##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547803_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2818795 Sequences flagged as poor quality 0 Sequence length 86 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.836114013257436 31.0 31.0 33.0 30.0 34.0 2 32.28672677509361 33.0 31.0 34.0 31.0 34.0 3 32.433261021110084 34.0 31.0 34.0 31.0 34.0 4 36.02712400156805 37.0 35.0 37.0 35.0 37.0 5 35.98475447842075 37.0 35.0 37.0 35.0 37.0 6 36.03760578545088 37.0 35.0 37.0 35.0 37.0 7 36.30429350130109 37.0 36.0 37.0 35.0 37.0 8 36.270995584992875 37.0 37.0 37.0 35.0 37.0 9 38.149223338341386 39.0 39.0 39.0 37.0 39.0 10-11 37.60350504382192 39.0 37.5 39.0 35.0 39.0 12-13 37.04429002463819 39.0 35.0 39.0 33.5 39.0 14-15 38.22097616179963 40.0 37.0 41.0 33.0 41.0 16-17 38.32507099664927 40.0 36.5 41.0 34.0 41.0 18-19 38.20498599578898 40.0 36.0 41.0 34.0 41.0 20-21 38.05197274012477 40.0 35.5 41.0 34.0 41.0 22-23 37.85981208282262 40.0 35.0 41.0 34.0 41.0 24-25 37.78043454738638 40.0 35.0 41.0 33.5 41.0 26-27 37.73835220368987 40.0 35.0 41.0 34.0 41.0 28-29 37.700371967454174 40.0 35.0 41.0 34.0 41.0 30-31 37.52331705569223 40.0 35.0 41.0 33.0 41.0 32-33 37.22363545415683 40.0 35.0 41.0 33.0 41.0 34-35 36.95190764138577 39.5 35.0 41.0 32.0 41.0 36-37 36.7811291704434 39.0 35.0 41.0 31.5 41.0 38-39 36.659751950744905 39.0 35.0 41.0 31.0 41.0 40-41 36.53560918761386 39.0 35.0 41.0 31.0 41.0 42-43 36.48185040061445 39.0 35.0 41.0 31.0 41.0 44-45 36.374122453034005 39.0 35.0 41.0 31.0 41.0 46-47 36.27845710667147 39.0 35.0 41.0 31.0 41.0 48-49 36.16570289786948 38.0 35.0 41.0 30.0 41.0 50-51 36.012499490030315 38.0 35.0 40.0 30.0 41.0 52-53 35.83401825957546 38.0 35.0 40.0 29.5 41.0 54-55 35.65210258284125 38.0 35.0 40.0 29.0 41.0 56-57 35.37424892551604 37.0 35.0 40.0 28.5 41.0 58-59 35.061017385088306 37.0 34.0 40.0 28.0 41.0 60-61 34.73566009589204 36.0 34.0 40.0 26.5 41.0 62-63 34.3308215035148 36.0 34.0 39.0 26.0 41.0 64-65 33.928971954328006 35.0 34.0 39.0 25.0 40.5 66-67 33.561058360043916 35.0 33.0 38.5 24.0 40.0 68-69 33.03094265457403 35.0 33.0 37.5 21.0 40.0 70-71 32.64582720630624 35.0 33.0 37.0 20.0 39.5 72-73 32.29911149977207 35.0 33.0 37.0 19.5 39.0 74-75 31.926430088034074 35.0 32.0 36.0 18.5 39.0 76-77 29.875531388412426 33.0 29.0 34.5 14.0 36.0 78-79 30.914214052458586 34.0 31.0 35.0 15.0 37.0 80-81 30.99021833797775 35.0 31.0 35.0 13.5 37.0 82-83 30.75624495573463 35.0 31.0 35.0 11.0 36.0 84-85 30.490479265076033 34.5 31.0 35.0 10.0 36.0 86 30.061738083117078 34.0 30.0 35.0 10.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 8.0 10 20.0 11 20.0 12 34.0 13 77.0 14 329.0 15 1021.0 16 2573.0 17 6235.0 18 13156.0 19 20024.0 20 21830.0 21 21218.0 22 18786.0 23 17374.0 24 18673.0 25 21756.0 26 26357.0 27 32882.0 28 41247.0 29 52512.0 30 66683.0 31 83491.0 32 102264.0 33 128230.0 34 270001.0 35 274423.0 36 253053.0 37 401097.0 38 594454.0 39 327819.0 40 1148.