##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547797_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3236639 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.71993262146319 31.0 31.0 33.0 30.0 34.0 2 32.15683893075502 33.0 31.0 34.0 30.0 34.0 3 32.317189220052036 34.0 31.0 34.0 30.0 34.0 4 35.9152698215649 37.0 35.0 37.0 35.0 37.0 5 35.84794751592624 37.0 35.0 37.0 35.0 37.0 6 35.90892156956645 37.0 35.0 37.0 35.0 37.0 7 36.2140074935759 37.0 35.0 37.0 35.0 37.0 8 36.18026044918818 37.0 35.0 37.0 35.0 37.0 9 38.049611340653065 39.0 39.0 39.0 35.0 39.0 10-11 37.44651519678284 39.0 37.0 39.0 34.5 39.0 12-13 36.79956213837873 39.0 35.0 39.0 33.0 39.0 14-15 37.9071133666745 40.0 36.0 41.0 33.0 41.0 16-17 38.03959215099367 40.0 36.0 41.0 33.0 41.0 18-19 37.93899474114969 40.0 36.0 41.0 33.5 41.0 20-21 37.7819640991782 40.0 35.0 41.0 33.0 41.0 22-23 37.5758949329845 39.5 35.0 41.0 33.0 41.0 24-25 37.499802881940184 39.0 35.0 41.0 33.0 41.0 26-27 37.4761830095973 39.5 35.0 41.0 33.0 41.0 28-29 37.4745319141245 40.0 35.0 41.0 33.0 41.0 30-31 37.33102718591724 39.0 35.0 41.0 33.0 41.0 32-33 37.06803878962096 39.0 35.0 41.0 32.0 41.0 34-35 36.839570616309075 39.0 35.0 41.0 31.0 41.0 36-37 36.67417419736955 39.0 35.0 41.0 31.0 41.0 38-39 36.5797923401405 39.0 35.0 41.0 31.0 41.0 40-41 36.46444815130758 39.0 35.0 41.0 30.0 41.0 42-43 36.41228647989473 39.0 35.0 41.0 30.0 41.0 44-45 36.31701990861508 39.0 35.0 41.0 30.0 41.0 46-47 36.23517806588872 38.5 35.0 41.0 30.0 41.0 48-49 36.12018408602257 38.0 35.0 40.5 30.0 41.0 50-51 35.96079312521415 38.0 35.0 40.0 30.0 41.0 52-53 35.7758877341588 38.0 35.0 40.0 29.0 41.0 54-55 35.59026415982753 37.5 35.0 40.0 29.0 41.0 56-57 35.30924193275803 37.0 34.5 40.0 28.0 41.0 58-59 35.01982998412859 36.5 34.0 40.0 27.5 41.0 60-61 34.7168036039855 36.0 34.0 39.5 26.5 41.0 62-63 34.32489721590824 35.5 33.5 39.0 26.0 41.0 64-65 34.01009102343511 35.0 33.0 39.0 26.0 40.0 66-67 33.68945486351737 35.0 33.0 38.5 25.5 40.0 68-69 33.25352024121318 35.0 33.0 37.5 24.0 40.0 70-71 32.9689866556017 35.0 33.0 37.0 24.0 39.0 72-73 32.692341808894966 35.0 33.0 36.5 24.0 39.0 74-75 32.35828277419879 35.0 32.5 36.0 22.5 38.5 76-77 30.257489945588617 33.0 29.5 34.5 19.5 36.0 78-79 31.4009761360473 34.0 31.0 35.0 20.0 37.0 80-81 31.578903455096473 35.0 32.0 35.0 20.0 37.0 82-83 31.39045102033313 35.0 32.0 35.0 19.5 36.0 84-85 31.163580800948147 34.0 32.0 35.0 19.0 36.0 86 30.714168617507234 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 10.0 9 11.0 10 21.0 11 36.0 12 64.0 13 146.0 14 444.0 15 1164.0 16 2993.0 17 6371.0 18 11629.0 19 17774.0 20 21592.0 21 22550.0 22 21834.0 23 22265.0 24 23985.0 25 28008.0 26 33498.0 27 41356.0 28 49710.0 29 61504.0 30 75926.0 31 92763.0 32 113354.0 33 146860.0 34 323428.0 35 313791.0 36 281820.0 37 479962.0 38 691245.0 39 349228.0 40 1296.