##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547792_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2927647 Sequences flagged as poor quality 0 Sequence length 86 %GC 39 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.844962182940773 31.0 31.0 33.0 30.0 34.0 2 32.29604149680614 33.0 31.0 34.0 31.0 34.0 3 32.36060529155325 34.0 31.0 34.0 30.0 34.0 4 35.987487562537424 37.0 35.0 37.0 35.0 37.0 5 35.96328997314225 37.0 35.0 37.0 35.0 37.0 6 36.02345603824505 37.0 35.0 37.0 35.0 37.0 7 36.29817939116294 37.0 36.0 37.0 35.0 37.0 8 36.27321770691617 37.0 37.0 37.0 35.0 37.0 9 38.14796285207882 39.0 39.0 39.0 37.0 39.0 10-11 37.6058419952952 39.0 37.5 39.0 35.0 39.0 12-13 37.128342146440474 39.0 37.0 39.0 33.5 39.0 14-15 38.334607280180975 40.0 37.0 41.0 33.5 41.0 16-17 38.421156478222954 40.0 37.0 41.0 34.0 41.0 18-19 38.17387427514315 40.0 37.0 41.0 34.0 41.0 20-21 37.88593638509015 40.0 35.0 41.0 34.0 41.0 22-23 37.70634284119636 39.5 35.0 41.0 33.0 41.0 24-25 37.600700494287736 39.0 35.0 41.0 33.0 41.0 26-27 37.53418786486212 39.0 35.0 41.0 33.0 41.0 28-29 37.47180893051655 40.0 35.0 41.0 33.0 41.0 30-31 37.20174614630794 39.0 35.0 41.0 33.0 41.0 32-33 36.66471060206371 39.0 35.0 41.0 31.5 41.0 34-35 36.17110105829016 39.0 35.0 41.0 29.5 41.0 36-37 35.91036965863712 39.0 35.0 41.0 28.5 41.0 38-39 35.78208148045171 39.0 35.0 41.0 27.0 41.0 40-41 35.63103253226909 39.0 35.0 41.0 26.5 41.0 42-43 35.55587097761445 39.0 35.0 41.0 26.0 41.0 44-45 35.44309184133196 39.0 35.0 41.0 25.0 41.0 46-47 35.350195737395936 38.0 35.0 41.0 25.0 41.0 48-49 35.223933930559255 38.0 35.0 40.5 24.0 41.0 50-51 35.055254612321775 38.0 35.0 40.0 24.0 41.0 52-53 34.86258742942711 38.0 34.5 40.0 24.0 41.0 54-55 34.6815931019006 37.0 34.0 40.0 23.5 41.0 56-57 34.421101997611046 37.0 34.0 40.0 23.0 41.0 58-59 34.1405888414826 36.5 34.0 40.0 22.0 41.0 60-61 33.850522279496126 36.0 34.0 39.5 22.0 41.0 62-63 33.51819584123359 35.5 33.0 39.0 20.5 41.0 64-65 33.20260775974699 35.0 33.0 39.0 20.0 40.5 66-67 32.89990801486655 35.0 33.0 38.5 19.5 40.0 68-69 32.44321600247571 35.0 32.5 37.5 17.5 40.0 70-71 32.12915030398132 35.0 32.0 37.0 16.0 39.5 72-73 31.817328557712045 35.0 32.0 36.5 15.0 39.0 74-75 31.498001808278115 35.0 32.0 36.0 13.0 39.0 76-77 29.467211723271284 33.0 28.0 34.5 10.0 36.0 78-79 30.58567802060836 34.0 30.5 35.0 10.0 37.0 80-81 30.7001195840892 35.0 31.0 35.0 10.0 37.0 82-83 30.500462658237144 35.0 31.0 35.0 10.0 36.0 84-85 30.26808696540259 34.0 31.0 35.0 10.0 36.0 86 29.85281866290574 34.0 30.0 35.0 10.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 7.0 10 10.0 11 18.0 12 46.0 13 159.0 14 554.0 15 1778.0 16 4956.0 17 12049.0 18 27807.0 19 42286.0 20 44486.0 21 38981.0 22 31520.0 23 25355.0 24 23145.0 25 24508.0 26 27699.0 27 32895.0 28 39438.0 29 48677.0 30 60232.0 31 75064.0 32 93802.0 33 121234.0 34 252690.0 35 269466.0 36 255360.0 37 413083.0 38 618807.0 39 340173.0 40 1354.