##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547794_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2856331 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.729334240324388 31.0 31.0 33.0 30.0 34.0 2 32.16926364626509 33.0 31.0 34.0 30.0 34.0 3 32.344559156484316 34.0 31.0 34.0 30.0 34.0 4 35.94581020196889 37.0 35.0 37.0 35.0 37.0 5 35.89267910476762 37.0 35.0 37.0 35.0 37.0 6 35.94490239401526 37.0 35.0 37.0 35.0 37.0 7 36.211231821522084 37.0 35.0 37.0 35.0 37.0 8 36.15443973405043 37.0 35.0 37.0 35.0 37.0 9 38.00433388147242 39.0 39.0 39.0 35.0 39.0 10-11 37.43320889630789 39.0 37.0 39.0 35.0 39.0 12-13 36.879064786259015 39.0 35.0 39.0 33.0 39.0 14-15 37.95124812215391 40.0 36.0 41.0 33.0 41.0 16-17 38.100371070439664 40.0 36.0 41.0 33.5 41.0 18-19 37.99461582008527 40.0 36.0 41.0 33.5 41.0 20-21 37.80176247080608 40.0 35.0 41.0 33.0 41.0 22-23 37.619995896834084 39.5 35.0 41.0 33.0 41.0 24-25 37.54829972436668 39.0 35.0 41.0 33.0 41.0 26-27 37.53811235462557 40.0 35.0 41.0 33.0 41.0 28-29 37.51116642293908 40.0 35.0 41.0 33.0 41.0 30-31 37.34237436067458 40.0 35.0 41.0 33.0 41.0 32-33 37.0675231617064 40.0 35.0 41.0 32.0 41.0 34-35 36.8222100309803 39.0 35.0 41.0 31.0 41.0 36-37 36.62179733371238 39.0 35.0 41.0 31.0 41.0 38-39 36.517820588720284 39.0 35.0 41.0 30.0 41.0 40-41 36.359942002520015 39.0 35.0 41.0 30.0 41.0 42-43 36.33215180593566 39.0 35.0 41.0 30.0 41.0 44-45 36.23437689819562 39.0 35.0 41.0 30.0 41.0 46-47 36.16049347922212 39.0 35.0 41.0 30.0 41.0 48-49 36.042546189499745 38.0 35.0 41.0 30.0 41.0 50-51 35.85607637910313 38.0 35.0 40.0 29.0 41.0 52-53 35.6786291574751 38.0 35.0 40.0 29.0 41.0 54-55 35.49911179761729 37.5 35.0 40.0 28.5 41.0 56-57 35.21860876768133 37.0 34.5 40.0 27.5 41.0 58-59 34.929117983875116 37.0 34.0 40.0 27.0 41.0 60-61 34.62839233268133 36.0 34.0 39.5 26.5 41.0 62-63 34.25272351138576 36.0 33.5 39.0 26.0 41.0 64-65 33.95930303595767 35.0 33.0 39.0 26.0 40.0 66-67 33.672499790815564 35.0 33.0 38.5 25.0 40.0 68-69 33.236213169972245 35.0 33.0 37.5 24.0 40.0 70-71 32.9837215994925 35.0 33.0 37.0 24.0 39.5 72-73 32.70551767284674 35.0 33.0 36.5 24.0 39.0 74-75 32.40705523974637 35.0 32.5 36.0 23.5 39.0 76-77 30.319593737560528 33.0 29.5 34.5 19.5 36.0 78-79 31.47260769147553 34.0 31.5 35.0 20.0 37.0 80-81 31.6908654844274 35.0 32.0 35.0 20.0 37.0 82-83 31.519016528546587 35.0 32.0 35.0 20.0 36.0 84-85 31.305697413920164 34.5 32.0 35.0 20.0 36.0 86 30.864516752435204 34.0 31.0 35.0 19.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 6.0 9 18.0 10 16.0 11 33.0 12 76.0 13 177.0 14 452.0 15 1342.0 16 3323.0 17 7097.0 18 13393.0 19 19650.0 20 22044.0 21 22061.0 22 19822.0 23 19195.0 24 20779.0 25 23324.0 26 27453.0 27 33520.0 28 41065.0 29 50914.0 30 63071.0 31 77045.0 32 96023.0 33 126932.0 34 280874.0 35 266014.0 36 251805.0 37 433166.0 38 625768.0 39 308470.0 40 1403.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 34.038106928083614 23.26232498964581 29.9112742885891 12.788293793681474 2 31.53451053116743 25.860938385642278 29.711087405486268 12.89346367770402 3 30.057265772069137 25.453842709405876 31.468411749198534 13.020479769326453 4 27.199613770252817 27.627995494919883 30.7969909649827 14.375399769844602 5 24.695352184323173 32.03998416149949 28.91426098725953 14.350402666917805 6 22.55606930709361 41.417748853336676 25.892657398599813 10.133524440969902 7 87.92202304284763 4.050966082012204 6.330603841081444 1.6964070340587278 8 88.23560714777105 