##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547800_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2200477 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.74010816745642 31.0 31.0 33.0 30.0 34.0 2 32.17888303308783 33.0 31.0 34.0 30.0 34.0 3 32.330590594675606 34.0 31.0 34.0 30.0 34.0 4 35.93899913518751 37.0 35.0 37.0 35.0 37.0 5 35.88956939790782 37.0 35.0 37.0 35.0 37.0 6 35.9512273929698 37.0 35.0 37.0 35.0 37.0 7 36.20666201010054 37.0 35.0 37.0 35.0 37.0 8 36.157217730519335 37.0 35.0 37.0 35.0 37.0 9 38.02905506397022 39.0 39.0 39.0 35.0 39.0 10-11 37.495670256948834 39.0 37.0 39.0 35.0 39.0 12-13 36.70829665567965 39.0 35.0 39.0 33.0 39.0 14-15 37.72890127913175 40.0 35.0 41.0 33.0 41.0 16-17 37.91431766839644 40.0 35.0 41.0 33.0 41.0 18-19 37.8053358430922 40.0 36.0 41.0 33.5 41.0 20-21 37.63517182865351 40.0 35.0 41.0 33.0 41.0 22-23 37.438633532638605 39.0 35.0 41.0 33.0 41.0 24-25 37.363382575687 39.0 35.0 41.0 33.0 41.0 26-27 37.33914828466737 39.0 35.0 41.0 33.0 41.0 28-29 37.33700534020578 39.0 35.0 41.0 33.0 41.0 30-31 37.16664068745095 39.0 35.0 41.0 32.5 41.0 32-33 36.8768337501369 39.0 35.0 41.0 31.5 41.0 34-35 36.598540452820004 39.0 35.0 41.0 31.0 41.0 36-37 36.42702014154204 39.0 35.0 41.0 30.5 41.0 38-39 36.336924221430166 39.0 35.0 41.0 30.0 41.0 40-41 36.17354328175209 38.5 35.0 41.0 30.0 41.0 42-43 36.128928182389544 38.0 35.0 41.0 30.0 41.0 44-45 36.035733615938724 38.0 35.0 41.0 30.0 41.0 46-47 35.95855398624934 38.0 35.0 41.0 30.0 41.0 48-49 35.851745326127016 38.0 35.0 40.0 29.5 41.0 50-51 35.662317533880156 38.0 35.0 40.0 29.0 41.0 52-53 35.473661619730635 37.0 35.0 40.0 29.0 41.0 54-55 35.26940499718924 37.0 34.0 40.0 28.5 41.0 56-57 34.968269606998845 36.5 34.0 40.0 27.5 41.0 58-59 34.666076718820506 36.0 34.0 39.5 27.0 41.0 60-61 34.35938366999518 35.5 34.0 39.0 26.0 41.0 62-63 33.978644630232445 35.0 33.5 39.0 26.0 40.5 64-65 33.71453325801633 35.0 33.0 38.5 26.0 40.0 66-67 33.443410451461205 35.0 33.0 37.5 25.0 40.0 68-69 33.03277448480489 35.0 33.0 37.0 24.0 39.5 70-71 32.817078978785055 35.0 33.0 36.5 24.0 39.0 72-73 32.57011116226164 35.0 33.0 36.0 24.0 39.0 74-75 32.28665262122712 35.0 32.5 36.0 23.5 38.5 76-77 30.240867548263402 33.0 29.5 34.5 19.5 36.0 78-79 31.372701464273426 34.0 31.0 35.0 20.0 37.0 80-81 31.62573591998462 35.0 32.0 35.0 20.0 36.5 82-83 31.498951590950504 35.0 32.0 35.0 20.0 36.0 84-85 31.302211520502144 34.0 32.0 35.0 20.0 36.0 86 30.88656504930522 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 11.0 10 25.0 11 48.0 12 61.0 13 133.0 14 344.0 15 919.0 16 2286.0 17 4937.0 18 9336.0 19 14213.0 20 17266.0 21 17884.0 22 16489.0 23 15728.0 24 16639.0 25 18787.0 26 22079.0 27 26985.0 28 32740.0 29 39950.0 30 49833.0 31 61478.0 32 76718.0 33 104193.0 34 246927.0 35 221296.0 36 196135.0 37 331390.0 38 447650.0 39 207163.0 40 828.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.22852272484557 23.970302802528725 28.86046979813922 13.940704674486486 2 31.021910249459552 25.1710879050315 31.027181833756956 12.779820011751998 3 29.049065270848097 25.029118686539327 32.615837384348936 13.30597865826364 4 27.340481177490155 27.010552711980175 31.423686773367777 14.225279337161897 5 23.640147113557653 31.182466347069294 30.431083805920263 14.746302733452794 6 22.297392792562704 40.91830998460788 26.587099069883486 10.19719815294593 7 88.37029425892659 3.5566833918282263 6.392841188524125 