30.571016785223765 29.870026579842136 18.030940365244007 32-33 24.00656764352085 29.681401750937 28.723765998298244 17.588264607243914 34-35 19.233956589300107 29.735367201053702 30.619088931776144 20.411587277870044 36-37 21.58075612127793 30.657056409606504 29.409762179124616 18.352425289990954 38-39 18.866655140825184 32.23084226520857 28.59125793607643 20.311244657889816 40-41 20.064182248065837 28.927137124396424 28.84500898468028 22.16367164285746 42-43 20.01712708752677 28.13485286689661 29.10271063279738 22.74530941277924 44-45 19.153080124677267 32.13591053235045 28.33968428060365 20.371325062368623 46-47 20.264802296615184 30.59721069420769 28.82015801876522 20.317828990411908 48-49 19.87872572174063 28.923864515558712 31.411347112711518 19.786062649989137 50-51 18.669164280009106 31.667914430275307 28.965782592902322 20.697138696813262 52-53 20.55984558501599 28.637022306675526 30.67815235024164 20.12497975806685 54-55 20.75663237859208 28.773259317612816 30.447087912704006 20.023020391091098 56-57 21.103281188027413 27.63822469706203 29.696460966903366 21.56203314800719 58-59 22.0883625247434 29.29528606121578 28.85326221732678 19.76308919671404 60-61 22.303976597848006 30.376733341834296 27.459952264241128 19.859337796076574 62-63 20.91178793703344 28.61661739499815 30.776487074759686 19.695107593208725 64-65 19.50155429362368 31.812443788705767 29.708351880289797 18.977650037380755 66-67 18.269984231501482 30.67352376005284 26.731699010733372 24.3247929977123 68-69 17.69330100882405 32.87416414832246 26.83474055513355 22.597794287719946 70-71 18.968823120316486 31.076928212000382 29.530913897531097 20.423334770152035 72-73 20.93915529141734 31.26789993170548 27.921820373671952 19.871124403205226 74-75 19.797679759448908 32.302957004178246 26.757645192355085 21.14171804401776 76-77 22.808584196402425 30.01777639398143 27.19085515746203 19.982784252154122 78-79 18.222916032680196 30.623261182087173 30.18969918336023 20.9641236018724 80-81 17.01284609794201 29.684335364436937 30.904653389001584 22.398165148619466 82-83 18.309255537554034 29.116883245572655 30.257511289196664 22.316349927676647 84-85 17.408336312580822 29.148475003396474 29.155711250029665 24.287477433993043 86 17.97809620739839 28.96136261522908 30.493282546616424 22.56725863075611 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2891.0 1 3642.5 2 11053.5 3 11201.5 4 5261.5 5 7523.5 6 11060.5 7 12907.0 8 14018.5 9 15529.5 10 15260.0 11 13941.0 12 12529.5 13 11421.0 14 11074.0 15 10721.0 16 10224.5 17 9939.5 18 9741.5 19 10478.5 20 11755.0 21 12238.0 22 12950.5 23 15698.5 24 19268.0 25 24223.5 26 31050.5 27 36709.0 28 44518.5 29 50075.0 30 57574.0 31 72257.0 32 81686.5 33 86172.0 34 93863.0 35 112490.0 36 125666.0 37 126554.5 38 133082.5 39 142863.5 40 157170.5 41 