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.27239759438211 23.425160205448268 30.579233083770003 17.723209116399623 2 33.48313509108168 24.590362157732816 29.84454751546208 12.081955235723433 3 26.881109641975282 23.420378208165125 37.2516222071855 12.4468899426741 4 23.81007682961778 26.134093352101534 36.68020768897343 13.375622129307255 5 22.94839507631897 29.941178017705006 33.96444311762996 13.145983788346069 6 21.566397861490817 38.088164317624354 30.083579065372295 10.261858755512533 7 84.79458076742176 3.1139683165354293 10.841880868834256 1.2495700472085602 8 85.98300956365298 2.4726683237425826 10.48777397001756 1.0565481425868626 9 81.40438379353795 5.464866495175135 11.396285139567714 1.7344645717192 10-11 32.344592773650646 30.46292807841929 25.549818676910157 11.642660471019902 12-13 24.815782093947803 25.298388091187224 33.8734826978799 16.012347116985072 14-15 15.869706969453626 30.504172804986396 37.741401200349635 15.884719025210348 16-17 20.125667472888637 27.814265176095343 35.32983997046092 16.730227380555103 18-19 20.966410909511975 29.57759251713065 33.846344863298064 15.609651710059309 20-21 22.742017736427922 29.01608356471938 33.78520361232075 14.456695086531948 22-23 19.659251952164997 26.01174253589999 35.64734751149985 18.68165800043516 24-25 17.883918382236658 29.017586478151223 36.409495407062394 16.68899973254972 26-27 17.01028163572999 33.6309158856925 33.12352889538937 16.235273583188135 28-29 15.661024023729636 30.048209364038765 37.55546689884402 16.735299713387576 30-31 19.376243105811593 29.70933654228122 34.35060647680543 16.563813875101747 32-33 21.19171129579488 29.651132803920692 32.480196553751185 16.67695934653324 34-35 18.11897062726483 30.48072393973727 32.99532013251598 18.404985300481925 36-37 20.04503958298251 30.83466005293671 32.36308885599937 16.757211508081404 38-39 18.546839834173998 31.96560241039989 30.978444464103767 18.50911329132235 40-41 18.91312374750098 30.131057466969207 31.22285576095752 19.732963024572292 42-43 19.23447396492815 30.133465544172505 30.805148298275032 19.826912192624317 44-45 18.371169748265416 32.23546076422465 30.955166384471898 18.438203103038038 46-47 19.578811926437854 31.725870639458925 30.536485443771056 18.158831990332168 48-49 19.2672477248794 30.486411100791866 31.69584652794548 18.550494646383257 50-51 18.109440789822 31.719073371892172 31.212215817002527 18.959270021283302 52-53 19.649295150679027 29.731743615265096 31.466532679657078 19.152428554398806 54-55 19.046524393138927 30.33615391473084 31.879492302179873 18.73782938995036 56-57 19.876354628819662 28.839252136613464 31.748158162510716 19.53623507205616 58-59 20.223869202810313 30.28037533213533 30.73724393685441 18.75851152819995 60-61 20.231725341204047 31.64324455783091 29.59776229852848 18.527267802436565 62-63 20.22830962885894 30.08480872181653 31.16567673630052 18.521204913024008 64-65 18.8886330899866 32.53042460378591 30.87136188208483 17.709580424142665 66-67 17.873739559448254 32.304372760787075 28.72021456138667 21.101673118378 68-69 17.32642289183088 33.238467615802044 28.9522268224277 20.482882669939375 70-71 18.286716260532778 32.354105532531754 29.703751852596984 19.655426354338484 72-73 19.627622455849355 32.05514530952673 29.577131395964063 18.740100838659853 74-75 18.804452859241568 32.915016735282634 28.091347761529995 20.189182643945802 76-77 21.036364698339657 31.22357306054999 29.01319728778777 18.726864953322583 78-79 17.848651152273483 32.08231730123201 30.376630106020297 19.69240144047421 80-81 16.83631940599396 31.113382180297013 30.88160901912013 21.168689394588895 82-83 17.80282937116394 30.597472987692846 31.447780418882466 20.151917222260742 84-85 16.947005564536983 30.48150955357664 30.54270204023914 22.028782841647235 86 17.939970221819777 