##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547796_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2135665 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.864578948477405 31.0 31.0 33.0 30.0 34.0 2 32.31563798629467 33.0 31.0 34.0 31.0 34.0 3 32.45275406021075 34.0 31.0 34.0 31.0 34.0 4 36.02721962480071 37.0 35.0 37.0 35.0 37.0 5 35.9745390779921 37.0 35.0 37.0 35.0 37.0 6 36.02939037723613 37.0 35.0 37.0 35.0 37.0 7 36.24238539284017 37.0 35.0 37.0 35.0 37.0 8 36.19340205509759 37.0 36.0 37.0 35.0 37.0 9 38.01459498563679 39.0 39.0 39.0 35.0 39.0 10-11 37.60573521596318 39.0 37.5 39.0 35.0 39.0 12-13 36.59407982993588 39.0 35.0 39.0 33.0 39.0 14-15 37.64090505767524 40.0 35.0 41.0 33.0 41.0 16-17 37.82363409055259 40.0 35.0 41.0 34.0 41.0 18-19 37.70942914736159 39.0 36.0 41.0 34.0 41.0 20-21 37.49160308381698 39.0 35.0 41.0 33.5 41.0 22-23 37.29998829404424 39.0 35.0 41.0 33.0 41.0 24-25 37.23060217777601 39.0 35.0 41.0 33.0 41.0 26-27 37.185965963763046 39.0 35.0 41.0 33.0 41.0 28-29 37.19819025924009 39.0 35.0 41.0 33.0 41.0 30-31 37.04093877082782 39.0 35.0 41.0 33.0 41.0 32-33 36.70146394682686 38.5 35.0 41.0 32.0 41.0 34-35 36.45494564924742 38.0 35.0 41.0 31.0 41.0 36-37 36.25327778467128 38.0 35.0 41.0 31.0 41.0 38-39 36.19282752678908 38.0 35.0 41.0 31.0 41.0 40-41 36.04131546848406 38.0 35.0 41.0 30.0 41.0 42-43 36.03455012841434 38.0 35.0 41.0 30.0 41.0 44-45 35.917691679172535 38.0 35.0 41.0 30.0 41.0 46-47 35.83565212708922 38.0 35.0 40.5 30.0 41.0 48-49 35.74681539473653 37.5 35.0 40.0 30.0 41.0 50-51 35.60313672790443 37.0 35.0 40.0 29.5 41.0 52-53 35.42576246742817 37.0 35.0 40.0 29.0 41.0 54-55 35.25981064445969 36.5 35.0 40.0 29.0 41.0 56-57 34.98368915536847 36.0 34.0 40.0 28.5 41.0 58-59 34.695655451580656 36.0 34.0 40.0 27.0 41.0 60-61 34.40017137519227 35.0 34.0 39.0 26.5 41.0 62-63 33.95077271013946 35.0 33.5 39.0 26.0 41.0 64-65 33.720743421838165 35.0 33.0 38.5 26.0 40.0 66-67 33.47691983527379 35.0 33.0 38.0 25.0 40.0 68-69 33.13400907913928 35.0 33.0 37.0 24.5 40.0 70-71 32.89531457414904 35.0 33.0 36.5 24.0 39.0 72-73 32.65372799572967 35.0 33.0 36.0 24.0 39.0 74-75 32.36807949748673 35.0 33.0 36.0 23.5 38.0 76-77 30.31770315100917 33.0 29.5 34.5 19.5 36.0 78-79 31.353945024149386 34.0 31.5 35.0 20.0 37.0 80-81 31.72153778799578 35.0 32.0 35.0 21.5 36.5 82-83 31.61227814287353 35.0 32.0 35.0 20.0 36.0 84-85 31.399583267975082 35.0 32.0 35.0 20.0 36.0 86 30.981339301809975 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 4.0 9 23.0 10 39.0 11 35.0 12 65.0 13 118.0 14 387.0 15 1059.0 16 2413.0 17 5356.0 18 9685.0 19 14426.0 20 17340.0 21 18131.0 22 16178.0 23 15131.0 24 15800.0 25 17103.0 26 19765.0 27 23808.0 28 29123.0 29 36262.0 30 45799.0 31 57795.0 32 72687.0 33 100067.0 34 275202.0 35 250636.0 36 161709.0 37 295775.0 38 416138.0 39 216874.0 40 732.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.008889502801235 26.061203419075557 29.07515925952806 13.854747818595145 2 30.52866437386013 27.325680759857 28.368213179501467 13.7774416867814 3 30.06913537469594 24.74264456270061 31.513416195892148 13.674803866711304 4 27.143957502698225 27.684632187164187 30.618051052014245 14.553359258123347 5 25.26805468086053 32.065750012291254 28.553260928094996 14.112934378753222 6 22.383941301655454 41.58283251352623 25.519779553441204 10.513446631377112 7 85.6911079218885 5.650792610264251 6.76421629796808 1.8938831698791712 8 86.35675539000732 5.22052850049048 6.522933137921911 1.8997829715802808 9 80.30159224410195 9.043272236048256 