##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547802_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2725773 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.703577664024113 31.0 31.0 33.0 30.0 34.0 2 32.14962214388359 33.0 31.0 34.0 30.0 34.0 3 32.28987300116334 34.0 31.0 34.0 30.0 34.0 4 35.890526467170965 37.0 35.0 37.0 35.0 37.0 5 35.83577062359925 37.0 35.0 37.0 35.0 37.0 6 35.894644198177915 37.0 35.0 37.0 35.0 37.0 7 36.21104288581624 37.0 35.0 37.0 35.0 37.0 8 36.18280649195659 37.0 35.0 37.0 35.0 37.0 9 38.04640041558853 39.0 39.0 39.0 35.0 39.0 10-11 37.3984647657747 39.0 37.0 39.0 34.5 39.0 12-13 36.763774899817406 39.0 35.0 39.0 33.0 39.0 14-15 37.86604442116053 40.0 36.0 41.0 33.0 41.0 16-17 37.99508249586448 40.0 36.0 41.0 33.0 41.0 18-19 37.88060286017948 40.0 36.0 41.0 33.5 41.0 20-21 37.691028746707815 40.0 35.0 41.0 33.0 41.0 22-23 37.485455868848945 39.0 35.0 41.0 33.0 41.0 24-25 37.3856795852039 39.0 35.0 41.0 33.0 41.0 26-27 37.32887716622037 39.0 35.0 41.0 33.0 41.0 28-29 37.31517554836738 39.0 35.0 41.0 33.0 41.0 30-31 37.14819300800177 39.0 35.0 41.0 32.5 41.0 32-33 36.839408490729056 39.0 35.0 41.0 31.5 41.0 34-35 36.56228416672995 39.0 35.0 41.0 31.0 41.0 36-37 36.36228640462724 39.0 35.0 41.0 30.0 41.0 38-39 36.238835735771104 39.0 35.0 41.0 30.0 41.0 40-41 36.09214780541153 38.0 35.0 41.0 30.0 41.0 42-43 36.03298660600131 38.0 35.0 41.0 30.0 41.0 44-45 35.90399530701933 38.0 35.0 41.0 29.5 41.0 46-47 35.811464307556065 38.0 35.0 40.5 29.0 41.0 48-49 35.69205964693318 38.0 35.0 40.0 29.0 41.0 50-51 35.51971936034292 38.0 35.0 40.0 28.0 41.0 52-53 35.33754296487639 37.0 35.0 40.0 28.0 41.0 54-55 35.16106146770109 37.0 34.0 40.0 27.5 41.0 56-57 34.851379590303374 36.5 34.0 40.0 26.5 41.0 58-59 34.56183970565414 36.0 34.0 40.0 26.0 41.0 60-61 34.237291586643494 35.5 34.0 39.0 26.0 41.0 62-63 33.82185952388552 35.0 33.0 39.0 24.5 40.5 64-65 33.475022865073505 35.0 33.0 38.5 24.0 40.0 66-67 33.160556840206425 35.0 33.0 38.0 23.0 40.0 68-69 32.7224271793726 35.0 32.5 37.0 21.0 40.0 70-71 32.42135056734365 35.0 32.0 36.5 20.5 39.0 72-73 32.12635002988143 35.0 32.0 36.0 20.0 39.0 74-75 31.807649793287993 35.0 32.0 36.0 19.5 38.5 76-77 29.733415988785566 33.0 28.5 34.5 16.0 36.0 78-79 30.830912552145758 34.0 30.5 35.0 17.5 37.0 80-81 31.0440445701091 34.5 31.0 35.0 18.0 36.5 82-83 30.853329129021382 34.5 31.0 35.0 16.0 36.0 84-85 30.64404684469323 34.0 31.0 35.0 15.0 36.0 86 30.23709494517702 34.0 30.0 35.0 11.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 4.0 9 7.0 10 8.0 11 19.0 12 40.0 13 112.0 14 410.0 15 1276.0 16 3267.0 17 7061.0 18 14167.0 19 21198.0 20 23946.0 21 23120.0 22 20954.0 23 20513.0 24 22354.0 25 25768.0 26 30686.0 27 37399.0 28 45535.0 29 55649.0 30 68419.0 31 82028.0 32 98593.0 33 125447.0 34 274024.0 35 276772.0 36 243582.0 37 389379.0 38 550416.0 39 262690.0 40 928.