29.846357843004977 31.159460139832433 21.054211795342813 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2218.0 1 2913.5 2 19817.0 3 21725.0 4 7934.5 5 10592.5 6 14929.0 7 17117.0 8 18372.5 9 19477.0 10 19013.5 11 17909.5 12 16477.0 13 15739.5 14 15643.0 15 15669.5 16 15775.0 17 15837.0 18 15894.5 19 16246.0 20 16869.0 21 17215.0 22 18775.5 23 20343.5 24 22284.0 25 25191.0 26 29758.0 27 39234.0 28 49548.5 29 53980.0 30 56659.5 31 63844.0 32 70012.5 33 75411.0 34 83565.0 35 89298.5 36 90613.0 37 93640.0 38 98695.5 39 104039.0 40 113566.0 41 127658.0 42 136412.0 43 137286.0 44 140912.0 45 142359.5 46 139145.5 47 136583.0 48 131936.5 49 118212.5 50 107608.0 51 98930.0 52 80717.5 53 66470.0 54 57938.0 55 49971.0 56 41924.5 57 38026.0 58 32761.5 59 24292.0 60 18823.0 61 15013.0 62 11699.5 63 7984.5 64 6037.0 65 4893.0 66 2735.5 67 1407.0 68 926.5 69 593.5 70 377.5 71 329.0 72 260.0 73 142.5 74 105.0 75 97.5 76 66.0 77 44.0 78 26.5 79 18.0 80 16.5 81 15.0 82 10.5 83 4.5 84 5.0 85 5.0 86 3.0 87 2.5 88 2.5 89 1.5 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2927647.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 19.478543284912853 #Duplication Level Percentage of deduplicated Percentage of total 1 78.65602298647951 15.321047483612416 2 7.55348002307977 2.942615751625677 3 2.7927371018758094 1.6319535156681004 4 1.6175924668131942 1.2603337952867903 5 1.1151226062689166 1.0860481977096963 6 0.8258055129975295 0.9651293057905223 7 0.6691769112802398 0.9124214002145508 8 0.534747660530374 0.8332884361717421 9 0.4030747164841697 0.7066177480881788 >10 3.5195339420270004 15.362407409168366 >50 1.0801439211947292 15.286028178429564 >100 1.2252982544175939 40.2630783829502 >500 0.004960709839905091 0.6632780906300394 >1k 0.002126018502816467 0.7158364950020244 >5k 0.0 0.0 >10k+ 1.7716820856803893E-4 2.0499158096521835 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 59401 2.0289672901138696 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTGTTCGCATCGTATGC 3217 0.10988346614192217 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 6.83142469020343E-5 0.0 0.0 0.02633514218073422 0.0 2 6.83142469020343E-5 0.0 0.0 0.07968856901122301 0.0 3 6.83142469020343E-5 0.0 0.0 0.1205063315351885 0.0 4 6.83142469020343E-5 0.0 0.0 0.17833434153776054 0.0 5 6.83142469020343E-5 0.0 0.0 0.320667074958149 0.0 6 6.83142469020343E-5 0.0 0.0 0.46566406400771676 0.0 7 6.83142469020343E-5 0.0 0.0 0.585555567320787 0.0 8 6.83142469020343E-5 0.0 0.0 0.81669682171382 0.0 9 6.83142469020343E-5 0.0 0.0 0.9343339548791231 0.0 10 6.83142469020343E-5 0.0 0.0 1.1297468581423922 0.0 11 6.83142469020343E-5 0.0 0.0 1.5064657726836603 0.0 12 6.83142469020343E-5 0.0 0.0 1.7653084541954682 0.0 13 6.83142469020343E-5 0.0 0.0 1.8549709032543882 0.0 14 6.83142469020343E-5 0.0 0.0 1.8939100239885478 0.0 15 6.83142469020343E-5 0.0 0.0 1.9445991951898574 0.0 16 6.83142469020343E-5 0.0 0.0 2.0519550341964043 0.0 17 6.83142469020343E-5 0.0 0.0 2.1919992403455746 0.0 18 6.83142469020343E-5 0.0 0.0 2.342119797912795 0.0 19 6.83142469020343E-5 0.0 0.0 2.454189319955582 0.0 20 6.83142469020343E-5 0.0 0.0 2.5605204452585983 0.0 21 6.83142469020343E-5 0.0 0.0 2.689156172175129 0.0 22 6.83142469020343E-5 0.0 0.0 2.84231671372949 0.0 23 6.83142469020343E-5 0.0 0.0 3.0043922645045664 0.0 24 6.83142469020343E-5 0.0 0.0 3.1220977119167714 0.0 25 