##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547807_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2658371 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7570316558524 31.0 31.0 33.0 30.0 34.0 2 32.20465239802872 33.0 31.0 34.0 30.0 34.0 3 32.35778076122558 34.0 31.0 34.0 30.0 34.0 4 35.94068660845307 37.0 35.0 37.0 35.0 37.0 5 35.88770228083288 37.0 35.0 37.0 35.0 37.0 6 35.94449081787305 37.0 35.0 37.0 35.0 37.0 7 36.24112661475768 37.0 35.0 37.0 35.0 37.0 8 36.20741235892206 37.0 36.0 37.0 35.0 37.0 9 38.09497696145497 39.0 39.0 39.0 37.0 39.0 10-11 37.497282922511566 39.0 37.5 39.0 34.5 39.0 12-13 36.86169838596645 39.0 35.0 39.0 33.0 39.0 14-15 37.95864629128139 40.0 36.0 41.0 33.0 41.0 16-17 38.09786199894597 40.0 36.0 41.0 33.5 41.0 18-19 37.990329416022064 40.0 36.0 41.0 33.5 41.0 20-21 37.82842406120139 40.0 35.0 41.0 33.5 41.0 22-23 37.63273880884195 39.5 35.0 41.0 33.0 41.0 24-25 37.564490810349646 39.0 35.0 41.0 33.0 41.0 26-27 37.526158312741146 39.5 35.0 41.0 33.0 41.0 28-29 37.50718278223769 40.0 35.0 41.0 33.0 41.0 30-31 37.34923078832864 39.5 35.0 41.0 33.0 41.0 32-33 37.06780167252803 39.0 35.0 41.0 32.0 41.0 34-35 36.80432565657691 39.0 35.0 41.0 31.0 41.0 36-37 36.64163090855264 39.0 35.0 41.0 31.0 41.0 38-39 36.566695167830225 39.0 35.0 41.0 31.0 41.0 40-41 36.412521615681186 39.0 35.0 41.0 30.0 41.0 42-43 36.37767696833888 39.0 35.0 41.0 30.0 41.0 44-45 36.267280037285985 39.0 35.0 41.0 30.0 41.0 46-47 36.18242092619879 38.0 35.0 41.0 30.0 41.0 48-49 36.080154162078955 38.0 35.0 40.5 30.0 41.0 50-51 35.90517971344105 38.0 35.0 40.0 29.5 41.0 52-53 35.713187136031806 38.0 35.0 40.0 29.0 41.0 54-55 35.52448153399206 37.5 35.0 40.0 29.0 41.0 56-57 35.23323531591339 37.0 34.5 40.0 28.0 41.0 58-59 34.91476584720492 36.5 34.0 40.0 27.0 41.0 60-61 34.59752194106842 36.0 34.0 39.5 26.5 41.0 62-63 34.22095091317202 35.5 33.5 39.0 26.0 41.0 64-65 33.90393459001773 35.0 33.0 39.0 26.0 40.0 66-67 33.58924770094167 35.0 33.0 38.0 25.0 40.0 68-69 33.13424743950337 35.0 33.0 37.5 24.0 40.0 70-71 32.860952064252885 35.0 33.0 37.0 24.0 39.0 72-73 32.58355022681184 35.0 33.0 36.5 23.0 39.0 74-75 32.28972291677873 35.0 32.5 36.0 22.5 38.5 76-77 30.224890543870664 33.0 29.5 34.5 19.0 36.0 78-79 31.33552314556546 34.0 31.0 35.0 20.0 37.0 80-81 31.510771069952234 35.0 32.0 35.0 20.0 37.0 82-83 31.328999789720847 35.0 32.0 35.0 19.0 36.0 84-85 31.107905743780684 34.5 32.0 35.0 18.5 36.0 86 30.67915087848912 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 10.0 10 15.0 11 25.0 12 36.0 13 101.0 14 324.0 15 1067.0 16 2645.0 17 5826.0 18 11179.0 19 16399.0 20 19255.0 21 19759.0 22 17977.0 23 17467.0 24 18941.0 25 22167.0 26 26612.0 27 32225.0 28 40257.0 29 49504.0 30 62334.0 31 75402.0 32 93078.0 33 119545.0 34 266115.0 35 259941.0 36 234405.0 37 399455.0 38 562719.0 39 282501.0 40 1081.