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.962903367228304 25.030550966643222 32.45714151545268 13.54940415067579 2 29.910781271954782 26.152214436051718 31.264855877580416 12.672148414413087 3 28.024123799010408 24.949913290651864 34.05349601746 12.972466892877726 4 25.99765277592815 26.790785586327253 32.430029940130744 14.78153169761385 5 23.760892781607275 31.323261328070974 30.61271059622353 14.303135294098224 6 21.582501550936193 41.13467996051028 26.652989812431187 10.629828676122333 7 88.4845509879216 3.516983989495824 6.7226801351396475 1.2757848874429383 8 90.06373604845305 2.5520833906565223 5.87077500584238 1.513405555048054 9 85.33073003511298 5.51751741616048 7.222171472092503 1.929581076634041 10-11 36.3104337741991 29.152904515526423 22.519171625810365 12.017490084464114 12-13 27.957298718565337 27.72206269560965 27.630290563447506 16.690348022377506 14-15 16.60385879528486 32.78303072192732 33.90381370715757 16.709296775630254 16-17 20.839648055799216 26.807551472554756 32.65422322401756 19.69857724762847 18-19 22.726892518195758 28.884228437217622 30.25303280940856 18.135846235178057 20-21 24.940961701506325 29.295487922141717 29.18656469192409 16.576985684427868 22-23 20.642272852508263 26.835506845214184 31.134709309982895 21.38751099229466 24-25 18.462157340321443 29.259076232687022 34.104930968206084 18.173835458785454 26-27 17.954026252369513 35.316257076433 29.08593268771831 17.64378398347918 28-29 16.09857093749186 30.473759186843512 35.34877996076709 18.078889914897537 30-31 21.291776681330397 31.097197015305383 29.81565229386306 17.79537400950116 32-33 23.188302914439316 30.96939840551653 28.294047229905058 17.548251450139098 34-35 18.299891443638188 30.873755811654163 29.827740607893617 20.998612136814035 36-37 21.655508364049393 30.989190956106764 29.443482637769176 17.91181804207467 38-39 19.25578542307081 32.54491478197194 28.283903318434806 19.91539647652244 40-41 20.227289653246988 28.978623678494138 28.940909606192445 21.853177062066433 42-43 20.56418491194975 28.853374804138127 28.060333710840922 22.5221065730712 44-45 19.145082881076302 33.32212550348103 27.973092403512688 19.559699211929974 46-47 20.73648465958097 32.12512560657105 27.256690120563963 19.881699613284013 48-49 20.649738624603003 29.661916087656603 30.075064944879852 19.61328034286054 50-51 18.705978084015065 32.609520308551005 28.366375336464188 20.31812627096974 52-53 21.062667360781695 29.055042367798052 29.280703125315277 20.601587146104976 54-55 21.01956032288822 29.438676661629565 30.138514835974966 19.403248179507244 56-57 21.459490573866567 27.53174970916507 29.46388052123196 21.544879195736403 58-59 22.039692960492307 29.494495689846513 28.401319552288466 20.064491797372707 60-61 22.41147740475821 31.314401456027337 26.979521038619136 19.294600100595318 62-63 21.98501122433893 28.898004345923155 29.492643004388114 19.6243414253498 64-65 19.164288442214374 33.1015642168295 28.8285744997841 18.905572841172027 66-67 18.076596987350012 31.909186861855332 25.997340937781686 24.01687521301297 68-69 17.88962250341463 34.16407015551185 25.493557240459864 22.45275010061366 70-71 18.91158948305673 32.112523676769854 28.04542051007182 20.93046633010159 72-73 21.14092039212363 31.74050076803901 27.103816055115377 20.014762784721984 74-75 20.552665243950983 33.427031524635396 24.837413093460096 21.182890137953528 76-77 23.952581524580367 31.047321255291614 25.7128161442644 19.287281075863618 78-79 18.456048981334835 31.84282036691977 29.0759355236111 20.625195128134294 80-81 16.845129803545635 30.748451907037012 29.75532078423258 22.651097505184765 82-83 18.66421011580935 29.749689354175864 30.651268465862714 20.93483206415208 84-85 16.769371477375408 29.37621731523498 29.1217023574597 24.73270884992991 86 17.98172481714361 29.5939170283072 30.055547545595324 22.36881060895386 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2412.0 