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.49849137663434 24.511679636156586 31.952483241952677 14.037345745256394 2 29.260056158748686 25.602926073020566 31.97834535679253 13.158672411438221 3 28.239974882884354 24.747950808767577 34.06196619477472 12.950108113573352 4 25.403656526991142 27.78336132992999 33.10574199258903 13.707240150489838 5 23.970668317490276 31.209612618157763 31.06742420076664 13.752294863585327 6 21.437848442330854 40.789096049907855 27.311705888509096 10.461349619252198 7 89.09707871625996 2.888149014029044 6.569615740059138 1.4451565296518547 8 89.571288440628 2.5172813205642837 6.265691545500826 1.6457386933068918 9 84.90883515828573 5.432569590906753 7.534850884863922 2.1237443659436037 10-11 35.320571378904816 31.613739204163483 21.508162175681452 11.55752724125025 12-13 26.981582555666517 25.953430455212246 30.318292036136008 16.74669495298523 14-15 15.708325720742375 32.890277583151665 34.54249067420653 16.85890602189943 16-17 20.374965189025808 28.913046177533307 32.48859885163696 18.223389781803927 18-19 21.000125940339757 30.502448741394815 30.957465867507217 17.539959450758214 20-21 23.608155257831804 30.395204333766735 30.233025104698996 15.763615303702469 22-23 19.976177763902662 27.236212636960122 32.023187212975756 20.764422386161463 24-25 18.57948165794249 30.412037767911464 32.957096915525966 18.051383658620086 26-27 17.248948575543803 34.86856972571613 29.963441825318977 17.919039873421088 28-29 15.768706131520737 31.373547916751658 34.885208041024626 17.972537910702975 30-31 20.585250080264792 30.53590275277202 31.435258683231666 17.443588483731524 32-33 22.480581241275083 30.119164394714765 30.058180889351654 17.3420734746585 34-35 18.03066558582657 30.33118761740389 30.90689461276893 20.73125218400061 36-37 20.092291209541667 30.832057670032764 31.032409238699515 18.043241881726058 38-39 18.670744059074888 31.662217365931188 29.611003992840914 20.05603458215301 40-41 18.71469901145702 29.19254504140954 29.835709939885664 22.257046007247776 42-43 19.239887966311848 29.657619656626323 29.928480077479918 21.17401229958191 44-45 18.567792265844094 32.3079720235065 28.795584638116644 20.328651072532764 46-47 19.88087108143728 31.218694513080948 28.979439796083078 19.920994609398697 48-49 19.48924983902696 29.05308828772578 31.33808950278399 20.119572370463263 50-51 18.046097711965576 30.847436581943704 30.080176103618744 21.02628960247198 52-53 19.337110360987587 28.690717132675488 31.114359149920446 20.857813356416482 54-55 19.338830954361704 28.80498581840822 31.80674720935719 20.049436017872885 56-57 19.83203815814914 28.4569647668596 30.636264786903624 21.07473228808764 58-59 20.446822134990306 30.210799295443618 29.82442852353577 19.517950046030307 60-61 21.294613478454448 30.946166713081297 28.447918348088457 19.311301460375798 62-63 20.655031671334736 29.527439916701997 30.814922688595658 19.002605723367612 64-65 18.50274674107198 32.484253023011604 30.14472496226224 18.868275273654167 66-67 17.40917661624914 32.21149462802368 27.627674236686246 22.751654519040937 68-69 16.741054244810282 33.553131746012035 27.783503234538166 21.922310774639516 70-71 17.671700141372465 32.661314497861675 29.202886339730277 20.464099021035583 72-73 19.4807533006125 32.56166198677094 28.505531619007414 19.45205309360915 74-75 19.11572143415892 33.255167544997065 26.84707472519286 20.782036295651157 76-77 21.107139752979553 31.286790986928814 27.98390801743298 19.622161242658652 78-79 17.754661122926642 31.730296101703033 29.818965196121038 20.696077579249287 80-81 15.995026243483473 30.990121665463434 31.062954205609135 21.95189788544396 82-83 17.548793012617093 30.54154346094696 30.701523168587997 21.208140357847945 84-85 16.1568684491068 29.89486642341852 