##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547793_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4534282 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.73794660323288 31.0 31.0 33.0 30.0 34.0 2 32.181701535105226 33.0 31.0 34.0 30.0 34.0 3 32.34859565417413 34.0 31.0 34.0 30.0 34.0 4 35.9488772423065 37.0 35.0 37.0 35.0 37.0 5 35.885564682567164 37.0 35.0 37.0 35.0 37.0 6 35.93921154440769 37.0 35.0 37.0 35.0 37.0 7 36.20121443703766 37.0 35.0 37.0 35.0 37.0 8 36.14329391070075 37.0 35.0 37.0 35.0 37.0 9 37.984670560851754 39.0 39.0 39.0 35.0 39.0 10-11 37.47077398362078 39.0 37.0 39.0 34.5 39.0 12-13 36.83100135809815 39.0 35.0 39.0 33.0 39.0 14-15 37.92673239114815 40.0 36.0 41.0 33.0 41.0 16-17 38.07414922583112 40.0 36.0 41.0 33.0 41.0 18-19 37.98146365841384 40.0 36.0 41.0 33.5 41.0 20-21 37.777312482990695 40.0 35.0 41.0 33.0 41.0 22-23 37.56880482951877 39.5 35.0 41.0 33.0 41.0 24-25 37.515825107481184 39.0 35.0 41.0 33.0 41.0 26-27 37.47151787206883 39.0 35.0 41.0 33.0 41.0 28-29 37.4605687295144 40.0 35.0 41.0 33.0 41.0 30-31 37.32684039060649 39.0 35.0 41.0 33.0 41.0 32-33 37.03418975705525 39.0 35.0 41.0 32.0 41.0 34-35 36.776519413657994 39.0 35.0 41.0 31.0 41.0 36-37 36.58920916255319 39.0 35.0 41.0 31.0 41.0 38-39 36.49936119985479 39.0 35.0 41.0 30.5 41.0 40-41 36.37200002117204 39.0 35.0 41.0 30.0 41.0 42-43 36.32627150230179 39.0 35.0 41.0 30.0 41.0 44-45 36.24840106989376 39.0 35.0 41.0 30.0 41.0 46-47 36.16387754444915 38.5 35.0 41.0 30.0 41.0 48-49 36.07879472428049 38.0 35.0 40.5 30.0 41.0 50-51 35.90852399564032 38.0 35.0 40.0 29.5 41.0 52-53 35.71774450728914 38.0 35.0 40.0 29.0 41.0 54-55 35.54433204639676 37.5 35.0 40.0 28.5 41.0 56-57 35.27884966131352 37.0 34.5 40.0 28.0 41.0 58-59 34.99399452879199 37.0 34.0 40.0 27.0 41.0 60-61 34.682833357078366 36.0 34.0 40.0 26.5 41.0 62-63 34.290093117278545 36.0 33.5 39.0 26.0 41.0 64-65 33.964188817545974 35.0 33.0 39.0 26.0 40.5 66-67 33.67264717986221 35.0 33.0 38.5 25.0 40.0 68-69 33.20250482876892 35.0 33.0 37.5 23.5 40.0 70-71 32.90119483084643 35.0 33.0 37.0 23.5 39.5 72-73 32.60818945535368 35.0 33.0 37.0 22.5 39.0 74-75 32.29221792998318 35.0 32.0 36.0 21.5 39.0 76-77 30.217375540383237 33.0 29.5 34.5 18.5 36.0 78-79 31.320647238085325 34.0 31.0 35.0 20.0 37.0 80-81 31.489757805094612 35.0 32.0 35.0 19.5 37.0 82-83 31.279855002401703 35.0 32.0 35.0 19.0 36.5 84-85 31.04785950675322 34.0 31.0 35.0 18.0 36.0 86 30.60916480271849 34.0 31.0 35.0 17.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 6.0 9 11.0 10 17.0 11 35.0 12 68.0 13 199.0 14 593.0 15 1782.0 16 4120.0 17 9212.0 18 18156.0 19 28163.0 20 34448.0 21 36219.0 22 33454.0 23 32301.0 24 33497.0 25 38342.0 26 46267.0 27 56228.0 28 69691.0 29 85934.0 30 105470.0 31 129750.0 32 158786.0 33 205112.0 34 447381.0 35 430581.0 36 393453.0 37 653955.0 38 958545.0 39 520384.0 40 2121.