1.680181160721062 8 88.9198114772388 3.182219127943623 6.25464387948613 1.6433255153314488 9 84.47777459159991 5.916898926914483 7.447067158620609 2.158259322864997 10-11 39.24880832655829 28.66726168917012 19.817930385093778 12.265999599177814 12-13 30.51829217028853 25.18578926296435 27.397559710917225 16.898358855829894 14-15 17.28241194977271 31.140498173805042 34.40558569801002 17.171504178412224 16-17 23.145027191831588 26.179073900795146 31.219662827650552 19.456236079722714 18-19 24.547245892595104 28.46451019483503 29.666272358220514 17.321971554349354 20-21 26.882012400038718 28.27327892997745 28.99589498095186 15.848813689031967 22-23 22.761178599003763 23.88604834315469 32.040053133934144 21.31271992390741 24-25 21.009422048037766 26.774717481709647 33.187122610234056 19.028737860018534 26-27 18.57794923555211 33.0471075135073 29.253498218795286 19.121445032145303 28-29 17.370142928101497 29.000212226712662 34.58713724342495 19.042507601760892 30-31 22.745591069572644 28.33492465497254 30.507158220694876 18.412326054759944 32-33 25.910359435704166 27.71739945475458 28.384732037644568 17.987509071896685 34-35 20.068785086142686 28.115608570323612 30.659238883205774 21.15636746032792 36-37 23.3086053614739 29.277402126902487 28.948473444621325 18.46551906700229 38-39 20.435660086426715 31.51805267676054 27.564591677168178 20.48169555964457 40-41 21.035507301371474 26.992829282014764 28.653378335697216 23.318285080916546 42-43 20.570108208356643 26.823547803498972 28.650197207241884 23.956146780902504 44-45 19.692889314453186 30.143623405288945 28.505342250793802 21.658145029464066 46-47 21.106196520118136 29.439389732317128 28.326630998642564 21.127782748922165 48-49 21.14264316327778 27.412533737003386 30.443240261088846 21.001582838629986 50-51 19.55051109373104 30.544377423622244 29.080490275517533 20.824621207129184 52-53 22.0960500836864 27.01048454494185 29.68697241552627 21.206492955845484 54-55 21.833175261545566 27.67968036021281 29.793017604819315 20.694126773422308 56-57 21.878756287841227 26.585599395040255 29.457181329320868 22.078462987797646 58-59 23.290586541009063 27.802585530319107 28.28911640521578 20.61771152345605 60-61 24.21906704773556 29.06690231254405 27.164701107987042 19.54932953173335 62-63 22.943661760609178 26.493778394411756 29.82551055975591 20.737049285223158 64-65 20.551339550470193 29.29721601270997 29.99372408800455 20.157720348815282 66-67 19.696456722792377 29.6066943667214 26.569284750533633 24.12756415995259 68-69 18.71719177251114 31.359677924377305 26.759675288585154 23.163455014526395 70-71 19.61595145052641 30.036669322151514 29.120731550477462 21.226647676844614 72-73 22.117340921991005 30.184296404824956 27.081310097765165 20.617052575418874 74-75 20.847184496815917 31.6222119113265 25.927128527132982 21.603475064724602 76-77 24.03251658617654 28.24385349176565 26.954723907589127 20.76890601446868 78-79 19.5980007970999 29.640346161309573 28.873739648267172 21.88791339332336 80-81 18.22922938980957 28.664807675790293 29.89036013555243 23.215602798847705 82-83 19.254461646270332 27.793246646068106 30.85433294690197 22.0979587607596 84-85 18.168810671504406 27.280948630683255 29.075195968874024 25.475044728938318 86 18.970159651748233 27.69058708634537 29.460657848275623 23.87859541363077 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1351.0 1 1764.5 2 5154.0 3 5318.5 4 2888.5 5 3741.5 6 