7.860408818798828 2.7947267010509607 10-11 43.82117513748645 28.71639512751298 17.90634298918604 9.556086745814534 12-13 32.439872358258434 29.473302226706906 23.465337494410406 14.621487920624254 14-15 15.102532466468292 35.367812835814604 34.536338798453876 14.993315899263226 16-17 18.16736239063711 25.90090206095057 34.33825061514798 21.593484933264346 18-19 23.777277803400814 29.45321480662932 29.36506895978536 17.40443843018451 20-21 26.55491380904777 29.19671390410013 27.51452123811553 16.733851048736575 22-23 21.128898961213487 28.023870784977984 28.234460929031474 22.61276932477706 24-25 18.700334556215513 28.349670945583693 34.6430034673041 18.3069910308967 26-27 16.58787778045714 37.92881842423788 28.237293770324467 17.24601002498051 28-29 15.335644869396653 31.361426066354042 36.19963805184802 17.10329101240129 30-31 23.348933470371055 31.639138160713408 27.857388682213735 17.1545396867018 32-33 26.723994633989882 31.76521130420735 25.47056771544226 16.0402263463605 34-35 19.371156056778567 31.201148120140566 28.673504505622372 20.754191317458496 36-37 22.966968134047242 32.961161979992184 27.946892419925412 16.12497746603517 38-39 19.31964985145142 34.31444070113992 26.808441398814892 19.557468048593762 40-41 20.10537701371704 29.38548414662412 28.076758293084353 22.43238054657449 42-43 21.045107729910825 28.3271018628858 27.146766932079704 23.481023475123674 44-45 18.025486206872333 36.31618254735645 25.938361119370313 19.71997012640091 46-47 20.51611558928952 33.77720756766628 26.11739200670517 19.589284836339033 48-49 20.649282541971704 28.566067243692245 30.933011497589746 19.851638716746304 50-51 17.96892302865852 34.01572812215399 27.611680670891737 20.403668178295753 52-53 21.8664209976752 28.27629801490402 29.68283883474234 20.17444215267844 54-55 21.854785277653566 29.344934715884747 30.061105089047206 18.739174917414484 56-57 23.488819641657283 27.371989520828404 27.735670154261083 21.403520683253223 58-59 23.93104723821386 29.528905516548708 27.04637665551479 19.49367058972264 60-61 24.464300346730408 31.285758768346163 25.92824717359698 18.321693711326446 62-63 23.424811475582548 27.296017867970868 31.07470038606242 18.204470270384164 64-65 18.885850543039286 33.32968887910791 29.819938988558597 17.9645215892942 66-67 18.76296141951102 30.52791519269174 24.784083646077452 25.92503974171979 68-69 17.25930799071952 35.673291457227606 23.8007833625592 23.266617189493672 70-71 19.770680326736638 31.773475708971212 28.70681965570443 19.749024308587725 72-73 22.705035668047188 33.851821329656104 24.71862394148895 18.724519060807758 74-75 21.06109806547375 34.85471738311018 23.33570574036658 20.748478811049488 76-77 26.587456366049917 29.727485349996368 24.91600976744948 18.769048516504228 78-79 18.5183537680301 32.14949441977089 29.506195962381742 19.82595584981727 80-81 15.737861509178641 30.39392882310662 30.48582057579255 23.38238909192219 82-83 18.601161699049243 29.35987151542962 30.437521802342598 21.601444983178542 84-85 16.50558491149127 28.76556014168889 28.43959609770259 26.289258849117253 86 17.883703670753608 28.430442040301262 30.964125927989645 22.72172836095549 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2351.0 1 2504.0 2 5325.0 3 5738.0 4 3707.0 5 4391.5 6 5296.0 7 5740.0 8 5709.5 9 5717.0 10 5494.5 11 5169.5 12 4992.0 13 4953.0 14 5027.0 15 5007.5 16 5250.0 17 5910.0 18 6253.0 19 6281.5 20 6812.5 21 7260.0 22 7067.0 23 7252.5 24 9142.5 25 11448.0 26 21185.5 27 30307.5 28 39883.0 29 49280.0 30 50515.0 31 51739.5 32 47308.5 33 42467.5 34 45904.5 