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.48508098966937 23.88115692848394 29.607488021256728 13.026274060589968 2 29.870462401765042 26.659590206343587 30.729385600630927 12.740561791260447 3 28.83047415224726 25.943842928163708 31.514515418317607 13.711167501271426 4 26.482539021613565 26.981383160553314 32.13412840224758 14.401949415585532 5 25.470581670923863 30.75274100728627 29.03533569372174 14.741341628068128 6 22.901950077211783 40.432796195737275 25.57496423910114 11.0902894879498 7 87.22509980631995 3.8045053219010203 7.221716690757214 1.7486781810218244 8 87.64373278944714 4.183881814143893 6.240899882274635 1.9314855141343217 9 82.49535428100855 6.468675746237221 7.4807213137603705 3.5552486589938606 10-11 36.43914295581968 30.685707240970018 21.255647531406296 11.619502271804004 12-13 28.58679720405568 24.841849271836203 29.364593997462002 17.206759526646113 14-15 16.29084825337286 32.129320584824676 34.53007554448532 17.049755617317143 16-17 21.44566659065316 27.976380825012647 31.99973005648965 18.57822252784454 18-19 22.662364184671354 29.4507487624281 29.852863143492176 18.03402390940837 20-21 25.030159129935015 29.42512177231147 29.84769143163129 15.69702766612222 22-23 21.463387147072016 24.457896531358216 32.99359192921834 21.085124392351425 24-25 19.316696667741443 28.73411931591374 33.64558049102372 18.3036035253211 26-27 18.031708217530362 33.93981671188514 29.598633256599392 18.429841813985103 28-29 16.279093360315922 29.64818906278877 34.80772700065854 19.26499057623677 30-31 20.877296559852255 29.661895753285744 31.476251366809567 17.984556320052437 32-33 23.819482334799645 29.193100473239202 28.831565835561175 18.155851356399978 34-35 19.46785621185449 28.79369875980365 30.52390654132231 21.214538487019556 36-37 21.268681568548228 29.90265051886936 30.039474827547117 18.789193085035294 38-39 19.044382329991826 31.065227085567244 29.232886265124225 20.657504319316708 40-41 20.046084473793204 27.96281748687003 29.04287823298154 22.94821980635523 42-43 19.837694258980804 27.51023204996954 29.384200188695807 23.267873502353844 44-45 18.617578262666505 30.922470194840106 29.453681972140245 21.006269570353144 46-47 19.992669181140478 30.489248352881447 29.067093753763 20.450988712215075 48-49 20.004821049947928 28.341157431319886 31.155803719309915 20.49821779942227 50-51 18.55787752063061 31.034196814401927 29.486267064995076 20.921658599972385 52-53 20.516169925028922 27.699578455861367 30.64744318946197 21.13680842964774 54-55 20.687795774501893 28.028891895122538 30.99755374720849 20.285758583167084 56-57 20.90402626038698 27.234929366986876 29.815845154756587 22.045199217869555 58-59 21.464445749073395 28.59238794587544 29.242998119658193 20.700168185392968 60-61 22.181626550796796 29.801399648279485 28.16958671736782 19.847387083555898 62-63 21.120951453835467 28.13024200965004 30.406666369669992 20.342140166844498 