##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547805_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 956522 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7546475669143 31.0 31.0 33.0 30.0 34.0 2 32.18008158725048 33.0 31.0 34.0 30.0 34.0 3 32.312370232989934 34.0 31.0 34.0 30.0 34.0 4 35.895264301291554 37.0 35.0 37.0 35.0 37.0 5 35.842505452043966 37.0 35.0 37.0 35.0 37.0 6 35.918674113088876 37.0 35.0 37.0 35.0 37.0 7 36.20646258005566 37.0 35.0 37.0 35.0 37.0 8 36.159703592808114 37.0 35.0 37.0 35.0 37.0 9 38.02820008321816 39.0 39.0 39.0 35.0 39.0 10-11 37.46261351019631 39.0 37.5 39.0 34.5 39.0 12-13 36.014790041420895 37.0 35.0 39.0 32.5 39.0 14-15 36.884656599639115 38.0 35.0 41.0 32.5 41.0 16-17 37.20908457934057 38.0 35.0 41.0 33.0 41.0 18-19 37.10561126665147 38.0 35.0 41.0 33.0 41.0 20-21 36.80648693913993 37.0 35.0 41.0 33.0 41.0 22-23 36.5782810013779 37.0 35.0 41.0 32.0 41.0 24-25 36.512766041972895 36.5 35.0 40.5 32.0 41.0 26-27 36.468529735855526 36.5 35.0 40.5 32.5 41.0 28-29 36.52452635694736 36.0 35.0 41.0 32.0 41.0 30-31 36.34767888245121 36.0 35.0 40.0 32.0 41.0 32-33 35.907406207071034 36.0 35.0 40.0 31.0 41.0 34-35 35.63055214621305 36.0 35.0 40.0 30.0 41.0 36-37 35.36312390096621 36.0 35.0 40.0 30.0 41.0 38-39 35.32084625340556 35.5 35.0 40.0 30.0 41.0 40-41 35.1916437886426 36.0 35.0 40.0 29.0 41.0 42-43 35.10927349292541 35.5 35.0 40.0 29.0 41.0 44-45 34.97557662029729 35.0 34.0 40.0 28.0 41.0 46-47 34.87452144331233 35.0 34.0 40.0 28.0 41.0 48-49 34.83856565766391 35.5 34.0 40.0 28.0 41.0 50-51 34.63651646276824 35.0 34.0 40.0 27.5 41.0 52-53 34.45649917095477 35.0 34.0 39.5 27.0 41.0 54-55 34.26866710854533 35.0 34.0 39.0 26.5 41.0 56-57 33.92573458843602 35.0 34.0 39.0 25.5 41.0 58-59 33.62786114694696 35.0 33.0 38.0 24.5 40.0 60-61 33.32765895609302 35.0 33.0 37.5 24.5 40.0 62-63 32.815732413891155 35.0 32.0 37.0 22.5 40.0 64-65 32.615310468551684 35.0 32.0 36.5 23.0 40.0 66-67 32.431978564005846 35.0 32.5 36.0 22.0 39.0 68-69 32.23828516228586 35.0 32.5 36.0 21.0 39.0 70-71 32.054916144113776 35.0 32.0 35.0 20.0 38.5 72-73 31.879866850945405 35.0 32.0 35.0 20.0 37.5 74-75 31.626225533756674 35.0 32.0 35.0 19.5 37.0 76-77 29.58245550023941 32.5 28.5 34.5 16.0 35.5 78-79 30.498284932285927 34.0 30.0 35.0 17.5 36.0 80-81 31.0597910973297 34.5 31.5 35.0 18.5 36.0 82-83 31.01071486071413 34.5 31.5 35.0 18.0 36.0 84-85 30.893751006249726 34.0 31.0 35.0 18.0 35.5 86 30.54426871519944 34.0 31.0 35.0 17.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 3.0 10 6.0 11 12.0 12 21.0 13 84.0 14 242.0 15 668.0 16 1760.0 17 3578.0 18 6223.0 19 8446.0 20 9736.0 21 10072.0 22 8627.0 23 7745.0 24 8268.0 25 9531.0 26 10928.0 27 13266.0 28 15809.0 29 19548.0 30 24095.0 31 29446.0 32 36496.0 33 51732.0 34 158479.0 35 132736.0 36 67069.0 37 116053.0 38 141675.0 39 63915.0 40 252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.48602750381068 23.76704351807904 29.23529202673854 14.51163695137174 2 30.606196198310126 26.100915608841195 30.124659966001825 13.168228226846848 3 28.597564927936837 24.854420494248956 33.495936319290095 13.05207825852411 4 24.884320486094413 27.941646925005386 33.41637725007893 13.75765533882127 5 22.35724844802315 31.872868580126752 32.05352307631189 13.716359895538211 6 22.711030169719045 40.46660714547078 26.921388112348698 9.90097457246148 7 87.24190347948087 4.513644223551575 6.893202665490182 