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.575416298176588 24.67285416520117 31.389937672356496 13.361791864265749 2 29.3225813853672 25.887771119982876 32.10499964075744 12.684647853892479 3 28.9801160184188 25.212846513898924 32.225938366014375 13.5810991016679 4 26.527749512765524 27.678454211244407 31.881027892645537 13.912768383344536 5 23.795775683679967 32.218941599949744 30.014659353416057 13.97062336295423 6 21.991437613485854 40.694846580857224 26.933637178557845 10.380078627099076 7 89.35874639017653 3.371952221868204 5.759429364825301 1.5098720231299543 8 90.11360716769781 2.602082252627643 5.730351406933043 1.5539591727415023 9 86.13429051099338 5.2668344636621445 6.484422226995404 2.114452798349064 10-11 36.82627443648761 31.183025243654853 19.88956770894657 12.101132610910968 12-13 28.23966256026717 26.074539633482306 28.59252903375789 17.093268772492628 14-15 15.826045348824525 32.25210100471303 34.63634308379079 17.285510562671654 16-17 21.75127173746629 28.236408687876903 31.603433079882382 18.408886494774432 18-19 22.814178306940605 29.813916116298287 29.86720062775286 17.504704949008246 20-21 25.538910859319486 28.79560452623054 29.886573394007083 15.778911220442895 22-23 21.174696835016633 25.613618264719257 32.52435420037308 20.687330699891024 24-25 19.629182683681094 28.61822145968339 33.87975192326429 17.872843933371225 26-27 18.139586235329833 34.92796904570506 29.15114180827281 17.7813029106923 28-29 16.276866547220084 30.25636752733159 34.784083937117884 18.682681988330447 30-31 21.14501700477473 29.984340033802653 31.06552847589746 17.80511448552516 32-33 24.11087466723042 29.477657557955606 29.019801976473563 17.391665798340412 34-35 18.85049152281604 29.756117562221373 31.080123880376366 20.313267034586218 36-37 21.586133011532247 30.38906157191754 29.999349225521943 18.025456191028265 38-39 19.698924642196292 31.68993342163302 28.78328495157373 19.82785698459696 40-41 19.646975535017496 28.60227184241778 29.98537450190361 21.76537812066111 42-43 19.870533495889024 28.22175685786521 29.50551296263765 22.402196683608118 44-45 19.411549403751398 31.82385001942919 28.627287161949933 20.13731341486948 46-47 20.057885073227176 31.157803030502514 28.982184954620706 19.802126941649604 48-49 20.86057589403435 28.88590418718832 30.717044385452596 19.536475533324733 50-51 18.900390502303853 31.053886007633995 29.570834921085133 20.47488856897702 52-53 20.79517870154316 28.467132691411397 30.370553997165935 20.367134609879507 54-55 20.70583827464263 28.057502131944712 31.137414604658264 20.099244988754393 56-57 21.346079986578246 27.793505872581363 29.803082414004667 21.05733172683572 58-59 21.790731993389937 29.291547342338596 29.081249381670204 19.836471282601263 60-61 22.40798970497346 30.515962595138152 27.80787557492916 19.268172124959232 62-63 21.418925349396304 28.679066992530387 30.105786588854606 19.796221069218706 64-65 19.42608838269752 30.466552636934424 30.508363956723873 19.59899502364418 66-67 18.68382930749696 30.933210601530035 26.834497517464644 23.548462573508363 68-69 17.90519457216468 33.10882867741184 27.077823223319847 21.90815352710363 70-71 18.62458249807871 31.262773329982913 29.259140278012364 20.853503893926018 72-73 21.472924584266078 30.884853919938188 27.74614604206862 19.896075453727114 74-75 19.96643809310288 32.83097054549572 26.002954440896325 21.19963692050508 76-77 22.781733625592516 30.315162932487606 26.957862540631083 19.9452409012888 78-79 18.60641347652378 30.706379959757307 29.37024215205477 21.316964411664134 80-81 16.999226217860485 29.958120969571215 30.222098420423638 22.82055439214466 82-83 18.745107436095264 29.519675771365243 30.423424721380123 21.31179207115937 84-85 17.182740858969648 28.53333864987242 29.96062250152443 