30.48366411888768 23.464601008587003 86 16.87064862822589 30.49615172440706 30.171119219382753 22.462080427984297 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1915.0 1 2592.5 2 10138.0 3 10388.0 4 4402.0 5 6927.5 6 10789.0 7 12757.0 8 14449.5 9 16183.5 10 15283.5 11 13404.5 12 12103.0 13 11129.5 14 10520.0 15 10224.5 16 9958.0 17 10095.5 18 10375.5 19 10495.0 20 11474.0 21 12505.0 22 13604.5 23 15032.0 24 16906.5 25 19801.5 26 22580.5 27 29799.5 28 38086.0 29 40584.0 30 45004.5 31 53038.5 32 62030.5 33 67344.0 34 72571.0 35 83287.5 36 88712.0 37 92932.5 38 102904.5 39 109784.0 40 118893.5 41 135206.0 42 144908.0 43 146279.0 44 151299.5 45 153052.5 46 149770.5 47 145570.5 48 136765.5 49 122801.0 50 113456.0 51 99631.5 52 80174.0 53 68214.0 54 57649.0 55 50942.0 56 44954.5 57 41436.0 58 35182.5 59 25369.0 60 18469.0 61 13575.5 62 10438.0 63 7447.0 64 6040.0 65 4517.5 66 2553.0 67 1800.5 68 1342.0 69 864.0 70 417.5 71 301.0 72 225.0 73 176.5 74 175.0 75 123.5 76 76.0 77 35.5 78 31.5 79 43.0 80 33.5 81 14.5 82 4.5 83 3.0 84 2.5 85 2.5 86 2.0 87 1.0 88 1.0 89 1.0 90 1.0 91 1.0 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2818795.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.090804329742156 #Duplication Level Percentage of deduplicated Percentage of total 1 76.08949448271694 13.765201562358275 2 9.57022544494893 3.462661518321813 3 3.2850044726219703 1.7828511940959566 4 1.7335743390947507 1.2544701663850084 5 1.110308725786461 1.00431889519041 6 0.8322123371697595 0.9033234331521315 7 0.6358916615501848 0.8052654136813312 8 0.5108674498079898 0.7393602458328571 9 0.4136510333267314 0.6734951914238594 >10 3.3410012724128766 13.036792092374133 >50 1.0214387929943451 13.392085186585978 >100 1.4440503157560867 46.22956872477659 >500 0.009110724248371732 1.111283157611006 >1k 0.0029708883418603474 0.9316648287667703 >5k 0.0 0.0 >10k+ 1.9805922279068984E-4 0.9076583894438822 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25332 0.8986818835708167 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.095230408738485E-5 0.0 0.0 0.09766584657628526 0.0 2 7.095230408738485E-5 0.0 0.0 0.27909088812772836 0.0 3 7.095230408738485E-5 0.0 0.0 0.3917276708664518 0.0 4 7.095230408738485E-5 0.0 0.0 0.5534634480336456 0.0 5 7.095230408738485E-5 0.0 0.0 0.9724722798216968 0.0 6 7.095230408738485E-5 0.0 0.0 1.3398987865382193 0.0 7 7.095230408738485E-5 0.0 0.0 1.6366922745357502 0.0 8 7.095230408738485E-5 0.0 0.0 2.203530231889868 0.0 9 7.095230408738485E-5 0.0 0.0 2.4295133204081885 0.0 10 7.095230408738485E-5 0.0 0.0 2.810207907989052 0.0 11 7.095230408738485E-5 0.0 0.0 3.4391291314196315 0.0 12 7.095230408738485E-5 0.0 0.0 3.9130550465713188 0.0 13 7.095230408738485E-5 0.0 0.0 4.08976175990095 0.0 14 7.095230408738485E-5 0.0 0.0 4.168767150502253 0.0 15 7.095230408738485E-5 0.0 0.0 4.273776560551584 0.0 16 7.095230408738485E-5 0.0 0.0 4.482376334568495 0.0 17 7.095230408738485E-5 0.0 0.0 4.7799857740630305 0.0 18 7.095230408738485E-5 0.0 0.0 5.103067090724937 0.0 19 7.095230408738485E-5 0.0 0.0 5.340650880961546 0.0 20 7.095230408738485E-5 0.0 0.0 5.556594218451502 0.0 21 7.095230408738485E-5 0.0 0.0 5.807978231833106 0.0 22 7.095230408738485E-5 0.0 0.0 6.0940933980654854 0.0 23 7.095230408738485E-5 0.0 0.0 6.378647613607942 0.0 24 7.095230408738485E-5 0.0 0.0 6.586218579215587 