##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547806_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3593409 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.745116684463138 31.0 31.0 33.0 30.0 34.0 2 32.181557123055015 33.0 31.0 34.0 30.0 34.0 3 32.33602325813733 34.0 31.0 34.0 30.0 34.0 4 35.92244773695396 37.0 35.0 37.0 35.0 37.0 5 35.85882792635071 37.0 35.0 37.0 35.0 37.0 6 35.91985855214366 37.0 35.0 37.0 35.0 37.0 7 36.23119578094227 37.0 35.0 37.0 35.0 37.0 8 36.20117609768329 37.0 36.0 37.0 35.0 37.0 9 38.07909258311536 39.0 39.0 39.0 37.0 39.0 10-11 37.47008147416562 39.0 37.0 39.0 34.5 39.0 12-13 36.811036678541186 39.0 35.0 39.0 33.0 39.0 14-15 37.860468568982824 40.0 36.0 41.0 33.0 41.0 16-17 38.04997413319775 40.0 36.0 41.0 33.0 41.0 18-19 37.96681897329249 40.0 36.0 41.0 33.5 41.0 20-21 37.78527993891038 40.0 35.0 41.0 33.0 41.0 22-23 37.62940525278364 39.5 35.0 41.0 33.0 41.0 24-25 37.56371289769687 39.0 35.0 41.0 33.0 41.0 26-27 37.5234797931435 39.5 35.0 41.0 33.0 41.0 28-29 37.49050873418528 39.0 35.0 41.0 33.0 41.0 30-31 37.31190256939858 39.0 35.0 41.0 32.5 41.0 32-33 37.05256735317354 39.0 35.0 41.0 32.0 41.0 34-35 36.80633905018883 39.0 35.0 41.0 31.0 41.0 36-37 36.64377322481243 39.0 35.0 41.0 31.0 41.0 38-39 36.54433923330186 39.0 35.0 41.0 31.0 41.0 40-41 36.391841563262076 39.0 35.0 41.0 30.0 41.0 42-43 36.360562351794634 39.0 35.0 41.0 30.0 41.0 44-45 36.27164956730503 39.0 35.0 41.0 30.0 41.0 46-47 36.21418101863718 38.0 35.0 41.0 30.0 41.0 48-49 36.10627415359621 38.0 35.0 40.5 30.0 41.0 50-51 35.93978795622763 38.0 35.0 40.0 29.5 41.0 52-53 35.75631176412148 38.0 35.0 40.0 29.0 41.0 54-55 35.552862476829105 37.5 35.0 40.0 28.5 41.0 56-57 35.25582587453863 37.0 34.0 40.0 28.0 41.0 58-59 34.944314577049255 36.5 34.0 40.0 27.0 41.0 60-61 34.62935432621224 36.0 34.0 39.5 26.5 41.0 62-63 34.2350724618322 35.5 33.5 39.0 26.0 41.0 64-65 33.84133896252834 35.0 33.0 39.0 25.0 40.0 66-67 33.49138812197554 35.0 33.0 38.5 24.5 40.0 68-69 32.96636675646997 35.0 33.0 37.5 22.5 40.0 70-71 32.622756552343475 35.0 32.5 37.0 21.0 39.0 72-73 32.27683892927301 35.0 32.0 36.5 20.0 39.0 74-75 31.90373138710344 35.0 32.0 36.0 19.5 38.5 76-77 29.85805039170325 33.0 29.0 34.5 16.0 36.0 78-79 30.932286861862927 34.0 30.5 35.0 17.0 37.0 80-81 31.03603875873857 35.0 31.0 35.0 16.0 37.0 82-83 30.812486972676922 34.5 31.0 35.0 13.5 36.0 84-85 30.53609079845907 34.0 31.0 35.0 11.5 36.0 86 30.07854741834286 34.0 30.0 35.0 10.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 17.0 10 18.0 11 19.0 12 44.0 13 176.0 14 427.0 15 1365.0 16 3400.0 17 7590.0 18 14396.0 19 21026.0 20 24738.0 21 25981.0 22 24592.0 23 24259.0 24 26813.0 25 31571.0 26 38140.0 27 47561.0 28 59139.0 29 74715.0 30 94128.0 31 113194.0 32 136793.0 33 172713.0 34 358594.0 35 340797.0 36 310095.0 37 507042.0 38 741591.0 39 391222.0 40 1249.