175240.0 42 186539.5 43 189935.0 44 193271.0 45 198412.0 46 199849.0 47 203389.5 48 197579.0 49 175708.5 50 163557.0 51 148717.5 52 127679.0 53 111862.0 54 94557.5 55 82813.0 56 73216.0 57 67677.0 58 60863.0 59 45925.5 60 32285.5 61 23492.0 62 18526.5 63 13692.0 64 10546.0 65 8241.5 66 5288.5 67 4115.0 68 2787.0 69 1854.0 70 1387.0 71 1050.0 72 830.5 73 568.5 74 422.0 75 241.0 76 146.0 77 132.0 78 102.0 79 68.0 80 68.5 81 56.0 82 40.5 83 29.5 84 19.5 85 15.0 86 12.0 87 9.0 88 4.5 89 2.5 90 1.0 91 0.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3834861.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.406586467933774 #Duplication Level Percentage of deduplicated Percentage of total 1 76.53150312031343 11.790892203440524 2 10.340580841966403 3.186261057408297 3 3.5127743171767327 1.6235958377976107 4 1.6547115883367123 1.019738286608064 5 0.9889902428738641 0.7618481846389507 6 0.6724811201344131 0.6216383115242278 7 0.5150237076246853 0.5554330099188889 8 0.41915323965377294 0.5166176504032336 9 0.3413367348806958 0.4732950528559465 >10 2.7453406350498955 8.687103523937076 >50 0.6597276974869604 7.4384843326922985 >100 1.5604920345283684 56.752535515097904 >500 0.05360330577491453 4.779235543596734 >1k 0.0041101576313033504 1.1362874189588867 >5k 0.0 0.0 >10k+ 1.7125656797097294E-4 0.6570340711213997 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 24902 0.649358607782655 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 4022 0.10487994219347194 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGGTTACACTCGTATGC 4019 0.10480171250014017 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.07165839909190971 0.0 2 0.0 0.0 0.0 0.2334895580309169 0.0 3 0.0 0.0 0.0 0.335109929668898 0.0 4 0.0 0.0 0.0 0.48705807068365714 0.0 5 0.0 0.0 0.0 0.838518006258897 0.0 6 0.0 0.0 0.0 1.0927645095871794 0.0 7 0.0 0.0 0.0 1.3013770251385903 0.0 8 0.0 0.0 0.0 1.71453411218816 0.0 9 0.0 0.0 0.0 1.858059522887531 0.0 10 0.0 0.0 0.0 2.117051960944608 0.0 11 0.0 0.0 0.0 2.601945676779419 0.0 12 0.0 0.0 0.0 2.921566127168625 0.0 13 0.0 0.0 0.0 3.0357814794330227 0.0 14 0.0 0.0 0.0 3.081676232854333 0.0 15 0.0 0.0 0.0 3.1533085553817988 0.0 16 0.0 0.0 0.0 3.3046308588499036 0.0 17 0.0 0.0 0.0 3.507011075499216 0.0 18 0.0 0.0 0.0 3.7258456043126467 0.0 19 0.0 0.0 0.0 3.893257148042654 0.0 20 0.0 0.0 0.0 4.064997401470353 0.0 21 0.0 0.0 0.0 4.274757285857297 0.0 22 0.0 0.0 0.0 4.515365745981406 0.0 23 0.0 0.0 0.0 4.749298605607869 0.0 24 0.0 0.0 0.0 4.923933357688845 0.0 25 0.0 0.0 0.0 5.084773607178983 0.0 26 0.0 0.0 0.0 5.239225098380358 0.0 27 0.0 0.0 0.0 5.395449795963922 0.0 28 0.0 0.0 0.0 5.567294355649397 0.0 29 0.0 0.0 0.0 5.7710044770853495 0.0 30 0.0 0.0 0.0 6.007466763462874 0.0 31 0.0 0.0 0.0 6.213941000729883 0.0 32 0.0 0.0 0.0 6.400936044357279 