1 2821.5 2 7888.5 3 7980.0 4 3680.0 5 5471.0 6 8940.0 7 10884.0 8 11652.0 9 12624.0 10 12302.0 11 11260.5 12 10372.5 13 9356.0 14 8712.0 15 8799.0 16 8844.0 17 8864.5 18 8934.0 19 8937.5 20 9201.0 21 9468.0 22 9969.0 23 11215.5 24 13534.0 25 17586.5 26 20862.0 27 23953.0 28 29707.5 29 33167.0 30 36601.5 31 44433.0 32 52140.0 33 56545.5 34 59649.5 35 68257.0 36 74856.0 37 79588.0 38 86583.0 39 97899.5 40 110442.0 41 124295.5 42 139166.5 43 143673.0 44 146855.0 45 152805.0 46 156974.0 47 160270.0 48 157041.0 49 137898.0 50 123879.0 51 108860.0 52 85948.5 53 73425.5 54 62928.0 55 55395.5 56 49135.0 57 44540.0 58 39192.5 59 29280.5 60 20374.0 61 14645.0 62 11417.0 63 7734.5 64 5893.0 65 4697.5 66 2874.0 67 2022.0 68 1718.5 69 1165.0 70 517.5 71 344.0 72 314.0 73 206.0 74 143.0 75 152.5 76 94.0 77 39.5 78 30.0 79 22.0 80 19.5 81 9.5 82 3.5 83 4.5 84 4.0 85 3.5 86 3.0 87 2.5 88 1.0 89 0.5 90 0.5 91 1.5 92 1.5 93 0.0 94 1.0 95 1.0 96 0.5 97 0.5 98 1.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2725773.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.486350091065248 #Duplication Level Percentage of deduplicated Percentage of total 1 78.62093154969317 13.747931335636117 2 8.687602660892544 3.0382892316087404 3 2.7754296886619465 1.4559640556723705 4 1.3651626830361354 0.9548685042731122 5 0.8742436979943008 0.764366568401793 6 0.6228287116691135 0.6534600539407952 7 0.5382989937041146 0.6589019260304794 8 0.4237713761598918 0.5928171713683495 9 0.34965227221532763 0.5502727837884298 >10 3.175079678607065 12.043642008967549 >50 1.0020473598087656 12.748273255205769 >100 1.5532963079819213 50.190751332152615 >500 0.008052558979549972 0.9101134487377722 >1k 0.0033905511492841986 0.9621760437248073 >5k 0.0 0.0 >10k+ 2.119094468302624E-4 0.728172280491265 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 19651 0.7209331077826364 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3283 0.12044289821639587 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCCTATAGCGTCGTATGC 3143 0.11530674050993975 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.337368152080162E-5 0.0 0.0 0.0497473560711035 0.0 2 7.337368152080162E-5 0.0 0.0 0.1760234619684031 0.0 3 7.337368152080162E-5 0.0 0.0 0.2783063740084005 0.0 4 7.337368152080162E-5 0.0 0.0 0.43103369209394915 0.0 5 7.337368152080162E-5 0.0 0.0 0.7509796303654046 0.0 6 7.337368152080162E-5 0.0 0.0 1.02605756238689 0.0 7 7.337368152080162E-5 0.0 0.0 1.2313938101228532 0.0 8 7.337368152080162E-5 0.0 0.0 1.6157251539288122 0.0 9 7.337368152080162E-5 0.0 0.0 1.7382958889093112 0.0 10 7.337368152080162E-5 0.0 0.0 1.9424581577409417 0.0 11 7.337368152080162E-5 0.0 0.0 2.3623757370844896 0.0 12 7.337368152080162E-5 0.0 0.0 2.6340784797560177 0.0 13 7.337368152080162E-5 0.0 0.0 2.7806057217530586 0.0 14 7.337368152080162E-5 0.0 0.0 2.817769491443345 0.0 15 7.337368152080162E-5 0.0 0.0 2.8938213123396554 0.0 16 7.337368152080162E-5 0.0 0.0 3.0300395520830237 0.0 17 7.337368152080162E-5 0.0 0.0 3.2093281428791025 0.0 18 7.337368152080162E-5 0.0 0.0 3.4167188536976485 0.0 19 7.337368152080162E-5 0.0 0.0 3.559173856370285 0.0 20 7.337368152080162E-5 0.0 0.0 3.696309267132663 0.0 21 7.337368152080162E-5 0.0 0.0 3.869801337088598 0.0 22 7.337368152080162E-5 0.0 0.0 4.075137584824562 0.0 23 7.337368152080162E-5 0.0 0.0 4.269357719810124 0.0 24 7.337368152080162E-5 0.0 0.0 