24.323297989633502 86 17.811208443065322 29.280676023023123 30.012477566148593 22.895637967762962 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1903.0 1 2303.0 2 6619.0 3 6742.5 4 3380.0 5 4992.0 6 7174.5 7 8175.0 8 8728.5 9 9493.0 10 9434.5 11 8513.5 12 7537.5 13 7127.5 14 7042.0 15 6907.0 16 6888.0 17 7059.0 18 7260.5 19 7884.5 20 9274.0 21 10186.0 22 10593.0 23 10954.0 24 12635.0 25 16109.0 26 20173.0 27 25564.5 28 34212.5 29 39786.0 30 44523.5 31 51877.0 32 58455.5 33 66369.0 34 70831.0 35 75762.0 36 80182.0 37 83436.5 38 89596.0 39 98070.0 40 110204.5 41 122026.0 42 132658.0 43 138034.0 44 141336.5 45 140647.5 46 138889.0 47 141816.0 48 135592.0 49 121745.5 50 114817.0 51 98642.5 52 78778.5 53 70130.0 54 63442.0 55 58262.0 56 52005.0 57 49199.0 58 43641.0 59 31288.0 60 21631.0 61 16921.0 62 13700.0 63 10515.0 64 8703.0 65 6546.5 66 3527.0 67 2306.0 68 1707.0 69 1153.5 70 627.0 71 413.0 72 342.5 73 255.5 74 186.0 75 130.0 76 97.0 77 50.5 78 39.0 79 44.0 80 31.0 81 15.0 82 10.0 83 10.0 84 11.0 85 6.5 86 3.0 87 4.0 88 4.5 89 4.0 90 2.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2658371.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.908950417712644 #Duplication Level Percentage of deduplicated Percentage of total 1 78.39722846728776 12.472176205721713 2 9.278852811097734 2.9523361861001485 3 3.068899842350629 1.4646892628664692 4 1.449396558602462 0.9223351194563963 5 0.8598434807143103 0.683960365083871 6 0.6207482948945688 0.5925272307214419 7 0.45790851661175735 0.5099390720637357 8 0.3473169532412964 0.44203585506774445 9 0.2916107904210328 0.4175299445470384 >10 2.588349640846709 8.904530836184927 >50 0.879009185384114 10.249587958685094 >100 1.7453477312584855 57.667561376249395 >500 0.011437090921227185 1.1539554594450077 >1k 0.003812363640409062 0.9791677114816368 >5k 0.0 0.0 >10k+ 2.382727275255664E-4 0.5876674163253385 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15503 0.5831766897848344 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3459 0.13011727858903066 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.76170218528565E-5 0.0 0.0 0.05473276679590622 0.0 2 3.76170218528565E-5 0.0 0.0 0.18488766240678972 0.0 3 3.76170218528565E-5 0.0 0.0 0.2657642593904312 0.0 4 3.76170218528565E-5 0.0 0.0 0.3918565166412062 0.0 5 3.76170218528565E-5 0.0 0.0 0.6758650316302728 0.0 6 3.76170218528565E-5 0.0 0.0 0.8867460561373864 0.0 7 3.76170218528565E-5 0.0 0.0 1.0363113350243438 0.0 8 3.76170218528565E-5 0.0 0.0 1.3369465736723731 0.0 9 3.76170218528565E-5 0.0 0.0 1.4379482773472927 0.0 10 3.76170218528565E-5 0.0 0.0 1.6139207055749556 0.0 11 3.76170218528565E-5 0.0 0.0 1.9663922003362209 0.0 12 3.76170218528565E-5 0.0 0.0 2.207743012544148 0.0 13 3.76170218528565E-5 0.0 0.0 2.2920803755382524 0.0 14 3.76170218528565E-5 0.0 0.0 2.3277789292766133 0.0 15 3.76170218528565E-5 0.0 0.0 2.384806334405544 0.0 16 3.76170218528565E-5 0.0 0.0 2.507701144798826 0.0 17 3.76170218528565E-5 0.0 0.0 2.682018424064963 0.0 18 3.76170218528565E-5 0.0 0.0 2.8659656609254314 0.0 19 3.76170218528565E-5 0.0 0.0 3.000032726809012 0.0 20 3.76170218528565E-5 0.0 0.0 3.1385762182930823 0.0 21 3.76170218528565E-5 0.0 0.0 3.3139091571492467 0.0 22 3.76170218528565E-5 0.0 0.0 3.515197841083882 0.0 23 3.76170218528565E-5 0.0 0.0 3.7187435463296885 0.0 24 