3.9446058597550495 6.002455597758103 1.8173313947158085 9 83.31394365709016 6.006656791527313 8.085897607805258 2.5935019435772677 10-11 35.90777819517416 27.814563508220864 24.270751534048397 12.00690676255658 12-13 29.0479989889127 27.397174907249894 26.293556314026628 17.261269789810775 14-15 17.95031808288325 32.1973713830785 33.0688565155789 16.783454018459345 16-17 22.49574716655738 27.710233862952162 31.34323367985013 18.450785290640333 18-19 24.643484946247476 28.937962722107486 28.977296398771713 17.441255932873325 20-21 26.55392529787339 28.988324532415888 28.368193322132484 16.08955684757824 22-23 22.161927311645606 25.68826932172777 31.379906600460522 20.769896766166106 24-25 19.839787475611196 28.92516658608544 32.81564706611383 18.419398872189532 26-27 18.708948647758262 34.59824859233751 28.089426610571394 18.603376149332835 28-29 17.522479012411377 30.331411170484092 33.58625103323109 18.559858783873437 30-31 21.968479843547545 29.82353935870878 29.867966982818167 18.34001381492551 32-33 24.33863582336921 29.535214931322734 28.061873781434993 18.06427546387306 34-35 19.981350200659517 29.715148559463174 29.559109220885116 20.744392018992198 36-37 22.56037553070705 30.182041227014654 28.771175329469866 18.486407912808424 38-39 20.320404042808764 31.21733790656615 28.502018848655847 19.96023920196924 40-41 20.739035496936452 28.198902718207382 29.214996441238778 21.847065343617388 42-43 21.18119363617172 27.505110577170505 28.842315543961817 22.47138024269596 44-45 20.008727980055532 31.57795787673067 27.981893555053666 20.431420588160126 46-47 21.00546120180049 30.864070025497746 27.760823237923056 20.36964553477871 48-49 21.443208087578085 28.482780882187676 30.01376591158378 20.060245118650464 50-51 19.4383984209113 31.848147151012963 28.46347289582335 20.249981532252388 52-53 21.766454938170682 28.27765759640602 29.205036111010944 20.750851354412355 54-55 21.88946239073833 28.49738003053568 29.687140601001776 19.92601697772422 56-57 22.00028638137527 27.373473172401937 28.91613401948164 21.710106426741156 58-59 22.634369055967255 28.905578520136498 28.294269816768434 20.165782607127817 60-61 22.949913717982966 30.100503057943918 27.29225009286389 19.657333131209235 62-63 21.98703511602822 28.155035253267215 30.16154290241572 19.696386728288843 64-65 20.320053943327995 30.660609712249737 29.622004592604988 19.39733175181728 66-67 19.698557345069602 30.29645373732946 26.406218326937598 23.59877059066334 68-69 18.604058843320328 32.35881975863442 26.18381763178007 22.853303766265185 70-71 19.776506994462476 30.436983668909523 28.79102597002938 20.99548336659862 72-73 22.143091959580318 30.287508695595854 27.610683075595933 19.958716269227903 74-75 21.036497520770528 31.5378714861828 26.17898625894548 21.246644734101196 76-77 23.059494855463182 29.381906368694665 27.25611982644869 20.30247894939347 78-79 19.202833985276914 30.285110514152596 29.23099598750985 21.281059513060637 80-81 17.109869269352888 29.880045414904643 30.00074221089923 23.009343104843243 82-83 19.28748803972649 28.533562811872994 30.482969235708328 21.69597991269219 84-85 17.78636649603985 28.627512007536943 29.331334498697803 24.254786997725404 86 18.554222182233083 29.387630495205215 30.16534148178205 21.89280584077966 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1711.0 1 2084.0 2 4716.0 3 4757.5 4 2953.5 5 3955.0 6 4974.0 7 5405.0 8 5533.0 9 5727.0 10 5607.0 11 5431.0 12 5445.5 13 5565.5 14 5681.0 15 5973.0 16 6277.5 17 6601.0 18 7159.0 19 