4537.5 7 4862.0 8 4911.5 9 5006.0 10 5024.0 11 4884.5 12 4751.5 13 4956.5 14 5182.0 15 5063.0 16 5111.0 17 5485.5 18 6395.0 19 6712.0 20 6987.0 21 7647.0 22 7762.5 23 8871.0 24 9604.0 25 12135.5 26 15902.0 27 19771.0 28 24082.5 29 25500.0 30 27978.5 31 33058.0 32 38717.5 33 42392.0 34 45316.0 35 49184.5 36 50745.0 37 55897.5 38 62077.0 39 69406.0 40 82980.5 41 91429.0 42 97802.0 43 102999.0 44 106856.5 45 113963.5 46 117067.5 47 121418.0 48 125899.0 49 115741.0 50 105598.0 51 94281.0 52 77288.0 53 68379.5 54 63877.5 55 62013.5 56 58027.5 57 54636.0 58 48198.0 59 35916.0 60 27134.0 61 21089.5 62 16202.5 63 12643.0 64 10864.0 65 9039.5 66 6222.5 67 4744.5 68 3450.5 69 2578.0 70 2088.5 71 1663.0 72 1166.0 73 478.5 74 277.5 75 220.5 76 129.0 77 73.0 78 95.0 79 128.0 80 80.5 81 31.0 82 24.0 83 16.5 84 12.0 85 7.5 86 5.0 87 3.5 88 2.5 89 3.0 90 1.5 91 0.5 92 0.5 93 0.0 94 0.0 95 0.5 96 0.5 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2200477.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.921395891626597 #Duplication Level Percentage of deduplicated Percentage of total 1 80.60115119539334 12.832828375027097 2 7.922901703355009 2.522873092591156 3 2.3601674289858297 1.127314800222177 4 1.1188495965052458 0.7125458947658679 5 0.6793427123178066 0.5408042134451597 6 0.5088995296418404 0.4861434528294183 7 0.39445146072575815 0.4396152506371638 8 0.29689969564113283 0.3781646075524736 9 0.262785582172964 0.37655219595485995 >10 2.719843953144392 10.392163524461333 >50 1.2449009178442028 14.539092727939066 >100 1.8791537516493384 53.56345662761706 >500 0.006333902640744782 0.630324410206063 >1k 0.004030665316837588 0.8890824129413715 >5k 0.0 0.0 >10k+ 2.879046654883992E-4 0.5690384138097642 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12414 0.5641504092067311 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.088938443801048E-5 0.0 0.0 0.0373100923118033 0.0 2 9.088938443801048E-5 0.0 0.0 0.1056589094091872 0.0 3 9.088938443801048E-5 0.0 0.0 0.1525578317792006 0.0 4 9.088938443801048E-5 0.0 0.0 0.22236087902759266 0.0 5 9.088938443801048E-5 0.0 0.0 0.3924149173111103 0.0 6 9.088938443801048E-5 0.0 0.0 0.5230229627485313 0.0 7 9.088938443801048E-5 0.0 0.0 0.6158210242597401 0.0 8 9.088938443801048E-5 0.0 0.0 0.823457823008375 0.0 9 9.088938443801048E-5 0.0 0.0 0.8903069652625317 0.0 10 9.088938443801048E-5 0.0 0.0 1.0199606721633536 0.0 11 9.088938443801048E-5 0.0 0.0 1.2709062625967007 0.0 12 9.088938443801048E-5 0.0 0.0 1.4515034694750275 0.0 13 9.088938443801048E-5 0.0 0.0 1.5185343904980602 0.0 14 9.088938443801048E-5 0.0 0.0 1.5476644382104425 0.0 15 9.088938443801048E-5 0.0 0.0 1.5964265929614352 0.0 16 9.088938443801048E-5 0.0 0.0 1.6885429840893589 0.0 17 9.088938443801048E-5 0.0 0.0 1.7956106789573352 0.0 18 9.088938443801048E-5 0.0 0.0 1.916175447414356 0.0 19 9.088938443801048E-5 0.0 0.0 2.003020254244875 0.0 20 9.088938443801048E-5 0.0 0.0 2.100771787207955 0.0 21 9.088938443801048E-5 0.0 0.0 2.2307436069543103 0.0 22 9.088938443801048E-5 0.0 0.0 2.367304907072421 0.0 23 9.088938443801048E-5 0.0 0.0 2.4990490698153174 0.0 24 9.088938443801048E-5 0.0 0.0 2.5964824899328645 0.0 25 9.088938443801048E-5 0.0 0.0 2.6933251290515647 0.0 26 9.088938443801048E-5 0.0 0.0 2.7888498720959136 0.0 27 9.088938443801048E-5 0.0 0.0 2.902098045105675 0.0 28 9.088938443801048E-5 0.0 0.0 3.010165523202469 0.0 29 9.088938443801048E-5 0.0 0.0 3.138410444644502 