1.3512496314773732 8 87.73859879856396 4.039635261917656 6.281089196066583 1.9406767434517973 9 83.9357589266112 5.982298368464082 8.201588672293997 1.8803540326307182 10-11 51.22213603032654 23.66223672848089 16.3952841649225 8.72034307627007 12-13 34.06335661908456 31.35876644760915 21.37232598936564 13.205550943940652 14-15 12.191983038550081 37.132026236720115 37.28717164895319 13.388819075776615 16-17 15.176911769933154 22.406802979962823 38.61322583275659 23.80305941734743 18-19 23.632964009191635 26.101229245119296 31.558709574897385 18.70709717079168 20-21 28.085030976809733 27.87578330660455 27.038688080357797 17.00049763622792 22-23 20.00894908846843 27.486247049205346 27.340981179732402 25.16382268259381 24-25 16.76286588285476 25.641543006851908 39.84100731608891 17.75458379420442 26-27 14.402177890315121 40.00456863511764 28.64126491601866 16.951988558548575 28-29 13.018100995063364 29.921475930506563 40.11345269633108 16.94697037809899 30-31 23.112484605686017 32.36700253627204 28.015926450201878 16.504586407840073 32-33 29.158451138604235 30.57091211702397 25.366588536384942 14.904048207986854 34-35 18.783990331639 30.9614938286835 28.339808180052316 21.914707659625186 36-37 24.931522745948342 30.509543951942558 29.20973067007345 15.349202632035647 38-39 17.730956527920945 34.90066093618338 27.70035608172107 19.6680264541746 40-41 20.398276255015567 26.823690411720797 27.990940093379972 24.78709323988366 42-43 20.99047382077987 24.890279575378297 27.33016072813798 26.78908587570385 44-45 16.93442492697502 36.72461271146926 26.450567786208783 19.890394575346935 46-47 20.85278749469432 33.60079538160126 25.172499952954556 20.373917170749863 48-49 20.950119286331102 26.401117799695147 32.452625240193115 20.196137673780633 50-51 18.213695032628628 35.829024319357 26.81929950382741 19.13798114418696 52-53 23.205791398420526 26.87402903435572 29.619496467410055 20.3006830998137 54-55 24.158618411285886 28.31393318710913 30.389473530143583 17.1379748714614 56-57 24.778259151383867 24.03347753632431 28.28335364999446 22.904909662297364 58-59 26.813131323691458 27.090751702522265 26.603726835347224 19.492390138439053 60-61 27.110249424477427 30.491300775099788 23.983504822680505 18.41494497774228 62-63 24.378268351381358 25.335695362992173 32.59344792905966 17.692588356566812 64-65 17.710151988140368 32.357332084363975 31.849764040973444 18.082751886522214 66-67 15.78787523967039 29.520282858104675 23.08180052314531 31.61004137907962 68-69 15.850654768003244 35.06124271057017 20.990055639075734 28.098046882350854 70-71 17.74041788897694 32.376359351901996 28.46667405454344 21.416548704577625 72-73 23.973207098216246 31.983320822730683 24.684534176945224 19.358937902107844 74-75 23.30328000819636 35.57158120775058 20.57344211633397 20.551696667719092 76-77 31.433411881796758 28.63248310023188 22.454737057798983 17.47936796017237 78-79 18.20611548924123 29.769571426480518 31.932093563974483 20.092219520303768 80-81 13.964864373218807 28.808955779375694 33.1702773171971 24.0559025302084 82-83 18.115004150453416 24.904184117040696 34.1399884163668 22.840823316139094 84-85 14.390259711747353 25.928363383173625 30.509439406516524 29.1719374985625 86 16.695799992054546 25.356761266337834 34.58979511187406 23.357643629733555 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1724.0 1 1423.0 2 2812.5 3 2903.0 4 1369.5 5 1866.0 6 2596.5 7 2897.0 8 3159.5 9 