8374.5 20 9370.5 21 9398.0 22 9538.5 23 11363.5 24 13314.5 25 17113.0 26 23321.5 27 28492.0 28 34350.5 29 37715.0 30 43089.0 31 51441.0 32 59363.5 33 67312.0 34 69839.5 35 73738.5 36 78114.0 37 83277.0 38 92306.0 39 99586.5 40 111571.0 41 128952.5 42 143775.5 43 149787.0 44 152972.5 45 153373.5 46 155650.5 47 162100.0 48 157337.5 49 139392.5 50 127598.0 51 112066.5 52 91652.5 53 83114.0 54 75114.0 55 64834.5 56 57411.5 57 55924.0 58 48358.0 59 33804.5 60 25694.5 61 22741.0 62 19202.0 63 14097.5 64 10701.0 65 8070.5 66 4499.0 67 3270.0 68 2861.0 69 2117.5 70 1353.5 71 1212.0 72 960.5 73 504.5 74 238.0 75 126.0 76 66.5 77 47.0 78 39.0 79 41.0 80 53.0 81 46.5 82 19.5 83 10.0 84 8.0 85 6.5 86 6.0 87 4.0 88 2.5 89 2.0 90 0.5 91 0.5 92 0.5 93 0.0 94 1.0 95 1.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2856331.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.410530141032035 #Duplication Level Percentage of deduplicated Percentage of total 1 80.36081046734809 12.384026918648305 2 8.64201765872734 2.663561472182976 3 2.6386889595791496 1.2199078723320884 4 1.2013536124890858 0.7405398422120311 5 0.7053905586885855 0.5435221232934936 6 0.49463286566493103 0.4573532811044681 7 0.3376891492058882 0.36427781684957633 8 0.26740162900381353 0.3296640690819468 9 0.2216415167004191 0.30740519462542776 >10 2.2655703777349845 8.112349108390493 >50 0.9184211995503616 10.374860210498591 >100 1.9344845251039606 60.569390300451865 >500 0.009151907848817406 0.9263228175081099 >1k 0.0025167746584247867 0.5827244673019386 >5k 0.0 0.0 >10k+ 2.2879769622043513E-4 0.4240945055187099 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12028 0.42109965546710093 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.03374958994598315 0.0 2 0.0 0.0 0.0 0.1287665890262718 0.0 3 0.0 0.0 0.0 0.1956355898528567 0.0 4 0.0 0.0 0.0 0.294013543948513 0.0 5 0.0 0.0 0.0 0.4892640243725255 0.0 6 0.0 0.0 0.0 0.6610228296370414 0.0 7 0.0 0.0 0.0 0.7614313607211489 0.0 8 0.0 0.0 0.0 0.9596576867316848 0.0 9 0.0 0.0 0.0 1.0246361503621253 0.0 10 0.0 0.0 0.0 1.1573588635210694 0.0 11 0.0 0.0 0.0 1.3879693915025955 0.0 12 0.0 0.0 0.0 1.545584177744106 0.0 13 0.0 0.0 0.0 1.6059063182803393 0.0 14 0.0 0.0 0.0 1.6343343961186572 0.0 15 0.0 0.0 0.0 1.6820879652953387 0.0 16 0.0 0.0 0.0 1.7965354855582214 0.0 17 0.0 0.0 0.0 1.923551577180656 0.0 18 0.0 0.0 0.0 2.07090844863568 0.0 19 0.0 0.0 0.0 2.168726243562108 0.0 20 0.0 0.0 0.0 2.273511018155809 0.0 21 0.0 0.0 0.0 2.409979795758965 3.5009948076746006E-5 22 0.0 0.0 0.0 2.5585270054485982 3.5009948076746006E-5 23 3.5009948076746006E-5 0.0 0.0 2.7108202795824434 3.5009948076746006E-5 24 3.5009948076746006E-5 0.0 0.0 2.821556745349191 3.5009948076746006E-5 25 3.5009948076746006E-5 0.0 0.0 2.932958400129397 3.5009948076746006E-5 26 3.5009948076746006E-5 0.0 0.0 3.033576990901965 3.5009948076746006E-5 27 3.5009948076746006E-5 0.0 0.0 3.1429130587456426 3.5009948076746006E-5 28 3.5009948076746006E-5 0.0 0.0 3.258901016723902 3.5009948076746006E-5 29 3.5009948076746006E-5 0.0 0.0 3.4040172515020144 3.5009948076746006E-5 30 7.001989615349201E-5 0.0 0.0 3.5522493716589567 3.5009948076746006E-5 31 1.0502984423023802E-4 0.0 0.0 3.6976806959697597 3.5009948076746006E-5 32 1.0502984423023802E-4 0.0 0.0 3.8227712404479735 3.5009948076746006E-5 33 1.0502984423023802E-4 0.0 0.0 3.9469515262761914 3.5009948076746006E-5 34 1.0502984423023802E-4 0.0 0.0 4.086221099725487 3.5009948076746006E-5 35 1.0502984423023802E-4 0.0 0.0 4.243450776538153 