6.83142469020343E-5 0.0 0.0 3.2254571674795494 0.0 26 6.83142469020343E-5 0.0 0.0 3.326459781524207 0.0 27 6.83142469020343E-5 0.0 0.0 3.4356259480736577 0.0 28 6.83142469020343E-5 0.0 0.0 3.5463633423018552 0.0 29 6.83142469020343E-5 0.0 0.0 3.672471442083011 0.0 30 6.83142469020343E-5 0.0 0.0 3.814189347281281 0.0 31 1.0247137035305144E-4 0.0 0.0 3.9487000994313863 0.0 32 1.0247137035305144E-4 0.0 0.0 4.074500785101483 0.0 33 1.0247137035305144E-4 0.0 0.0 4.1996183283025585 0.0 34 1.0247137035305144E-4 0.0 0.0 4.331259882082779 0.0 35 1.0247137035305144E-4 0.0 0.0 4.4791260695022315 0.0 36 1.0247137035305144E-4 0.0 0.0 4.618726233046539 0.0 37 1.0247137035305144E-4 0.0 0.0 4.7709645322677225 0.0 38 1.0247137035305144E-4 0.0 0.0 4.932322783450327 0.0 39 1.0247137035305144E-4 0.0 0.0 5.128999500281284 0.0 40 1.0247137035305144E-4 0.0 0.0 5.306001714004455 0.0 41 1.0247137035305144E-4 0.0 0.0 5.485292454998844 0.0 42 1.0247137035305144E-4 0.0 0.0 5.6665301520299405 0.0 43 1.0247137035305144E-4 0.0 0.0 5.837657340519537 0.0 44 1.0247137035305144E-4 0.0 0.0 6.0091602573670935 0.0 45 1.0247137035305144E-4 0.0 0.0 6.1761202767956656 0.0 46 1.0247137035305144E-4 0.0 0.0 6.360534586307707 0.0 47 1.0247137035305144E-4 0.0 0.0 6.55574254683027 0.0 48 1.0247137035305144E-4 0.0 0.0 6.744255711156434 0.0 49 1.0247137035305144E-4 0.0 0.0 6.94223039867853 0.0 50 1.0247137035305144E-4 0.0 0.0 7.142220356484235 0.0 51 1.0247137035305144E-4 0.0 0.0 7.347675454042102 0.0 52 1.0247137035305144E-4 0.0 0.0 7.572053597991834 0.0 53 1.0247137035305144E-4 0.0 0.0 7.780890250771353 0.0 54 1.0247137035305144E-4 0.0 0.0 7.994850472068524 0.0 55 1.0247137035305144E-4 0.0 0.0 8.201330283329924 0.0 56 1.0247137035305144E-4 0.0 0.0 8.41713498929345 0.0 57 1.0247137035305144E-4 0.0 0.0 8.646705016007736 0.0 58 1.0247137035305144E-4 0.0 0.0 8.86175826525534 0.0 59 1.0247137035305144E-4 0.0 0.0 9.093377719376686 0.0 60 1.0247137035305144E-4 0.0 0.0 9.336747223965185 0.0 61 1.0247137035305144E-4 0.0 0.0 9.577213373060346 0.0 62 1.0247137035305144E-4 0.0 0.0 9.846166563113654 0.0 63 1.0247137035305144E-4 0.0 0.0 10.10763934313119 0.0 64 1.0247137035305144E-4 0.0 0.0 10.363612826273112 0.0 65 1.0247137035305144E-4 0.0 0.0 10.61470184076154 0.0 66 1.0247137035305144E-4 0.0 0.0 10.861657843312393 0.0 67 1.0247137035305144E-4 0.0 0.0 11.115308642059647 0.0 68 1.0247137035305144E-4 0.0 0.0 11.382349033199699 0.0 69 1.0247137035305144E-4 0.0 0.0 11.693793684826074 0.0 70 1.0247137035305144E-4 0.0 0.0 11.968416957372252 0.0 71 1.0247137035305144E-4 0.0 0.0 12.24577279979451 0.0 72 1.366284938040686E-4 0.0 0.0 12.532419379795448 0.0 73 1.366284938040686E-4 0.0 0.0 12.8112439785261 0.0 74 1.366284938040686E-4 0.0 0.0 13.110187122969402 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGAACCG 15 0.0013099944 80.00001 6 CGTTTTT 24240 0.0 75.18152 1 TATAGCG 190 0.0 71.57895 1 CGGGATC 1180 0.0 69.15254 6 CGAAACG 245 0.0 68.57143 80 CTCGCGG 95 0.0 67.36842 2 CCGATCC 1760 0.0 67.27273 80 CGAGGGA 2440 0.0 65.73771 4 GGGCGAT 2135 0.0 65.38641 7 TACGGGA 1585 0.0 65.36278 4 TAGTGCG 325 0.0 65.23077 1 TAGCGGG 2180 0.0 64.58716 3 TATTGCG 335 0.0 64.477615 1 CGCGGGA 935 0.0 64.17112 4 TAGGGAC 3760 0.0 64.14894 5 AGGGCGA 1120 0.0 63.57143 6 TGGGCGA 535 0.0 63.551403 6 ATAGCGG 550 0.0 63.272728 2 CGCGAGG 325 0.0 62.76923 2 GCGGGAT 2615 0.0 62.715107 5 >>END_MODULE