3160.0 10 2676.0 11 2408.0 12 2498.5 13 2619.5 14 2604.0 15 2659.0 16 2754.5 17 2864.0 18 2968.5 19 3147.0 20 3342.0 21 3394.0 22 3183.5 23 3651.0 24 4511.5 25 5208.0 26 5891.0 27 6440.5 28 7572.0 29 8323.0 30 10940.5 31 14458.0 32 14679.0 33 15945.0 34 18326.0 35 21180.5 36 23599.0 37 22442.5 38 23764.5 39 26977.0 40 31877.5 41 41286.5 42 51535.0 43 56541.0 44 58158.0 45 61807.0 46 64393.5 47 69874.0 48 68315.5 49 53586.0 50 45341.0 51 36700.5 52 25758.0 53 21835.0 54 19390.0 55 18926.0 56 19173.0 57 19060.0 58 16340.5 59 11871.0 60 8627.0 61 6870.5 62 6077.0 63 4333.5 64 3121.0 65 2560.5 66 1537.5 67 842.5 68 585.5 69 388.0 70 193.0 71 171.0 72 116.0 73 75.0 74 60.0 75 29.0 76 27.5 77 23.0 78 41.5 79 65.0 80 35.5 81 3.5 82 1.5 83 2.0 84 1.0 85 0.0 86 0.0 87 0.0 88 1.0 89 1.0 90 0.5 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 956522.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.78537375084402 #Duplication Level Percentage of deduplicated Percentage of total 1 80.20777074908342 15.869407219926298 2 9.963244854195189 3.9425304642285046 3 3.198028488645798 1.8982256674111186 4 1.3810804754597612 1.0930077354785896 5 0.7012593076797008 0.6937338749350501 6 0.4181914544036792 0.49644445348715033 7 0.2720198046843511 0.3767409452318035 8 0.2081353459451559 0.32944284882289016 9 0.16895769118623055 0.3008601961379331 >10 1.3187787533914235 5.814111593286219 >50 0.6908387681519622 10.088978320501553 >100 1.4605087912665216 56.51488735432264 >500 0.007989654219182284 0.9762915490956852 >1k 0.002663218073060761 0.8632128755011612 >5k 5.326436146121523E-4 0.7421249016333997 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7042 0.7362088901248481 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2567 0.26836810862687943 No Hit GAGAAAGGAAAGAAGGAAGGAGAGAAAGAAAGAAAGAAAGAAAGAAAGAA 1830 0.1913181296405101 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1383 0.14458632420372977 No Hit TAGATCTGGGGCTTTTAACCATTGTAGGCCTAAAAGCAGCCACCAATAAA 1224 0.12796360146447233 No Hit AGGCAGGAGACTCAGCCCGAGGAAATCGCAGATAAGTTTTTAATTAAAAA 1187 0.1240954207012489 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0454542603306563E-4 0.0 0.0 0.05812725687438449 0.0 2 1.0454542603306563E-4 0.0 0.0 0.1797135873508398 0.0 3 1.0454542603306563E-4 0.0 0.0 0.254881748668614 0.0 4 1.0454542603306563E-4 0.0 0.0 0.42173624861738673 0.0 5 1.0454542603306563E-4 0.0 0.0 0.6686725449074877 0.0 6 1.0454542603306563E-4 0.0 0.0 0.9198952036649445 0.0 7 1.0454542603306563E-4 0.0 0.0 1.0627042556261121 0.0 8 1.0454542603306563E-4 0.0 0.0 1.3421541794124965 0.0 9 1.0454542603306563E-4 0.0 0.0 1.432063245800933 0.0 10 1.0454542603306563E-4 0.0 0.0 1.5756041157443321 0.0 11 1.0454542603306563E-4 0.0 0.0 1.8386404076435252 0.0 12 1.0454542603306563E-4 0.0 0.0 2.044072169798499 0.0 13 1.0454542603306563E-4 0.0 0.0 2.1148494232228847 0.0 14 1.0454542603306563E-4 0.0 0.0 2.1440175970861097 0.0 15 1.0454542603306563E-4 0.0 0.0 2.190226675392725 0.0 16 1.0454542603306563E-4 0.0 0.0 2.291322102366699 0.0 17 1.0454542603306563E-4 0.0 0.0 2.4034993445001787 0.0 18 1.0454542603306563E-4 0.0 0.0 2.554776575970025 0.0 19 1.0454542603306563E-4 0.0 0.0 2.642281097559701 0.0 20 1.0454542603306563E-4 0.0 0.0 2.72853107403698 0.0 21 1.0454542603306563E-4 0.0 0.0 2.8412310433006245 0.0 22 1.0454542603306563E-4 0.0 0.0 2.9609355561084847 0.0 23 1.0454542603306563E-4 0.0 0.0 3.0945446105787426 0.0 24 