4.417572556482143 0.0 25 7.337368152080162E-5 0.0 0.0 4.555294956696687 0.0 26 7.337368152080162E-5 0.0 0.0 4.68182787047931 0.0 27 7.337368152080162E-5 0.0 0.0 4.8155880918917315 0.0 28 7.337368152080162E-5 0.0 0.0 4.958520023494253 0.0 29 7.337368152080162E-5 0.0 0.0 5.127169430469816 0.0 30 7.337368152080162E-5 0.0 0.0 5.3027893371898545 0.0 31 7.337368152080162E-5 0.0 0.0 5.473456520407239 0.0 32 7.337368152080162E-5 0.0 0.0 5.6196168939966755 0.0 33 7.337368152080162E-5 0.0 0.0 5.778911156578336 0.0 34 7.337368152080162E-5 0.0 0.0 5.945616160993597 0.0 35 7.337368152080162E-5 0.0 0.0 6.145265948411698 0.0 36 7.337368152080162E-5 0.0 0.0 6.3174372921002595 0.0 37 1.1006052228120243E-4 0.0 0.0 6.500211132768576 0.0 38 1.1006052228120243E-4 0.0 0.0 6.6906525231558165 0.0 39 1.1006052228120243E-4 0.0 0.0 6.926328788200632 0.0 40 1.1006052228120243E-4 0.0 0.0 7.132618893796366 0.0 41 1.1006052228120243E-4 0.0 0.0 7.346136307021898 0.0 42 1.1006052228120243E-4 0.0 0.0 7.563395778004992 0.0 43 1.1006052228120243E-4 0.0 0.0 7.768511904696393 0.0 44 1.4674736304160323E-4 0.0 0.0 7.975645807629616 0.0 45 1.4674736304160323E-4 0.0 0.0 8.180578500117214 0.0 46 1.8343420380200406E-4 0.0 0.0 8.409651133825157 0.0 47 1.8343420380200406E-4 0.0 0.0 8.64246582529066 0.0 48 2.2012104456240486E-4 0.0 0.0 8.867319472311157 0.0 49 2.2012104456240486E-4 0.0 0.0 9.102995737355972 0.0 50 2.568078853228057E-4 0.0 0.0 9.350705286170198 0.0 51 2.568078853228057E-4 0.0 0.0 9.602817255875673 0.0 52 2.9349472608320646E-4 0.0 0.0 9.875473856406972 0.0 53 3.301815668436073E-4 0.0 0.0 10.133749215360194 0.0 54 3.301815668436073E-4 0.0 0.0 10.399361942465495 0.0 55 3.301815668436073E-4 0.0 0.0 10.659875198705102 0.0 56 3.301815668436073E-4 0.0 0.0 10.926368409988653 0.0 57 3.668684076040081E-4 0.0 0.0 11.192971681794486 0.0 58 3.668684076040081E-4 0.0 0.0 11.453191443308008 0.0 59 3.668684076040081E-4 0.0 0.0 11.725848043839306 0.0 60 3.668684076040081E-4 0.0 0.0 12.011418412318267 0.0 61 4.0355524836440895E-4 0.0 0.0 12.30179475693684 0.0 62 4.0355524836440895E-4 0.0 0.0 12.625592813488137 0.0 63 4.0355524836440895E-4 0.0 0.0 12.955260764561098 0.0 64 4.0355524836440895E-4 0.0 0.0 13.271427958234232 0.0 65 4.402420891248097E-4 0.0 0.0 13.567454076329907 0.0 66 4.402420891248097E-4 0.0 0.0 13.870193886284735 0.0 67 4.402420891248097E-4 0.0 0.0 14.17645563295256 0.0 68 4.402420891248097E-4 0.0 0.0 14.506490452433127 0.0 69 4.402420891248097E-4 0.0 0.0 14.899736698543862 0.0 70 4.402420891248097E-4 0.0 0.0 15.210804421351302 0.0 71 4.402420891248097E-4 0.0 0.0 15.538161101456357 0.0 72 4.7692892988521055E-4 0.0 0.0 15.853998113562648 0.0 73 5.136157706456114E-4 0.0 0.0 16.184032933043213 3.668684076040081E-5 74 5.136157706456114E-4 0.0 0.0 16.544774638240234 3.668684076040081E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9245 0.0 73.3802 1 GTCGACG 55 0.0 72.72727 1 CGGGATA 765 0.0 71.63399 6 GACGGGT 560 0.0 70.0 4 ACGGGTC 335 0.0 69.25373 5 TACGGGA 1340 0.0 68.95522 4 GCGCGAC 160 0.0 67.5 9 CGTAAGG 405 0.0 66.172844 2 CGCGGGA 900 0.0 64.888885 4 AGTACGG 425 0.0 64.0 2 CCGATCC 2170 0.0 63.594467 80 CGAGGGT 705 0.0 63.5461 4 GGCGCGA 170 0.0 63.52941 8 TACGAAG 265 0.0 63.39623 1 TAACGGG 815 0.0 63.312885 3 CTACGGG 645 0.0 63.255817 3 AGGGCGA 1110 0.0 63.06306 6 GGGCGAT 1965 0.0 62.900764 7 TGGGCGA 620 0.0 62.580647 6 GCGGGCT 495 0.0 62.222218 5 >>END_MODULE