0.0 25 7.095230408738485E-5 0.0 0.0 6.761222437247121 0.0 26 7.095230408738485E-5 0.0 0.0 6.930621063255753 0.0 27 7.095230408738485E-5 0.0 0.0 7.11381991240938 0.0 28 7.095230408738485E-5 0.0 0.0 7.308725891737427 0.0 29 7.095230408738485E-5 0.0 0.0 7.522788993169067 0.0 30 7.095230408738485E-5 0.0 0.0 7.767468013814414 0.0 31 7.095230408738485E-5 0.0 0.0 7.979792783795912 0.0 32 1.0642845613107729E-4 0.0 0.0 8.181439232012261 0.0 33 1.0642845613107729E-4 0.0 0.0 8.3803185403692 0.0 34 1.0642845613107729E-4 0.0 0.0 8.599099970022651 0.0 35 1.0642845613107729E-4 0.0 0.0 8.830617338259788 0.0 36 1.0642845613107729E-4 0.0 0.0 9.046205914229308 0.0 37 1.419046081747697E-4 0.0 0.0 9.267577102981948 0.0 38 1.419046081747697E-4 0.0 0.0 9.503777323288853 0.0 39 1.419046081747697E-4 0.0 0.0 9.782690830656362 0.0 40 1.419046081747697E-4 0.0 0.0 10.039538171452696 0.0 41 1.419046081747697E-4 0.0 0.0 10.295179323079543 0.0 42 1.419046081747697E-4 0.0 0.0 10.556815944401775 0.0 43 1.419046081747697E-4 0.0 0.0 10.799685681292893 0.0 44 1.419046081747697E-4 0.0 0.0 11.035389235471186 0.0 45 1.419046081747697E-4 0.0 0.0 11.27361159644458 0.0 46 1.419046081747697E-4 0.0 0.0 11.521731803838165 0.0 47 1.419046081747697E-4 0.0 0.0 11.783191044400178 0.0 48 1.419046081747697E-4 0.0 0.0 12.038512910658632 0.0 49 1.7738076021846214E-4 0.0 0.0 12.30366167103319 0.0 50 1.7738076021846214E-4 0.0 0.0 12.572748284284597 0.0 51 1.7738076021846214E-4 0.0 0.0 12.837506806986674 0.0 52 1.7738076021846214E-4 0.0 0.0 13.130185061347136 0.0 53 1.7738076021846214E-4 0.0 0.0 13.408318093369685 0.0 54 1.7738076021846214E-4 0.0 0.0 13.684074223205306 0.0 55 1.7738076021846214E-4 0.0 0.0 13.954934644058898 0.0 56 1.7738076021846214E-4 0.0 0.0 14.23349338990597 0.0 57 1.7738076021846214E-4 0.0 0.0 14.522269267541628 0.0 58 2.48333064305847E-4 0.0 0.0 14.801856821797967 0.0 59 2.48333064305847E-4 0.0 0.0 15.081337947598175 0.0 60 2.48333064305847E-4 0.0 0.0 15.378592625572274 0.0 61 2.48333064305847E-4 0.0 0.0 15.69386918878457 0.0 62 2.48333064305847E-4 0.0 0.0 16.031424775480303 0.0 63 2.838092163495394E-4 0.0 0.0 16.371818454339532 0.0 64 3.547615204369243E-4 0.0 0.0 16.68769811213657 0.0 65 3.547615204369243E-4 0.0 0.0 17.003542293781564 0.0 66 3.547615204369243E-4 0.0 0.0 17.29664626196655 0.0 67 3.902376724806167E-4 0.0 0.0 17.589963087063797 0.0 68 3.902376724806167E-4 0.0 0.0 17.92443224853173 0.0 69 4.2571382452430916E-4 0.0 0.0 18.280258053529966 0.0 70 4.611899765680016E-4 0.0 0.0 18.602026752566257 0.0 71 4.611899765680016E-4 0.0 0.0 18.923582594690284 0.0 72 4.611899765680016E-4 0.0 0.0 19.24595438831132 0.0 73 4.611899765680016E-4 0.0 0.0 19.57456998469204 0.0 74 4.611899765680016E-4 0.0 0.0 19.92273294084884 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGGGATA 715 0.0 72.72727 6 ACGGGAT 2075 0.0 71.710846 5 CGTTTTT 10715 0.0 71.37657 1 ACGGGTA 220 0.0 70.90909 5 TACGGGA 1835 0.0 70.84469 4 CGAGGGA 2330 0.0 68.8412 4 AGTACGG 425 0.0 68.70588 2 GCGCGAG 190 0.0 67.368416 1 GGCGCGA 120 0.0 66.66667 8 CAGCGCG 145 0.0 66.206894 1 TATAGCG 115 0.0 66.08696 1 ACGGGTC 170 0.0 65.882355 5 TACGCGG 170 0.0 65.882355 2 TAGGGAC 3285 0.0 65.87519 5 TTAGGGA 4560 0.0 65.61403 4 GGGCGAT 1725 0.0 65.159424 7 TAGCGAG 320 0.0 65.0 1 AGGGCGA 985 0.0 64.97462 6 TTGCGGG 2305 0.0 64.90239 3 CGCGAGG 450 0.0 64.888885 2 >>END_MODULE