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.50632492533149 23.65870892614221 31.90911930555122 12.925846842975075 2 29.1600947773292 25.492493911122 32.429443011716785 12.917968299832017 3 28.424424225253418 25.47661323984541 33.04378399938949 13.055178535511683 4 27.198399327203308 27.007120658188942 31.512040731141163 14.282439283466584 5 23.804322941174473 32.11300364359448 29.625299577740982 14.457373837490062 6 22.628658926744688 40.77643506118538 25.76382475771935 10.831081254350577 7 89.22567515252705 3.5590623483187347 5.589069401932066 1.6261930972221492 8 90.21435507636161 2.760085384869922 5.452137232480978 1.573422306287479 9 85.89598654653794 5.414505602880024 6.530323585670198 2.159184264911842 10-11 37.50192715344529 31.013977771385687 20.0622930144511 11.421802060717924 12-13 28.352065213327776 26.546565743043942 27.72113294068322 17.380236102945062 14-15 15.751308687808557 32.43753782859318 34.148989121122256 17.662164362476013 16-17 21.326922773902186 27.73046360746441 31.77799563065266 19.16461798798074 18-19 22.853320991312284 29.084460763155857 30.108841301115135 17.953376944416725 20-21 25.736497026699613 28.069503580720617 29.59872880478793 16.59527058779184 22-23 21.19023777443206 25.115945893255322 32.28809267885606 21.405723653456565 24-25 19.109406393484104 28.36080885140419 33.762847818369615 18.766936936742095 26-27 17.905904859948855 34.461890868892084 29.054074303621753 18.57812996753731 28-29 16.419192872606427 29.586370305739994 35.202489372463226 18.79194744919035 30-31 21.630478406767022 29.27325228423683 30.736606708378662 18.359662600617494 32-33 23.277495574884934 29.087735765403554 29.044481018735794 18.590287640975717 34-35 19.001748418652806 29.100001575708628 30.86026893947703 21.037981066161535 36-37 21.687682809235135 29.920018883786547 30.52050290440176 17.871795402576563 38-39 19.446453558768834 30.7678273665985 29.448990140698424 20.336728933934246 40-41 20.48676111237614 27.87595403750619 29.618471507017002 22.018813343100668 42-43 20.74754089041132 27.444626972609548 29.263937065579448 22.54389507139968 44-45 18.532357176688535 31.39083475172857 29.299807609066068 20.777000462516824 46-47 20.248551043227252 30.08298114185734 29.377233605601365 20.291234209314045 48-49 20.24448818666524 27.708990715368625 31.482905569635662 20.56361552833047 50-51 18.620844029871726 30.621626322861463 29.867309885347115 20.890219761919695 52-53 21.073666232162438 27.23723591046144 30.331386972720775 21.357710884655347 54-55 20.85475086965213 28.007293986138087 31.000383422432964 20.13757172177682 56-57 20.824240825127546 26.504485053785732 30.441377614247372 22.229896506839346 58-59 21.63743006248148 28.13517355503657 29.765506749439773 20.461889633042176 60-61 22.367106742519013 29.474062445641913 28.39850227350038 19.76032853833869 62-63 21.045241684352195 27.604484157794552 30.986093907908792 20.364180249944464 64-65 19.30714237825102 30.523654321658984 30.723058703797363 19.446144596292637 66-67 17.885899539615014 30.087399305266977 27.864553322134473 24.162147832983536 68-69 18.027095391237637 31.47785403314982 27.462639484971913 23.032411090640633 70-71 18.302612679387476 30.283003448948122 29.79003837004992 21.624345501614485 72-73 21.23753992953802 30.262179378052355 28.144689599303476 20.355591093106153 74-75 20.28159458005666 31.638221006420547 26.657313342637224 21.42287107088557 76-77 22.971282864724795 28.84458229663549 27.787513528694426 20.39662130994529 78-79 18.051503426857305 30.364121547073985 30.116271848667708 21.468103177401 80-81 16.818681354330835 29.150903143662298 30.93727783666946 23.09313766533741 82-83 18.673444891444486 28.188902129647452 31.00285512224255 22.13479785666551 84-85 16.766822002700952 28.148103634665468 30.231545748537293 24.85352861409629 86 18.06355296342904 28.38296146094761 