3.5009948076746006E-5 36 1.0502984423023802E-4 0.0 0.0 4.386816513912428 3.5009948076746006E-5 37 1.0502984423023802E-4 0.0 0.0 4.5347685544847565 3.5009948076746006E-5 38 1.0502984423023802E-4 0.0 0.0 4.701520937174298 3.5009948076746006E-5 39 1.0502984423023802E-4 0.0 0.0 4.956288329328779 3.5009948076746006E-5 40 1.0502984423023802E-4 0.0 0.0 5.126261627241381 3.5009948076746006E-5 41 1.0502984423023802E-4 0.0 0.0 5.2984755618308945 3.5009948076746006E-5 42 1.0502984423023802E-4 0.0 0.0 5.475135759826155 3.5009948076746006E-5 43 1.0502984423023802E-4 0.0 0.0 5.637616928850333 3.5009948076746006E-5 44 1.0502984423023802E-4 0.0 0.0 5.809130664478311 3.5009948076746006E-5 45 1.0502984423023802E-4 0.0 0.0 5.977003365506309 3.5009948076746006E-5 46 1.0502984423023802E-4 0.0 0.0 6.165426906055355 3.5009948076746006E-5 47 1.0502984423023802E-4 0.0 0.0 6.364983610092808 3.5009948076746006E-5 48 1.0502984423023802E-4 0.0 0.0 6.548750827547647 3.5009948076746006E-5 49 1.0502984423023802E-4 0.0 0.0 6.744631487037042 3.5009948076746006E-5 50 1.4003979230698402E-4 0.0 0.0 6.948739484324471 3.5009948076746006E-5 51 1.4003979230698402E-4 0.0 0.0 7.161880048215701 3.5009948076746006E-5 52 1.4003979230698402E-4 0.0 0.0 7.406984694700999 3.5009948076746006E-5 53 1.4003979230698402E-4 0.0 0.0 7.6190399502018495 3.5009948076746006E-5 54 1.7504974038373003E-4 0.0 0.0 7.832180514093079 3.5009948076746006E-5 55 1.7504974038373003E-4 0.0 0.0 8.049452251857366 3.5009948076746006E-5 56 2.1005968846047604E-4 0.0 0.0 8.275161387108147 3.5009948076746006E-5 57 2.1005968846047604E-4 0.0 0.0 8.502060860593538 3.5009948076746006E-5 58 2.1005968846047604E-4 0.0 0.0 8.701092415409839 3.5009948076746006E-5 59 2.4506963653722207E-4 0.0 0.0 8.920639799799114 3.5009948076746006E-5 60 2.4506963653722207E-4 0.0 0.0 9.161298182878665 3.5009948076746006E-5 61 2.4506963653722207E-4 0.0 0.0 9.398525591046695 3.5009948076746006E-5 62 2.4506963653722207E-4 0.0 0.0 9.680985852129883 3.5009948076746006E-5 63 2.4506963653722207E-4 0.0 0.0 9.960190188041931 3.5009948076746006E-5 64 2.4506963653722207E-4 0.0 0.0 10.227316091867504 3.5009948076746006E-5 65 3.150895326907141E-4 0.0 0.0 10.474556345185485 3.5009948076746006E-5 66 3.150895326907141E-4 0.0 0.0 10.715879917278494 3.5009948076746006E-5 67 3.5009948076746006E-4 0.0 0.0 10.968511702600294 3.5009948076746006E-5 68 3.5009948076746006E-4 0.0 0.0 11.26077474914497 3.5009948076746006E-5 69 3.851094288442061E-4 0.0 0.0 11.6819794344563 3.5009948076746006E-5 70 3.851094288442061E-4 0.0 0.0 11.956947566651063 3.5009948076746006E-5 71 3.851094288442061E-4 0.0 0.0 12.215811122730523 3.5009948076746006E-5 72 3.851094288442061E-4 0.0 0.0 12.479190962111884 3.5009948076746006E-5 73 3.851094288442061E-4 0.0 0.0 12.751148238772046 3.5009948076746006E-5 74 3.851094288442061E-4 0.0 0.0 13.052758941453215 3.5009948076746006E-5 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAATCG 20 4.0919418E-5 80.0 3 GCGCGAC 140 0.0 74.28571 9 CGTTAGG 470 0.0 72.34042 2 GTTAGCG 135 0.0 71.11111 1 TATAGCG 165 0.0 70.30303 1 CGTTTTT 7780 0.0 68.79177 1 TAGCGCG 140 0.0 68.57143 1 TAGGGTA 2825 0.0 67.539825 5 TAACGCG 90 0.0 66.66667 1 TTCGTAG 270 0.0 66.666664 1 TACGGGT 745 0.0 66.04027 4 CGGGATC 620 0.0 65.80645 6 TACGCGG 110 0.0 65.454544 2 GTACGGG 865 0.0 64.27746 3 CGAGGGT 910 0.0 64.17582 4 ACGGGTA 800 0.0 63.0 5 AGGGTAC 2115 0.0 62.978725 6 CGAGGGA 1620 0.0 62.962967 4 GCGAGGG 2230 0.0 62.600895 3 CGGGTGC 730 0.0 61.917805 6 >>END_MODULE