64-65 19.066833514104328 30.69641455912976 30.034755226957653 20.201996699808262 66-67 18.234386392377008 30.262663416170412 27.349412762593943 24.153537428858638 68-69 17.436421025423652 32.51921693445622 26.673131490277846 23.371230549842288 70-71 18.53743326947905 31.03871792711613 29.243406122512894 21.180442680891925 72-73 20.520183790950806 30.947005501642817 27.775930125210564 20.756880582195812 74-75 19.777287782277327 32.132463309516254 26.450350904509246 21.639898003697166 76-77 22.09398312676627 29.704052372569684 27.86627518976544 20.335689310898616 78-79 18.278991028789125 29.867374812594367 30.07800352955551 21.77563062906101 80-81 16.643803803998075 29.511232428860843 30.82205738416799 23.022906382973094 82-83 17.59758215302886 28.92078613548959 30.781698182865558 22.699933528615997 84-85 16.29672569990133 29.04908649263544 29.994671703259744 24.659516104203487 86 17.270871110354406 28.657414779230756 30.50879940859435 23.562914701820485 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2605.0 1 3316.5 2 10492.0 3 10933.0 4 5583.0 5 7547.5 6 9935.0 7 11031.0 8 11640.0 9 11683.5 10 10749.5 11 10016.5 12 9582.0 13 9536.5 14 9561.0 15 9400.5 16 9305.5 17 9672.0 18 10805.0 19 11579.5 20 12005.0 21 12488.0 22 12739.5 23 17992.5 24 26111.5 25 31308.0 26 37082.0 27 46208.0 28 61599.5 29 71560.0 30 73622.5 31 85123.5 32 99653.0 33 114409.0 34 125609.5 35 132117.0 36 137089.0 37 148370.5 38 159907.5 39 163973.5 40 186448.0 41 212029.0 42 227043.5 43 235141.0 44 237857.5 45 244616.0 46 241693.0 47 235950.0 48 234992.0 49 213428.5 50 194045.0 51 177936.5 52 145186.5 53 119482.0 54 106467.0 55 95909.0 56 83098.0 57 76893.0 58 70129.0 59 53100.0 60 37916.5 61 29954.0 62 21941.0 63 14025.5 64 11079.0 65 9917.5 66 7149.5 67 4957.5 68 3836.5 69 2645.0 70 1924.0 71 1859.0 72 1329.0 73 698.5 74 537.0 75 390.5 76 317.0 77 213.0 78 75.0 79 53.0 80 46.5 81 30.5 82 20.5 83 17.5 84 11.5 85 8.5 86 9.0 87 10.5 88 7.5 89 4.5 90 3.5 91 1.0 92 3.0 93 5.0 94 4.0 95 3.5 96 3.5 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 4534282.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.582005878374563 #Duplication Level Percentage of deduplicated Percentage of total 1 75.94243837825594 11.833355212280823 2 10.343896330753788 3.223573068622052 3 3.6346863291694835 1.6990711124149966 4 1.831210318373592 1.1413571978174986 5 1.1551770353582043 0.8999987677757421 6 0.797621152721206 0.7457122494250638 7 0.6143536836103499 0.6701003896592278 8 0.4884011769146552 0.608821600775137 9 0.40547835840502716 0.5686349547798722 >10 2.733633416942344 8.196901748520162 >50 0.5225075441116347 5.97842696630931 >100 1.462503582986151 56.569034269037274 >500 0.062478284356488195 5.589582840258163 >1k 0.005326489680161436 1.4866627715409209 >5k 1.4395918054490366E-4 0.2120471245473606 >10k+ 1.4395918054490366E-4 0.5767197262363949 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 