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.01213916924013 24.106746546246196 31.720435942582657 13.160678341931018 2 29.527337411355063 25.78799129183458 31.445070683576514 13.23960061323384 3 28.50908427067445 24.58487191410719 33.1596820734851 13.746361741733267 4 25.99826515712517 27.06229655460873 32.60447113033891 14.334967157927196 5 24.108666728446444 31.16786872855275 30.578038848347074 14.14542569465374 6 22.64949522862552 40.34709102136718 26.359871642777094 10.64354210723021 7 89.30789676321287 3.253261735583119 6.012619214790189 1.4262222864138203 8 90.05050635761195 2.499464992713048 5.7167720123147685 1.7332566373602338 9 85.48676201345296 5.337355141037382 6.787204017132479 2.3886788283771763 10-11 36.65846275778794 31.238706754505262 20.33781848935092 11.76501199835588 12-13 27.893359759493002 25.298163944043107 29.378509376472312 17.429966919991575 14-15 16.012468939661474 31.662580018027448 35.15665764737607 17.168293394935006 16-17 21.816497927177227 28.249303099090582 31.40505297337431 18.529146000357876 18-19 22.891132069853445 29.32403464231319 30.19290317356026 17.591930114273104 20-21 24.15227434450128 30.07155600712304 30.082784898685343 15.693384749690336 22-23 20.288742528334513 25.317866683141272 33.18969535613675 21.203695432387462 24-25 18.505046322308427 29.510960205197907 33.73701685502541 18.246976617468256 26-27 17.788414845067734 34.48619402912388 29.525709430793988 18.199681695014398 28-29 16.198684869993926 29.766553153287035 34.76933741747739 19.265424559241655 30-31 21.155162131558082 29.029704105488683 31.128254534899867 18.68687922805336 32-33 23.527686383598414 29.026044627817203 29.23321558998711 18.213053398597264 34-35 18.320541858719672 29.395637958273053 31.01357234870843 21.27024783429885 36-37 21.41747571734807 29.795870717750194 29.96058895605816 18.82606460884358 38-39 19.085901437882523 30.60589540461439 29.374585525889202 20.93361763161388 40-41 19.530743647605934 27.67591999686092 29.901063307850567 22.892273047682576 42-43 19.863255198615022 27.292537531909115 30.16582582166405 22.678381447811812 44-45 18.914476476237464 30.479650382130174 29.045900424916844 21.55997271671552 46-47 19.493620125067867 29.61897741114357 30.029270255626344 20.85813220816222 48-49 19.819271894738392 27.777160907650643 31.43304867327933 20.97051852433163 50-51 18.24417983035051 30.46600039127191 29.964693693370283 21.3251260850073 52-53 20.566459314817767 27.438415721672648 30.643686816613418 21.351438146896164 54-55 20.460000517614333 27.514708178222964 31.16344396087392 20.861847343288783 56-57 20.8312914004501 26.893070062439318 30.665768911916235 21.60986962519435 58-59 21.6643304449897 28.455736599980685 29.546247031718348 20.33368592331126 60-61 21.762134507928266 29.25293224344905 28.740911485444602 20.244021763178086 62-63 20.421610787973204 27.921327630670483 31.123579308673182 20.533482272683127 64-65 19.155779372734916 