30.824784599085657 22.7287009765377 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2087.0 1 2560.5 2 6776.5 3 6905.0 4 3741.5 5 5063.0 6 6864.0 7 7794.0 8 8435.0 9 9118.5 10 9131.0 11 8626.0 12 7957.0 13 7637.5 14 7512.0 15 7538.5 16 7522.5 17 7450.0 18 7691.0 19 7644.5 20 8569.0 21 9811.0 22 9999.0 23 11815.0 24 15296.0 25 21861.5 26 29325.0 27 36467.5 28 41063.0 29 41267.0 30 45736.0 31 55029.0 32 63790.5 33 71293.0 34 80643.5 35 90572.0 36 94715.0 37 92980.0 38 101013.5 39 123170.0 40 138433.5 41 148920.0 42 161108.5 43 165686.0 44 177275.5 45 183588.5 46 180514.5 47 182636.0 48 177991.5 49 159154.0 50 144880.0 51 129399.0 52 106948.5 53 92963.0 54 79098.5 55 67356.5 56 59450.0 57 56437.0 58 50141.0 59 36877.5 60 24910.0 61 18211.5 62 14331.5 63 9864.0 64 7578.0 65 6297.5 66 3969.0 67 2600.0 68 1692.5 69 855.5 70 605.0 71 605.0 72 487.5 73 232.5 74 100.5 75 99.0 76 62.5 77 36.0 78 30.0 79 21.0 80 18.5 81 12.5 82 8.5 83 8.0 84 7.0 85 5.5 86 5.0 87 3.0 88 2.0 89 3.0 90 1.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3236639.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.431385451759589 #Duplication Level Percentage of deduplicated Percentage of total 1 77.97431712027574 12.032517428207118 2 9.747998668274988 3.0085024966678104 3 3.2097624248213883 1.4859324355798007 4 1.5188746466625511 0.9375336050221992 5 0.8959029536195309 0.6912511902336438 6 0.5998730171862516 0.5554123050186631 7 0.4507558973067859 0.4869051597196342 8 0.34870340995884913 0.43047813819343556 9 0.2672825638385675 0.37120862404147265 >10 2.283163821440931 7.662975007499899 >50 0.8035436116041079 9.165127462556267 >100 1.886677808105988 60.8695249245757 >500 0.009301947963014874 0.8917387276314535 >1k 0.0036398926811797333 0.9316808339186167 >5k 0.0 0.0 >10k+ 2.022162600655407E-4 0.4792116611343469 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15357 0.4744736746977343 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3944 0.1218548006126108 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.268874285949097E-5 0.0 0.0 0.06151442901108217 0.0 2 9.268874285949097E-5 0.0 0.0 0.19291617013822054 0.0 3 9.268874285949097E-5 0.0 0.0 0.27899311600706783 0.0 4 9.268874285949097E-5 0.0 0.0 0.4210231663154278 0.0 5 9.268874285949097E-5 0.0 0.0 0.7217672406468562 0.0 6 9.268874285949097E-5 0.0 0.0 0.9484839056811711 0.0 7 9.268874285949097E-5 0.0 0.0 1.1103493469614623 0.0 8 9.268874285949097E-5 0.0 0.0 1.4363974480935315 0.0 9 9.268874285949097E-5 0.0 0.0 1.5344312417912531 0.0 10 9.268874285949097E-5 0.0 0.0 1.7336193501962993 0.0 11 9.268874285949097E-5 0.0 0.0 2.075455433862102 0.0 12 9.268874285949097E-5 0.0 0.0 2.3176820152015716 0.0 13 9.268874285949097E-5 0.0 0.0 2.402677592403725 0.0 14 9.268874285949097E-5 0.0 0.0 2.4378684184427115 0.0 15 9.268874285949097E-5 0.0 0.0 2.5004642161204877 0.0 16 9.268874285949097E-5 0.0 0.0 2.632452985952403 0.0 17 9.268874285949097E-5 0.0 0.0 2.8222795313286406 0.0 18 9.268874285949097E-5 0.0 0.0 3.025236981943306 0.0 19 9.268874285949097E-5 0.0 0.0 3.174929301661384 0.0 20 9.268874285949097E-5 0.0 0.0 3.32496148010328 0.0 21 9.268874285949097E-5 0.0 0.0 3.500513959079156 0.0 22 9.268874285949097E-5 0.0 0.0 3.710083206684465 0.0 23 9.268874285949097E-5 0.0 0.0 3.919096321832617 0.0 24 9.268874285949097E-5 0.0 0.0 4.0723726062745955 0.0 25 