3.76170218528565E-5 0.0 0.0 3.864321420900243 0.0 25 3.76170218528565E-5 0.0 0.0 3.9929340186151596 0.0 26 3.76170218528565E-5 0.0 0.0 4.11883819075667 0.0 27 3.76170218528565E-5 0.0 0.0 4.259864405683029 0.0 28 3.76170218528565E-5 0.0 0.0 4.401229173806064 0.0 29 3.76170218528565E-5 0.0 0.0 4.5760354743562885 0.0 30 3.76170218528565E-5 0.0 0.0 4.772433945450052 0.0 31 3.76170218528565E-5 0.0 0.0 4.946939309825453 0.0 32 3.76170218528565E-5 0.0 0.0 5.108504418683472 0.0 33 7.5234043705713E-5 0.0 0.0 5.268451995601818 0.0 34 7.5234043705713E-5 0.0 0.0 5.441377445059399 0.0 35 7.5234043705713E-5 0.0 0.0 5.64353132049665 0.0 36 7.5234043705713E-5 0.0 0.0 5.829359408449761 0.0 37 7.5234043705713E-5 0.0 0.0 6.0189115815663055 0.0 38 7.5234043705713E-5 0.0 0.0 6.221178308069114 0.0 39 7.5234043705713E-5 0.0 0.0 6.496121120791643 0.0 40 7.5234043705713E-5 0.0 0.0 6.7217856348869285 0.0 41 7.5234043705713E-5 0.0 0.0 6.943048957425431 0.0 42 7.5234043705713E-5 0.0 0.0 7.175183599279408 0.0 43 7.5234043705713E-5 0.0 0.0 7.382867176929029 0.0 44 7.5234043705713E-5 0.0 0.0 7.5956290525287855 0.0 45 7.5234043705713E-5 0.0 0.0 7.801958417391703 0.0 46 7.5234043705713E-5 0.0 0.0 8.025629229328787 0.0 47 7.5234043705713E-5 0.0 0.0 8.293989063227066 0.0 48 7.5234043705713E-5 0.0 0.0 8.537596896746166 0.0 49 7.5234043705713E-5 0.0 0.0 8.781881836658615 0.0 50 7.5234043705713E-5 0.0 0.0 9.038505159738802 0.0 51 7.5234043705713E-5 0.0 0.0 9.299642525441332 0.0 52 7.5234043705713E-5 0.0 0.0 9.608666359962548 0.0 53 7.5234043705713E-5 0.0 0.0 9.873941598068892 0.0 54 7.5234043705713E-5 0.0 0.0 10.145799814999487 0.0 55 7.5234043705713E-5 0.0 0.0 10.419049861738635 0.0 56 7.5234043705713E-5 0.0 0.0 10.684626036019804 0.0 57 7.5234043705713E-5 0.0 0.0 10.967882210571812 0.0 58 7.5234043705713E-5 0.0 0.0 11.230599491192162 0.0 59 7.5234043705713E-5 0.0 0.0 11.512087665717088 0.0 60 7.5234043705713E-5 0.0 0.0 11.817725968271546 0.0 61 7.5234043705713E-5 0.0 0.0 12.127163590033144 0.0 62 1.50468087411426E-4 0.0 0.0 12.479710318838116 0.0 63 1.8808510926428252E-4 0.0 0.0 12.827404451824068 0.0 64 1.8808510926428252E-4 0.0 0.0 13.161293137790022 0.0 65 1.8808510926428252E-4 0.0 0.0 13.485965653402028 0.0 66 1.8808510926428252E-4 0.0 0.0 13.78663850907191 0.0 67 1.8808510926428252E-4 0.0 0.0 14.103712386269637 0.0 68 3.00936174822852E-4 0.0 0.0 14.442265582945344 0.0 69 3.00936174822852E-4 0.0 0.0 14.865381844746276 0.0 70 3.00936174822852E-4 0.0 0.0 15.214806360737459 0.0 71 3.00936174822852E-4 0.0 0.0 15.549108833943794 0.0 72 3.3855319667570855E-4 0.0 0.0 15.880401945401902 0.0 73 3.3855319667570855E-4 0.0 0.0 16.211544588772597 0.0 74 3.3855319667570855E-4 0.0 0.0 16.590084679677894 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CTACGCG 15 0.0013099812 80.0 2 CGTAAGG 405 0.0 78.02469 2 TCGCGCG 70 0.0 74.28571 1 TACGGGA 1480 0.0 72.97297 4 CTATGCG 90 0.0 71.11111 1 CGTTTTT 7490 0.0 69.63952 1 ATACGCG 75 0.0 69.333336 1 AGTTGCG 185 0.0 69.189186 1 GTACGGG 1215 0.0 68.80659 3 GCGTAAG 250 0.0 68.8 1 ATAGGGA 4300 0.0 67.25581 4 TCGCGAT 60 0.0 66.666664 1 CGGGAGT 675 0.0 66.37038 6 AGGGATT 5895 0.0 65.75063 6 CTATACG 110 0.0 65.454544 1 TAAGGGA 4645 0.0 65.01614 4 ACGGGAC 1170 0.0 64.95726 5 CGGGATA 710 0.0 64.22535 6 GGGCGAT 1890 0.0 64.12698 7 TAGGGAC 3095 0.0 64.10339 5 >>END_MODULE