30.61667903653606 30.475392586816586 19.752149003912443 66-67 18.187590112898363 30.380385310995774 28.000876048342953 23.431148527762915 68-69 17.466686925980316 32.173960715298485 27.264082657999687 23.095269700721516 70-71 18.22045584012285 30.866483609296907 29.883545123864273 21.029515426715967 72-73 20.453307708641013 30.55541409285723 28.700323286327826 20.290954912173927 74-75 19.803729550407425 32.09990847131512 26.780642003178595 21.315719975098855 76-77 21.66175628769227 29.888596037912745 28.16338190281151 20.286265771583476 78-79 17.917929743037877 30.2362325023397 30.02064335008901 21.82519440453341 80-81 16.116158778474702 29.53557471470684 31.09209110346192 23.256175403356536 82-83 17.551341915156332 29.286730233046114 30.94771566498553 22.21421218681202 84-85 16.85933886178835 28.735707513394665 29.898544808008214 24.506408816808776 86 17.167959450204528 29.196175553631665 30.383989131212175 23.25187586495164 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1958.0 1 2785.0 2 8813.0 3 8913.5 4 4433.0 5 6459.5 6 9252.0 7 10638.0 8 11880.0 9 12921.0 10 12411.5 11 11647.0 12 10833.0 13 10067.0 14 9659.0 15 9474.0 16 9263.5 17 9216.0 18 9761.5 19 10372.5 20 11116.0 21 11816.0 22 12441.5 23 13811.5 24 16360.0 25 22348.5 26 30440.5 27 34716.5 28 42175.5 29 49266.0 30 55937.0 31 66113.5 32 74391.5 33 82199.0 34 89768.5 35 101974.5 36 109646.0 37 111425.0 38 118249.5 39 131340.0 40 149483.0 41 168972.0 42 184544.5 43 190726.0 44 194038.5 45 195702.0 46 196092.0 47 196017.0 48 190497.5 49 173455.5 50 159819.0 51 143617.5 52 116032.5 53 98429.5 54 86203.0 55 75391.0 56 63485.5 57 56385.0 58 50155.0 59 38273.5 60 28918.5 61 21597.0 62 16154.0 63 11481.0 64 8633.0 65 7100.0 66 4817.0 67 3244.5 68 1990.0 69 1232.5 70 861.5 71 816.0 72 619.5 73 279.5 74 124.5 75 82.0 76 54.0 77 44.5 78 28.5 79 25.0 80 33.0 81 26.5 82 10.0 83 8.0 84 7.5 85 5.5 86 4.0 87 2.5 88 0.5 89 1.5 90 2.5 91 1.5 92 1.0 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3593409.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.68933971251048 #Duplication Level Percentage of deduplicated Percentage of total 1 74.9441830449743 12.507689303141442 2 10.88772530482042 3.634178926172895 3 3.9749486775356826 1.9901780645756186 4 1.9409229359414588 1.2957088893492092 5 1.2059537398314408 1.00632858208097 6 0.8145417756258079 0.815649864207036 7 0.5794619985458238 0.6769586700955056 8 0.4396782130593909 0.5870351249550191 9 0.3570840574731842 0.5363547426982431 >10 2.6263932059681614 9.053577326295517 >50 0.6843191853963491 8.330335459775718 >100 1.524754155277117 56.006224387305146 >500 0.015656593413714982 1.6471339829641873 >1k 0.00420876167035349 1.3274510807711175 >5k 0.0 0.0 >10k+ 1.683504668141396E-4 0.5851955956123447 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20828 0.5796167371985766 No Hit CTGTCTCTTATACACATCTGACGCAGTCTCCTTCGTATGCCGTCTTCTGC 3872 0.10775283303403538 