25710 0.5670136969866453 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCCATAACCCTCGTATGCC 9453 0.20847843164584823 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.5437945853389798E-4 0.0 0.0 0.05030564927368875 0.0 2 1.5437945853389798E-4 0.0 0.0 0.17678653422967516 0.0 3 1.5437945853389798E-4 0.0 0.0 0.24912433765698738 0.0 4 1.5437945853389798E-4 0.0 0.0 0.3909108432161917 0.0 5 1.5437945853389798E-4 0.0 0.0 0.7610466221553931 0.0 6 1.5437945853389798E-4 0.0 0.0 0.9856025716971287 0.0 7 1.5437945853389798E-4 0.0 0.0 1.1890967522531681 0.0 8 1.5437945853389798E-4 0.0 0.0 1.5311354697392001 0.0 9 1.5437945853389798E-4 0.0 0.0 1.6259465114873755 0.0 10 1.5437945853389798E-4 0.0 0.0 2.0208712206254487 0.0 11 1.5437945853389798E-4 0.0 0.0 2.33613612916003 0.0 12 1.5437945853389798E-4 0.0 0.0 2.637617157468371 0.0 13 1.7643366689588342E-4 0.0 0.0 2.72391527478882 0.0 14 1.7643366689588342E-4 0.0 0.0 2.761539754254367 0.0 15 1.7643366689588342E-4 0.0 0.0 2.8415303679832884 0.0 16 1.7643366689588342E-4 0.0 0.0 2.976965261534241 0.0 17 1.7643366689588342E-4 0.0 0.0 3.1516345917611654 0.0 18 1.7643366689588342E-4 0.0 0.0 3.3314646067447944 0.0 19 1.7643366689588342E-4 0.0 0.0 3.4889978170744564 0.0 20 1.7643366689588342E-4 0.0 0.0 3.6341145080963204 0.0 21 1.7643366689588342E-4 0.0 0.0 3.8141871193719314 0.0 22 1.7643366689588342E-4 0.0 0.0 4.0349056366586815 0.0 23 1.7643366689588342E-4 0.0 0.0 4.246339332225036 0.0 24 1.7643366689588342E-4 0.0 0.0 4.404093084638317 0.0 25 1.7643366689588342E-4 4.4108416723970854E-5 0.0 4.54530618078011 0.0 26 1.7643366689588342E-4 4.4108416723970854E-5 0.0 4.677653485160385 0.0 27 1.7643366689588342E-4 4.4108416723970854E-5 0.0 4.832429919444799 0.0 28 1.7643366689588342E-4 4.4108416723970854E-5 0.0 4.985243529184996 0.0 29 1.7643366689588342E-4 4.4108416723970854E-5 0.0 5.177644442934956 0.0 30 1.7643366689588342E-4 4.4108416723970854E-5 0.0 5.379021419488246 0.0 31 1.9848787525786883E-4 4.4108416723970854E-5 0.0 5.564276769728923 0.0 32 1.9848787525786883E-4 4.4108416723970854E-5 0.0 5.737997768996282 0.0 33 1.9848787525786883E-4 4.4108416723970854E-5 0.0 5.914321164850356 0.0 34 1.9848787525786883E-4 4.4108416723970854E-5 0.0 6.100017599258273 0.0 35 1.9848787525786883E-4 4.4108416723970854E-5 0.0 6.305606929608701 0.0 36 2.2054208361985426E-4 4.4108416723970854E-5 0.0 6.5001029931530505 0.0 37 2.2054208361985426E-4 4.4108416723970854E-5 0.0 6.693628671529472 0.0 38 2.4259629198183967E-4 4.4108416723970854E-5 0.0 6.911855063271318 0.0 39 2.4259629198183967E-4 4.4108416723970854E-5 0.0 7.210182339783895 0.0 40 2.4259629198183967E-4 4.4108416723970854E-5 0.0 7.441354551834227 0.0 41 2.4259629198183967E-4 4.4108416723970854E-5 0.0 7.670806535632323 0.0 42 2.4259629198183967E-4 4.4108416723970854E-5 0.0 7.897501743385171 0.0 43 2.4259629198183967E-4 4.4108416723970854E-5 0.0 