0.0 30 9.088938443801048E-5 0.0 0.0 3.282561008363187 0.0 31 9.088938443801048E-5 0.0 0.0 3.4106695957285624 0.0 32 9.088938443801048E-5 0.0 0.0 3.526917118424778 0.0 33 9.088938443801048E-5 0.0 0.0 3.6464821036529806 0.0 34 9.088938443801048E-5 0.0 0.0 3.774090799403947 0.0 35 9.088938443801048E-5 0.0 0.0 3.9303750959451063 0.0 36 1.3633407665701572E-4 0.0 0.0 4.061346698920279 0.0 37 1.3633407665701572E-4 0.0 0.0 4.2049519263323365 0.0 38 1.3633407665701572E-4 0.0 0.0 4.379686767914412 0.0 39 1.3633407665701572E-4 0.0 0.0 4.6834845353984615 0.0 40 1.3633407665701572E-4 0.0 0.0 4.8618549523580565 0.0 41 1.3633407665701572E-4 0.0 0.0 5.036498904555694 0.0 42 1.3633407665701572E-4 0.0 0.0 5.211779082444397 0.0 43 1.3633407665701572E-4 0.0 0.0 5.367699821447804 0.0 44 1.3633407665701572E-4 0.0 0.0 5.5258019056777234 0.0 45 1.3633407665701572E-4 0.0 0.0 5.678041624611391 0.0 46 1.3633407665701572E-4 0.0 0.0 5.848686443893755 0.0 47 1.3633407665701572E-4 0.0 0.0 6.027738531236636 0.0 48 1.3633407665701572E-4 0.0 0.0 6.216561227406603 0.0 49 1.3633407665701572E-4 0.0 0.0 6.397203878977149 0.0 50 1.3633407665701572E-4 0.0 0.0 6.584072453381698 0.0 51 1.3633407665701572E-4 0.0 0.0 6.774440269087112 0.0 52 1.3633407665701572E-4 0.0 0.0 7.012206898776947 0.0 53 1.3633407665701572E-4 0.0 0.0 7.213754108768235 0.0 54 1.3633407665701572E-4 0.0 0.0 7.419891232673643 0.0 55 1.3633407665701572E-4 0.0 0.0 7.619620654976171 0.0 56 1.3633407665701572E-4 0.0 0.0 7.826075891727112 4.544469221900524E-5 57 1.3633407665701572E-4 0.0 0.0 8.033758135167966 4.544469221900524E-5 58 1.3633407665701572E-4 0.0 0.0 8.235714347389225 4.544469221900524E-5 59 1.3633407665701572E-4 0.0 0.0 8.45066774158512 4.544469221900524E-5 60 1.8177876887602096E-4 0.0 0.0 8.68411712551415 4.544469221900524E-5 61 1.8177876887602096E-4 0.0 0.0 8.92165653174289 4.544469221900524E-5 62 1.8177876887602096E-4 0.0 0.0 9.200232495045393 4.544469221900524E-5 63 1.8177876887602096E-4 0.0 0.0 9.454495548010726 4.544469221900524E-5 64 1.8177876887602096E-4 0.0 0.0 9.698851658072318 4.544469221900524E-5 65 1.8177876887602096E-4 0.0 0.0 9.928892690084922 4.544469221900524E-5 66 1.8177876887602096E-4 0.0 0.0 10.146527321121738 4.544469221900524E-5 67 2.272234610950262E-4 0.0 0.0 10.388338528419066 4.544469221900524E-5 68 2.272234610950262E-4 0.0 0.0 10.678321109468538 4.544469221900524E-5 69 2.272234610950262E-4 0.0 0.0 11.098366399648803 4.544469221900524E-5 70 2.272234610950262E-4 0.0 0.0 11.36208194859569 4.544469221900524E-5 71 2.7266815331403145E-4 0.0 0.0 11.611709642954686 4.544469221900524E-5 72 3.181128455330367E-4 0.0 0.0 11.871607837755178 4.544469221900524E-5 73 3.181128455330367E-4 0.0 0.0 12.12591633541273 4.544469221900524E-5 74 3.181128455330367E-4 0.0 0.0 12.41830748514981 4.544469221900524E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTAAGG 225 0.0 69.333336 2 CGTTTTT 6145 0.0 69.25956 1 ACGGGAT 1230 0.0 67.31708 5 TAGGGAC 2585 0.0 66.38298 5 CGAGGGA 1420 0.0 65.633804 4 CGTTAGG 430 0.0 65.11628 2 TAGCACG 80 0.0 65.0 1 TAAGGGA 3355 0.0 63.666172 4 TAACGGG 715 0.0 63.216785 3 GGCGATT 380 0.0 63.157894 8 ATAGGGA 3485 0.0 62.898132 4 TACGGGA 1000 0.0 62.4 4 AGCCGTA 180 0.0 62.22222 80 GTACGGG 795 0.0 61.88679 3 CACGGGA 590 0.0 61.694916 4 CGGGATC 740 0.0 61.62162 6 CCGATCC 2060 0.0 60.582523 80 GCGCGAC 40 2.977249E-7 60.0 9 TAGGGAG 3030 0.0 59.933994 5 TAGCGGG 1290 0.0 59.844963 3 >>END_MODULE