35 52607.5 36 55453.0 37 58094.0 38 61151.0 39 65037.5 40 74724.0 41 90521.0 42 105279.0 43 110456.0 44 114307.5 45 115922.5 46 119814.5 47 130067.5 48 121657.0 49 93478.5 50 77835.0 51 68830.5 52 55911.5 53 52084.5 54 48825.0 55 46088.5 56 43043.5 57 39388.0 58 36239.0 59 26897.0 60 19239.0 61 18407.5 62 18706.5 63 15748.5 64 13125.0 65 9721.5 66 4591.0 67 2547.0 68 1925.0 69 1254.5 70 975.0 71 1061.0 72 826.0 73 451.0 74 294.5 75 174.5 76 51.5 77 36.0 78 88.5 79 137.0 80 83.0 81 20.5 82 9.0 83 4.5 84 5.5 85 5.5 86 3.0 87 2.0 88 2.0 89 1.5 90 1.5 91 1.5 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2135665.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 13.638611284002899 #Duplication Level Percentage of deduplicated Percentage of total 1 80.64929760999568 10.99944420430595 2 9.12063362150807 2.487855532551124 3 2.6393508624119417 1.0799124136360287 4 1.1698177155028284 0.6381875637953347 5 0.6576201029638918 0.44845124784352414 6 0.4491001390681682 0.36750613346054334 7 0.3339450448143517 0.318818265950931 8 0.26515422341931644 0.2893068306822172 9 0.20866598173352952 0.25613227917526127 >10 1.7829858152520144 5.273261797314339 >50 0.6998659299047164 7.102948141720318 >100 1.9623894875405505 62.65888323651123 >500 0.051496307439862964 4.304059980731076 >1k 0.008294707238635644 2.2489903603180497 >5k 0.0010368384048294555 1.003542185847822 >10k+ 3.4561280160981853E-4 0.522699826156247 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11089 0.5192293735206599 No Hit AAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 7819 0.36611547222996116 No Hit AAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 7175 0.33596093020206824 No Hit AAGGAAGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 6296 0.2948027897633758 No Hit GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGA 4479 0.209723903327535 No Hit GAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA 4155 0.19455298466753915 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3774 0.17671310809513663 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 3194 0.1495552907408231 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2958 0.138504868506999 No Hit GTGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAA 2573 0.12047769664249777 No Hit AGGAAGGAAGGAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAG 2505 0.11729367667681963 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.8729529209871398E-4 0.0 0.0 0.02668957912406674 0.0 2 1.8729529209871398E-4 0.0 0.0 0.11752779579194303 0.0 3 1.8729529209871398E-4 0.0 0.0 0.18584375358494895 0.0 4 1.8729529209871398E-4 0.0 0.0 0.294194080064055 0.0 5 1.8729529209871398E-4 0.0 0.0 0.5012958493022079 0.0 6 1.8729529209871398E-4 0.0 0.0 0.6685505451463596 0.0 7 1.8729529209871398E-4 0.0 0.0 0.7685662311270728 0.0 8 1.8729529209871398E-4 0.0 0.0 0.9512727885693684 0.0 9 1.8729529209871398E-4 0.0 0.0 1.017903088733486 0.0 10 1.8729529209871398E-4 0.0 0.0 1.1454980064757347 0.0 11 1.8729529209871398E-4 0.0 0.0 1.382286079511534 0.0 12 1.8729529209871398E-4 0.0 0.0 1.5508986662234012 0.0 13 1.8729529209871398E-4 0.0 0.0 1.6180440284407902 0.0 14 1.8729529209871398E-4 0.0 0.0 1.6461383222555972 0.0 15 1.8729529209871398E-4 0.0 0.0 1.6870155197561416 0.0 16 1.8729529209871398E-4 0.0 0.0 1.7785092699463634 0.0 17 1.8729529209871398E-4 0.0 0.0 1.879648727679669 0.0 18 1.8729529209871398E-4 0.0 0.0 2.0028890298806226 0.0 19 1.8729529209871398E-4 0.0 0.0 2.079305509056898 0.0 20 1.8729529209871398E-4 0.0 0.0 2.1642439240236646 0.0 21 1.8729529209871398E-4 