1.0454542603306563E-4 0.0 0.0 3.176508224588666 0.0 25 1.0454542603306563E-4 0.0 0.0 3.255962748373796 0.0 26 1.0454542603306563E-4 0.0 0.0 3.3299809100052062 0.0 27 1.0454542603306563E-4 0.0 0.0 3.4051490713229806 0.0 28 1.0454542603306563E-4 0.0 0.0 3.4860672310725733 0.0 29 1.0454542603306563E-4 0.0 0.0 3.5783808422597705 0.0 30 1.0454542603306563E-4 0.0 0.0 3.697248991659366 0.0 31 1.0454542603306563E-4 0.0 0.0 3.8144444142424323 0.0 32 1.0454542603306563E-4 0.0 0.0 3.910312569914754 0.0 33 1.0454542603306563E-4 0.0 0.0 4.013185269131291 0.0 34 1.0454542603306563E-4 0.0 0.0 4.123794329874274 0.0 35 1.0454542603306563E-4 0.0 0.0 4.261480655959821 0.0 36 1.0454542603306563E-4 0.0 0.0 4.375121534057763 0.0 37 1.0454542603306563E-4 0.0 0.0 4.4920033203627305 0.0 38 1.0454542603306563E-4 0.0 0.0 4.611603287744558 0.0 39 1.0454542603306563E-4 0.0 0.0 4.740716888895394 0.0 40 1.0454542603306563E-4 0.0 0.0 4.884571395116892 0.0 41 1.0454542603306563E-4 0.0 0.0 5.029262264746655 0.0 42 1.0454542603306563E-4 0.0 0.0 5.17165313500369 0.0 43 1.0454542603306563E-4 0.0 0.0 5.299616736468163 0.0 44 1.0454542603306563E-4 0.0 0.0 5.436675789997512 0.0 45 1.0454542603306563E-4 0.0 0.0 5.577812115142151 0.0 46 1.0454542603306563E-4 0.0 0.0 5.724280257014476 0.0 47 1.0454542603306563E-4 0.0 0.0 5.885593849383496 0.0 48 1.0454542603306563E-4 0.0 0.0 6.02558017484177 0.0 49 1.0454542603306563E-4 0.0 0.0 6.204666489636412 0.0 50 1.0454542603306563E-4 0.0 0.0 6.377898260573201 0.0 51 1.0454542603306563E-4 0.0 0.0 6.5213345850905675 0.0 52 1.0454542603306563E-4 0.0 0.0 6.692893629210828 0.0 53 1.0454542603306563E-4 0.0 0.0 6.8652890367393535 0.0 54 1.0454542603306563E-4 0.0 0.0 7.066434436426972 0.0 55 1.0454542603306563E-4 0.0 0.0 7.2616207468307055 0.0 56 1.0454542603306563E-4 0.0 0.0 7.448443423151794 0.0 57 1.0454542603306563E-4 0.0 0.0 7.633593372656353 0.0 58 2.0909085206613127E-4 0.0 0.0 7.806825143593143 0.0 59 2.0909085206613127E-4 0.0 0.0 7.978384187713403 0.0 60 2.0909085206613127E-4 0.0 0.0 8.1750341340816 0.0 61 3.136362780991969E-4 0.0 0.0 8.393534074490708 0.0 62 3.136362780991969E-4 0.0 0.0 8.637543098851882 0.0 63 3.136362780991969E-4 0.0 0.0 8.925774838425044 0.0 64 4.1818170413226253E-4 0.0 0.0 9.163092955520103 0.0 65 4.1818170413226253E-4 0.0 0.0 9.378979260278383 0.0 66 4.1818170413226253E-4 0.0 0.0 9.55074739525071 0.0 67 4.1818170413226253E-4 0.0 0.0 9.752729158346593 0.0 68 4.1818170413226253E-4 0.0 0.0 10.00091999974909 0.0 69 4.1818170413226253E-4 0.0 0.0 10.25935629290283 0.0 70 4.1818170413226253E-4 0.0 0.0 10.475556233939209 0.0 71 4.1818170413226253E-4 0.0 0.0 10.682974359188812 0.0 72 4.1818170413226253E-4 0.0 0.0 10.902728844710316 0.0 73 4.1818170413226253E-4 0.0 0.0 11.139837870953308 0.0 74 4.1818170413226253E-4 0.0 0.0 11.39869234581118 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 25 1.2846394E-6 80.00001 1 CTATGCG 40 4.1836756E-11 80.0 1 CCGTATG 15 0.0013097236 80.0 80 CTACGCG 20 4.0905496E-5 80.0 1 CGGGACG 15 0.0013097236 80.0 6 ATACCGG 15 0.0013097236 80.0 2 TAGTCGG 70 0.0 80.0 2 CGTTAGG 165 0.0 77.57576 2 ACGTTAG 90 0.0 75.55556 1 TACGGGA 550 0.0 74.90909 4 CGATAGG 260 0.0 73.84615 2 AGTACGG 130 0.0 73.84615 2 GGTCATA 110 0.0 72.72727 9 CGTTTTT 3780 0.0 72.16931 1 GCGATAG 150 0.0 72.0 1 CGAACGG 90 0.0 71.111115 2 GGACCGT 85 0.0 70.588234 8 AGTGCGG 205 0.0 70.243904 2 TCGTGCA 40 3.7125574E-9 70.0 1 TAATGCG 40 3.7125574E-9 70.0 1 >>END_MODULE