8.11621332771098 0.0 44 2.646505003438251E-4 4.4108416723970854E-5 0.0 8.343459890672879 0.0 45 2.646505003438251E-4 4.4108416723970854E-5 0.0 8.568611303840388 0.0 46 2.646505003438251E-4 4.4108416723970854E-5 0.0 8.802826996644672 0.0 47 2.646505003438251E-4 4.4108416723970854E-5 0.0 9.04628340275263 0.0 48 2.646505003438251E-4 4.4108416723970854E-5 0.0 9.279793360889332 0.0 49 2.646505003438251E-4 4.4108416723970854E-5 0.0 9.526844602960292 0.0 50 2.646505003438251E-4 4.4108416723970854E-5 0.0 9.784614190295178 0.0 51 2.646505003438251E-4 4.4108416723970854E-5 0.0 10.038193478041286 0.0 52 2.646505003438251E-4 4.4108416723970854E-5 0.0 10.33614583301171 0.0 53 2.646505003438251E-4 4.4108416723970854E-5 0.0 10.600487574438466 0.0 54 2.646505003438251E-4 4.4108416723970854E-5 0.0 10.872923210334072 0.0 55 2.646505003438251E-4 4.4108416723970854E-5 0.0 11.135677048758767 0.0 56 2.646505003438251E-4 4.4108416723970854E-5 0.0 11.405819046984726 0.0 57 2.646505003438251E-4 4.4108416723970854E-5 0.0 11.68701020360004 0.0 58 2.646505003438251E-4 4.4108416723970854E-5 0.0 11.954505696822562 0.0 59 2.646505003438251E-4 4.4108416723970854E-5 0.0 12.240350291402255 0.0 60 2.646505003438251E-4 4.4108416723970854E-5 0.0 12.536780905995702 0.0 61 2.646505003438251E-4 4.4108416723970854E-5 0.0 12.835196399341726 0.0 62 3.0875891706779596E-4 4.4108416723970854E-5 0.0 13.167200452023055 0.0 63 3.0875891706779596E-4 4.4108416723970854E-5 0.0 13.502358256500147 0.0 64 3.0875891706779596E-4 4.4108416723970854E-5 0.0 13.820291724246529 0.0 65 3.3081312542978137E-4 4.4108416723970854E-5 0.0 14.122809300347884 0.0 66 3.3081312542978137E-4 4.4108416723970854E-5 0.0 14.409646334303865 0.0 67 3.3081312542978137E-4 4.4108416723970854E-5 0.0 14.704444937478526 0.0 68 3.3081312542978137E-4 4.4108416723970854E-5 0.0 15.033493726239348 0.0 69 3.3081312542978137E-4 4.4108416723970854E-5 0.0 15.46807190201227 0.0 70 3.5286733379176683E-4 4.4108416723970854E-5 0.0 15.790945512431737 0.0 71 3.5286733379176683E-4 4.4108416723970854E-5 0.0 16.111172617847764 0.0 72 3.7492154215375224E-4 4.4108416723970854E-5 0.0 16.431090964346726 0.0 73 3.7492154215375224E-4 4.4108416723970854E-5 0.0 16.740577670290467 0.0 74 3.7492154215375224E-4 4.4108416723970854E-5 0.0 17.088284319325528 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 12795 0.0 69.996086 1 CGAGGGA 3190 0.0 67.460815 4 TAACGGG 1165 0.0 67.29614 3 CGTTAGG 775 0.0 67.09677 2 TAATGCG 365 0.0 65.753426 1 CGTCGGG 265 0.0 64.90566 3 TTAGGGA 8145 0.0 64.87415 4 TACGGGA 2200 0.0 64.72727 4 CGAACGG 225 0.0 64.0 2 TAGGGAC 6020 0.0 63.72093 5 TAGGGAG 6565 0.0 63.54912 5 ACGGGAT 2705 0.0 62.994457 5 CGGGATC 1550 0.0 62.967743 6 TAAGGGA 6070 0.0 62.80066 4 AGGGATT 11420 0.0 62.767075 6 AGGGACC 5435 0.0 62.5575 6 GTAGGGA 8680 0.0 62.30415 4 TATAGCG 245 0.0 62.040813 1 GGGCGAT 2645 0.0 62.003784 7 TCGTAGG 530 0.0 61.886795 2 >>END_MODULE