0.0 0.0 2.265617500872094 0.0 22 1.8729529209871398E-4 0.0 0.0 2.3703623929782993 0.0 23 1.8729529209871398E-4 0.0 0.0 2.481568972661911 0.0 24 1.8729529209871398E-4 0.0 0.0 2.5638852535392957 0.0 25 1.8729529209871398E-4 0.0 0.0 2.63318451161582 0.0 26 1.8729529209871398E-4 0.0 0.0 2.70234329822327 0.0 27 1.8729529209871398E-4 0.0 0.0 2.7762312909562126 0.0 28 1.8729529209871398E-4 0.0 0.0 2.8617784156223003 0.0 29 1.8729529209871398E-4 0.0 0.0 2.9514460367145596 0.0 30 1.8729529209871398E-4 0.0 0.0 3.052725965916939 0.0 31 1.8729529209871398E-4 0.0 0.0 3.158500982129688 0.0 32 1.8729529209871398E-4 0.0 0.0 3.252242275825094 0.0 33 1.8729529209871398E-4 0.0 0.0 3.3455153312902537 0.0 34 1.8729529209871398E-4 0.0 0.0 3.4432834737657827 0.0 35 1.8729529209871398E-4 0.0 0.0 3.5651658850990207 0.0 36 1.8729529209871398E-4 0.0 0.0 3.6678973528151655 0.0 37 2.3411911512339248E-4 0.0 0.0 3.7757326172409997 0.0 38 2.3411911512339248E-4 0.0 0.0 3.8886248545534996 0.0 39 2.3411911512339248E-4 0.0 0.0 4.02984550479593 0.0 40 2.3411911512339248E-4 0.0 0.0 4.171440745622558 0.0 41 2.3411911512339248E-4 0.0 0.0 4.303905340959373 0.0 42 2.3411911512339248E-4 0.0 0.0 4.450323435557543 0.0 43 2.3411911512339248E-4 0.0 0.0 4.563262496693068 0.0 44 2.3411911512339248E-4 0.0 0.0 4.690951062081366 0.0 45 2.8094293814807095E-4 0.0 0.0 4.817890446301269 0.0 46 2.8094293814807095E-4 0.0 0.0 4.968101270564437 0.0 47 2.8094293814807095E-4 0.0 0.0 5.137931276674947 0.0 48 2.8094293814807095E-4 0.0 0.0 5.271285524649231 0.0 49 2.8094293814807095E-4 0.0 0.0 5.418031386008574 0.0 50 2.8094293814807095E-4 0.0 0.0 5.564496304429768 0.0 51 2.8094293814807095E-4 0.0 0.0 5.716111843383676 0.0 52 2.8094293814807095E-4 0.0 0.0 5.896711328789862 0.0 53 2.8094293814807095E-4 0.0 0.0 6.052494187992967 0.0 54 2.8094293814807095E-4 0.0 0.0 6.222136898811377 0.0 55 2.8094293814807095E-4 0.0 0.0 6.38700357968127 0.0 56 2.8094293814807095E-4 0.0 0.0 6.560251724872581 0.0 57 2.8094293814807095E-4 0.0 0.0 6.733827636825064 0.0 58 2.8094293814807095E-4 0.0 0.0 6.898834789164031 0.0 59 2.8094293814807095E-4 0.0 0.0 7.07817003134855 0.0 60 2.8094293814807095E-4 0.0 0.0 7.259893288507326 0.0 61 2.8094293814807095E-4 0.0 0.0 7.45177731526246 0.0 62 2.8094293814807095E-4 0.0 0.0 7.667260548822029 0.0 63 2.8094293814807095E-4 0.0 0.0 7.88934594142808 0.0 64 2.8094293814807095E-4 0.0 0.0 8.091437561602593 0.0 65 2.8094293814807095E-4 0.0 0.0 8.279856625453899 0.0 66 3.2776676117274946E-4 0.0 0.0 8.466870974614464 0.0 67 3.2776676117274946E-4 0.0 0.0 8.660955721051756 0.0 68 3.2776676117274946E-4 0.0 0.0 8.891235282687125 0.0 69 3.2776676117274946E-4 0.0 0.0 9.139635663833046 0.0 70 3.7459058419742796E-4 0.0 0.0 9.340182097847743 0.0 71 4.2141440722210646E-4 0.0 0.0 9.544755380642563 0.0 72 4.2141440722210646E-4 0.0 0.0 9.764920996504602 0.0 73 4.2141440722210646E-4 0.0 0.0 9.979608225072752 0.0 74 4.2141440722210646E-4 0.0 0.0 10.224356348022747 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACTACCG 25 1.2851851E-6 80.0 1 TGTCGCG 85 0.0 75.29412 1 TTACGGG 565 0.0 75.04424 3 GCGTAAG 160 0.0 75.0 1 TACGGGA 795 0.0 72.45283 4 AATACGG 200 0.0 72.0 2 GCATGCG 85 0.0 70.58824 1 CGAAACG 645 0.0 70.07752 80 TCGCGTG 40 3.7161954E-9 70.0 1 ATAGCGG 435 0.0 69.885056 2 ACGGGAT 580 0.0 69.65517 5 ACGCGAG 250 0.0 68.8 1 TAACGCG 70 0.0 68.57143 1 GCGACGG 100 0.0 68.0 2 CGTAAGG 360 0.0 67.77778 2 CGTTTTT 6610 0.0 67.71558 1 TAAGGGA 2590 0.0 67.49035 4 GTGTACG 185 0.0 67.02702 1 GATCGAC 120 0.0 66.666664 8 CGGGACG 120 0.0 66.666664 6 >>END_MODULE