0.0 33 0.0 0.0 0.0 6.585193048718063 0.0 34 0.0 0.0 0.0 6.78321847910524 0.0 35 0.0 0.0 0.0 7.008076694305218 0.0 36 0.0 0.0 0.0 7.213951170590017 0.0 37 0.0 0.0 0.0 7.427570386514661 0.0 38 0.0 0.0 0.0 7.667735545043223 0.0 39 2.607656444392639E-5 0.0 0.0 8.009990453369758 0.0 40 2.607656444392639E-5 0.0 0.0 8.249842693124991 0.0 41 2.607656444392639E-5 0.0 0.0 8.48646143888918 0.0 42 2.607656444392639E-5 0.0 0.0 8.743654593999626 0.0 43 2.607656444392639E-5 0.0 0.0 8.976674773870553 0.0 44 2.607656444392639E-5 0.0 0.0 9.211442083559222 0.0 45 2.607656444392639E-5 0.0 0.0 9.443836425883493 0.0 46 2.607656444392639E-5 0.0 0.0 9.690416419265262 0.0 47 2.607656444392639E-5 0.0 0.0 9.946201439895736 0.0 48 2.607656444392639E-5 0.0 0.0 10.196979760152976 0.0 49 2.607656444392639E-5 0.0 0.0 10.457849710850015 0.0 50 2.607656444392639E-5 0.0 0.0 10.731705790640131 0.0 51 2.607656444392639E-5 0.0 0.0 11.000085791897021 0.0 52 2.607656444392639E-5 0.0 0.0 11.309953607184198 0.0 53 5.215312888785278E-5 0.0 0.0 11.587408252867574 0.0 54 5.215312888785278E-5 0.0 0.0 11.872816250706348 0.0 55 5.215312888785278E-5 0.0 0.0 12.162213962905044 0.0 56 5.215312888785278E-5 0.0 0.0 12.447491577921598 0.0 57 5.215312888785278E-5 0.0 0.0 12.730969909991522 0.0 58 5.215312888785278E-5 0.0 0.0 13.008502785368231 0.0 59 5.215312888785278E-5 0.0 0.0 13.308435429602273 0.0 60 5.215312888785278E-5 0.0 0.0 13.636947988466858 0.0 61 5.215312888785278E-5 0.0 0.0 13.946242119336269 0.0 62 7.822969333177917E-5 0.0 0.0 14.298719040924821 0.0 63 7.822969333177917E-5 0.0 0.0 14.625693082487214 0.0 64 7.822969333177917E-5 0.0 0.0 14.971833398915892 0.0 65 7.822969333177917E-5 0.0 0.0 15.282014132976398 0.0 66 7.822969333177917E-5 0.0 0.0 15.585884338441472 0.0 67 7.822969333177917E-5 0.0 0.0 15.90399234809293 0.0 68 7.822969333177917E-5 0.0 0.0 16.276469994609975 0.0 69 1.0430625777570557E-4 0.0 0.0 16.784989077830982 0.0 70 1.0430625777570557E-4 0.0 0.0 17.130451403584118 0.0 71 1.0430625777570557E-4 0.0 0.0 17.463814203435273 0.0 72 1.3038282221963194E-4 0.0 0.0 17.798193989299744 0.0 73 1.3038282221963194E-4 0.0 0.0 18.126211093439892 0.0 74 1.3038282221963194E-4 0.0 0.0 18.513135156658873 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGA 1995 0.0 74.18547 4 GCTAGCG 180 0.0 71.11111 1 CGTTTTT 10920 0.0 70.366295 1 ACGGGAT 2310 0.0 68.91775 5 GTCGACG 70 0.0 68.57143 1 CGTTAGG 700 0.0 68.0 2 TTACGGG 1625 0.0 67.69231 3 GCGCGAC 160 0.0 67.5 9 TTAGGGA 6195 0.0 65.92413 4 ATAGGGA 5780 0.0 65.74394 4 TAGGGAC 4515 0.0 64.58472 5 TAGGGAT 6740 0.0 64.51038 5 TAGCGGG 2620 0.0 64.27481 3 ACGGGAC 1495 0.0 64.21405 5 GTAGCGG 900 0.0 64.0 2 GCGTAAG 245 0.0 63.67347 1 GGCGATA 600 0.0 63.333332 8 CGGGACT 1615 0.0 62.910217 6 AGGGATT 7775 0.0 62.30225 6 TAGTTCG 135 0.0 62.22222 1 >>END_MODULE