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.7828727539781863E-5 0.0 0.0 0.11501613092191844 0.0 2 2.7828727539781863E-5 0.0 0.0 0.33717286287199705 0.0 3 2.7828727539781863E-5 0.0 0.0 0.49293025091215614 0.0 4 2.7828727539781863E-5 0.0 0.0 0.7069888231481583 0.0 5 2.7828727539781863E-5 0.0 0.0 1.171255484694339 0.0 6 2.7828727539781863E-5 0.0 0.0 1.5143280378047699 0.0 7 2.7828727539781863E-5 0.0 0.0 1.7613914809029532 0.0 8 2.7828727539781863E-5 0.0 0.0 2.228441015203112 0.0 9 2.7828727539781863E-5 0.0 0.0 2.38436537560851 0.0 10 2.7828727539781863E-5 0.0 0.0 2.6888116548937235 0.0 11 2.7828727539781863E-5 0.0 0.0 3.324698079177739 0.0 12 2.7828727539781863E-5 0.0 0.0 3.822498357409357 0.0 13 2.7828727539781863E-5 0.0 0.0 3.995843501254658 0.0 14 2.7828727539781863E-5 0.0 0.0 4.067446817214517 0.0 15 2.7828727539781863E-5 0.0 0.0 4.180097506295554 0.0 16 2.7828727539781863E-5 0.0 0.0 4.413357900534005 2.7828727539781863E-5 17 2.7828727539781863E-5 0.0 0.0 4.718583384190333 2.7828727539781863E-5 18 2.7828727539781863E-5 0.0 0.0 5.0465449382466625 2.7828727539781863E-5 19 2.7828727539781863E-5 0.0 0.0 5.304851187270917 2.7828727539781863E-5 20 2.7828727539781863E-5 0.0 0.0 5.5538626412968854 2.7828727539781863E-5 21 2.7828727539781863E-5 0.0 0.0 5.851101280149296 2.7828727539781863E-5 22 2.7828727539781863E-5 0.0 0.0 6.176558248727044 2.7828727539781863E-5 23 2.7828727539781863E-5 0.0 0.0 6.503490139864402 2.7828727539781863E-5 24 2.7828727539781863E-5 0.0 0.0 6.730099468220845 2.7828727539781863E-5 25 2.7828727539781863E-5 0.0 0.0 6.937562632029919 2.7828727539781863E-5 26 2.7828727539781863E-5 0.0 0.0 7.1409906303457245 2.7828727539781863E-5 27 2.7828727539781863E-5 0.0 0.0 7.386022576333504 2.7828727539781863E-5 28 2.7828727539781863E-5 0.0 0.0 7.608596739196679 2.7828727539781863E-5 29 2.7828727539781863E-5 0.0 0.0 7.877895335599148 2.7828727539781863E-5 30 2.7828727539781863E-5 0.0 0.0 8.182007670153885 2.7828727539781863E-5 31 2.7828727539781863E-5 0.0 0.0 8.452363758202866 2.7828727539781863E-5 32 2.7828727539781863E-5 0.0 0.0 8.692664820508881 2.7828727539781863E-5 33 2.7828727539781863E-5 0.0 0.0 8.922780568535337 2.7828727539781863E-5 34 2.7828727539781863E-5 0.0 0.0 9.181699049565468 2.7828727539781863E-5 35 2.7828727539781863E-5 0.0 0.0 9.475709556023263 2.7828727539781863E-5 36 2.7828727539781863E-5 0.0 0.0 9.729563208641153 2.7828727539781863E-5 37 2.7828727539781863E-5 0.0 0.0 10.00943672150874 2.7828727539781863E-5 38 2.7828727539781863E-5 0.0 0.0 10.322120304145729 2.7828727539781863E-5 39 5.5657455079563726E-5 0.0 0.0 10.80550530151174 2.7828727539781863E-5 40 5.5657455079563726E-5 0.0 0.0 11.127594994057175 2.7828727539781863E-5 41 5.5657455079563726E-5 0.0 0.0 11.43332139480922 2.7828727539781863E-5 42 5.5657455079563726E-5 0.0 0.0 11.75847224738403 2.7828727539781863E-5 43 5.5657455079563726E-5 0.0 0.0 12.040210284996782 