9.268874285949097E-5 0.0 0.0 4.209582841954262 0.0 26 9.268874285949097E-5 0.0 0.0 4.34101547932902 0.0 27 9.268874285949097E-5 0.0 0.0 4.4831382183802395 0.0 28 9.268874285949097E-5 0.0 0.0 4.637217805260334 0.0 29 9.268874285949097E-5 0.0 0.0 4.822533498484075 0.0 30 9.268874285949097E-5 0.0 0.0 5.024440476679667 0.0 31 9.268874285949097E-5 0.0 0.0 5.208149565027178 0.0 32 9.268874285949097E-5 0.0 0.0 5.37335180105041 0.0 33 9.268874285949097E-5 0.0 0.0 5.544980456578568 0.0 34 1.235849904793213E-4 0.0 0.0 5.733694737040492 0.0 35 1.235849904793213E-4 0.0 0.0 5.944129079579156 0.0 36 1.235849904793213E-4 0.0 0.0 6.137168834707856 0.0 37 1.235849904793213E-4 0.0 0.0 6.335306470693828 0.0 38 1.235849904793213E-4 0.0 0.0 6.537831373841816 0.0 39 1.5448123809915163E-4 0.0 0.0 6.79189121801968 0.0 40 1.8537748571898193E-4 0.0 0.0 7.036342329187778 0.0 41 2.471699809586426E-4 0.0 0.0 7.266333996469795 0.0 42 2.780662285784729E-4 0.0 0.0 7.491598537865977 0.0 43 2.780662285784729E-4 0.0 0.0 7.719303882824127 0.0 44 2.780662285784729E-4 0.0 0.0 7.94277644185836 0.0 45 2.780662285784729E-4 0.0 0.0 8.16856621946408 0.0 46 2.780662285784729E-4 0.0 0.0 8.414654831756028 0.0 47 2.780662285784729E-4 0.0 0.0 8.664852644981414 0.0 48 2.780662285784729E-4 0.0 0.0 8.921415085216486 0.0 49 2.780662285784729E-4 0.0 0.0 9.187493569718464 0.0 50 2.780662285784729E-4 0.0 0.0 9.45953503001107 0.0 51 3.0896247619830326E-4 0.0 0.0 9.72552082577019 0.0 52 3.0896247619830326E-4 0.0 0.0 10.020610886787189 0.0 53 3.0896247619830326E-4 0.0 0.0 10.305505186089643 0.0 54 3.0896247619830326E-4 0.0 0.0 10.592932977696925 0.0 55 3.0896247619830326E-4 0.0 0.0 10.87603529463743 0.0 56 3.0896247619830326E-4 0.0 0.0 11.171156251902051 0.0 57 3.0896247619830326E-4 0.0 0.0 11.46260055569991 0.0 58 3.0896247619830326E-4 0.0 0.0 11.744034475268943 0.0 59 3.0896247619830326E-4 0.0 0.0 12.046230673238504 0.0 60 3.0896247619830326E-4 0.0 0.0 12.347963427493767 0.0 61 3.0896247619830326E-4 0.0 0.0 12.66075703839693 0.0 62 3.0896247619830326E-4 0.0 0.0 12.99925632731979 0.0 63 3.0896247619830326E-4 0.0 0.0 13.360649735728947 0.0 64 3.0896247619830326E-4 0.0 0.0 13.698747373432749 0.0 65 3.0896247619830326E-4 0.0 0.0 14.025073540793397 0.0 66 3.398587238181336E-4 0.0 0.0 14.332491204610708 0.0 67 3.398587238181336E-4 0.0 0.0 14.653008877418829 0.0 68 3.398587238181336E-4 0.0 0.0 14.988820192798764 0.0 69 3.7075497143796386E-4 0.0 0.0 15.374528948084727 0.0 70 3.7075497143796386E-4 0.0 0.0 15.713677058207603 0.0 71 3.7075497143796386E-4 0.0 0.0 16.06366975124504 0.0 72 4.016512190577942E-4 0.0 0.0 16.41570159662539 0.0 73 4.325474666776245E-4 0.0 0.0 16.755653009186382 0.0 74 4.325474666776245E-4 0.0 0.0 17.108828015728662 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTCGACG 55 0.0 72.72727 1 CGAGGGA 2865 0.0 69.38918 4 CGTTAGG 530 0.0 68.679245 2 CGATAGG 530 0.0 68.679245 2 CAACGCG 105 0.0 68.571434 1 CGTTTTT 8115 0.0 68.02218 1 GTTTGCG 265 0.0 67.92452 1 AGGGATT 7745 0.0 67.34667 6 ACGGGAT 2035 0.0 67.22359 5 TAGGGAC 4375 0.0 66.10286 5 TACGGGA 1780 0.0 65.8427 4 TTAGGGA 5175 0.0 64.77295 4 AGCGGGA 2480 0.0 63.870968 4 CGGGATA 1005 0.0 63.68159 6 CGGGACG 145 0.0 63.44828 6 CGTAGGG 1690 0.0 63.431953 3 ACGTAGG 790 0.0 63.29114 2 GGGACCG 1645 0.0 63.22189 7 AGGGATG 6115 0.0 62.992638 6 TAAGGGA 5490 0.0 62.36794 4 >>END_MODULE