2.7828727539781863E-5 44 5.5657455079563726E-5 0.0 0.0 12.325176455004147 2.7828727539781863E-5 45 5.5657455079563726E-5 0.0 0.0 12.606385746793643 2.7828727539781863E-5 46 5.5657455079563726E-5 0.0 0.0 12.912195633728306 2.7828727539781863E-5 47 8.348618261934558E-5 0.0 0.0 13.235454132830412 2.7828727539781863E-5 48 8.348618261934558E-5 0.0 0.0 13.54067961648674 2.7828727539781863E-5 49 8.348618261934558E-5 0.0 0.0 13.85695310497636 2.7828727539781863E-5 50 8.348618261934558E-5 0.0 0.0 14.196714039509558 2.7828727539781863E-5 51 8.348618261934558E-5 0.0 0.0 14.528933388879473 2.7828727539781863E-5 52 8.348618261934558E-5 0.0 0.0 14.931809877472896 2.7828727539781863E-5 53 8.348618261934558E-5 0.0 0.0 15.268008734881 2.7828727539781863E-5 54 8.348618261934558E-5 0.0 0.0 15.600088940613217 2.7828727539781863E-5 55 8.348618261934558E-5 0.0 0.0 15.926993003023036 2.7828727539781863E-5 56 8.348618261934558E-5 0.0 0.0 16.263609291344235 2.7828727539781863E-5 57 8.348618261934558E-5 0.0 0.0 16.595272066163357 2.7828727539781863E-5 58 8.348618261934558E-5 0.0 0.0 16.91616512342458 2.7828727539781863E-5 59 1.1131491015912745E-4 0.0 0.0 17.249998538991804 2.7828727539781863E-5 60 1.1131491015912745E-4 0.0 0.0 17.623209604027817 2.7828727539781863E-5 61 1.1131491015912745E-4 0.0 0.0 17.99803473526114 2.7828727539781863E-5 62 1.1131491015912745E-4 0.0 0.0 18.42289591861099 2.7828727539781863E-5 63 1.1131491015912745E-4 0.0 0.0 18.81711767293954 2.7828727539781863E-5 64 1.391436376989093E-4 0.0 0.0 19.195449223842875 2.7828727539781863E-5 65 1.6697236523869117E-4 0.0 0.0 19.548122687954532 2.7828727539781863E-5 66 1.6697236523869117E-4 0.0 0.0 19.89756801967157 2.7828727539781863E-5 67 1.6697236523869117E-4 0.0 0.0 20.25586288674626 2.7828727539781863E-5 68 1.6697236523869117E-4 0.0 0.0 20.659435093528177 2.7828727539781863E-5 69 1.9480109277847304E-4 0.0 0.0 21.236547245248175 2.7828727539781863E-5 70 1.9480109277847304E-4 0.0 0.0 21.636613032360078 2.7828727539781863E-5 71 1.9480109277847304E-4 0.0 0.0 22.032476681613478 2.7828727539781863E-5 72 1.9480109277847304E-4 0.0 0.0 22.415566944926113 2.7828727539781863E-5 73 2.504585478580368E-4 0.0 0.0 22.79634742385295 5.5657455079563726E-5 74 2.504585478580368E-4 0.0 0.0 23.208713508537436 5.5657455079563726E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TATTGCG 185 0.0 73.51351 1 CGTTAGG 655 0.0 73.28244 2 TACGGGA 1410 0.0 72.34042 4 CGTTTTT 9930 0.0 71.58106 1 TATAGCG 410 0.0 68.29269 1 CTACGGG 675 0.0 67.55556 3 GCGGGAT 2985 0.0 67.53769 5 CGAACGG 505 0.0 67.32673 2 GCGAATG 310 0.0 67.09678 1 CGGGATT 2235 0.0 66.75616 6 CGTAAGG 625 0.0 66.56 2 CGAGGGA 2545 0.0 66.32613 4 TAGCGGG 2785 0.0 65.637344 3 TCGAACG 385 0.0 65.454544 1 AGCGGGA 3510 0.0 65.07123 4 TAGGGAG 4740 0.0 64.81013 5 TAGGGAC 4395 0.0 63.79977 5 TGCGGGC 410 0.0 63.414635 4 ATCGCGG 265 0.0 63.396225 2 GTACGGG 1375 0.0 62.836365 3 >>END_MODULE