##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547785_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1903775 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.76971070635973 31.0 31.0 33.0 30.0 34.0 2 32.21341282451971 33.0 31.0 34.0 31.0 34.0 3 32.36754238289714 34.0 31.0 34.0 30.0 34.0 4 35.963799818781105 37.0 35.0 37.0 35.0 37.0 5 35.902853540990925 37.0 35.0 37.0 35.0 37.0 6 35.96131948365747 37.0 35.0 37.0 35.0 37.0 7 36.20816167876981 37.0 35.0 37.0 35.0 37.0 8 36.16699452403777 37.0 35.0 37.0 35.0 37.0 9 38.06512849470132 39.0 39.0 39.0 37.0 39.0 10-11 37.523333114469935 39.0 37.5 39.0 35.0 39.0 12-13 36.47263489645573 39.0 35.0 39.0 33.0 39.0 14-15 37.372216254546885 40.0 35.0 41.0 33.0 41.0 16-17 37.64046460322255 40.0 35.0 41.0 33.0 41.0 18-19 37.53775104726137 39.0 35.0 41.0 33.0 41.0 20-21 37.34504471379233 39.0 35.0 41.0 33.0 41.0 22-23 37.18024766582185 39.0 35.0 41.0 33.0 41.0 24-25 37.112185788761806 38.5 35.0 41.0 33.0 41.0 26-27 37.08283830809838 39.0 35.0 41.0 33.0 41.0 28-29 37.11478325957637 39.0 35.0 41.0 33.0 41.0 30-31 36.95802602723536 38.0 35.0 41.0 32.5 41.0 32-33 36.655206366298536 38.0 35.0 41.0 31.5 41.0 34-35 36.3984845898281 38.0 35.0 41.0 31.0 41.0 36-37 36.21571535501832 38.0 35.0 41.0 30.5 41.0 38-39 36.128538036270044 38.0 35.0 41.0 30.0 41.0 40-41 35.956004779976624 38.0 35.0 41.0 30.0 41.0 42-43 35.929915299864746 38.0 35.0 41.0 30.0 41.0 44-45 35.824190358629565 38.0 35.0 40.0 30.0 41.0 46-47 35.770828748145135 37.5 35.0 40.0 30.0 41.0 48-49 35.70651600110307 37.0 35.0 40.0 30.0 41.0 50-51 35.50307021575554 37.0 35.0 40.0 29.0 41.0 52-53 35.32479520951793 36.5 34.5 40.0 29.0 41.0 54-55 35.1404154902759 36.0 34.0 40.0 29.0 41.0 56-57 34.829035994274534 36.0 34.0 40.0 27.5 41.0 58-59 34.53993040143925 35.5 34.0 39.0 27.0 41.0 60-61 34.24113668894696 35.0 34.0 39.0 26.5 41.0 62-63 33.818662657089206 35.0 33.5 39.0 26.0 40.0 64-65 33.51978096151068 35.0 33.0 38.0 25.0 40.0 66-67 33.29757560636105 35.0 33.0 37.0 25.0 40.0 68-69 32.92983598376909 35.0 33.0 37.0 24.0 39.5 70-71 32.712471799451095 35.0 33.0 36.0 24.0 39.0 72-73 32.456771414689236 35.0 33.0 36.0 23.5 39.0 74-75 32.17157909942089 35.0 32.5 35.5 23.0 37.5 76-77 30.13525915615028 33.0 29.5 34.5 19.5 36.0 78-79 31.19829339076309 34.0 31.0 35.0 20.0 36.0 80-81 31.500949692059198 35.0 32.0 35.0 20.0 36.0 82-83 31.373736917440347 35.0 32.0 35.0 20.0 36.0 84-85 31.19586873448806 34.0 32.0 35.0 19.0 36.0 86 30.79808065553965 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 6.0 9 11.0 10 27.0 11 24.0 12 43.0 13 102.0 14 272.0 15 822.0 16 1965.0 17 4254.0 18 8317.0 19 12179.0 20 14530.0 21 15160.0 22 14011.0 23 12992.0 24 13630.0 25 16060.0 26 19444.0 27 23829.0 28 29432.0 29 36219.0 30 45351.0 31 55915.0 32 70687.0 33 97030.0 34 251277.0 35 217404.0 36 154929.0 37 272509.0 38 350023.0 39 164900.0 40 419.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.663300547596222 23.773765282136807 31.437853737967984 13.125080432298986 2 30.23224908405668 25.609854105658492 30.828222872976063 13.329673937308767 3 29.413927591233207 24.522278105343332 32.772307651902146 13.29148665152132 4 27.470525666110753 26.137069769274206 32.32083623327336 14.071568331341677 5 24.635054037373113 31.118435739517537 30.027603051831232 14.21890717127812 6 22.3397722945201 40.69630077083689 26.544838544470856 10.419088390172158 7 88.11487702065632 3.943533243161613 6.27295767619598 1.6686320599860804 8 89.53873225564996 3.1125526913632124 5.60092447899568 1.7477905739911492 9 85.27005554753056 5.573610326850599 6.645112999172696 2.51122112644614 10-11 43.53747160247403 26.034983125631967 18.564851413638692 11.862693858255309 12-13 32.54730732360704 26.77535423041063 24.67148166143583 16.005856784546495 14-15 15.659860014970256 32.776457301939566 35.01101758348544 16.55266509960473 16-17 21.6562619006973 24.897243634358052 32.62809418129768 20.818400283646966 18-19 25.5156465443658 27.330330527504564 29.189872752820058 17.96415017530958 20-21 26.893382884006776 28.28879463171856 27.866712190253573 16.951110294021092 22-23 21.01968457406994 24.379325287914803 31.993722997728195 22.60726714028706 24-25 20.574962902653937 26.608764165933472 34.1204711691245 18.695801762288085 26-27 17.495843784060618 34.4831978568896 28.970361518561806 19.050596840487977 28-29 15.935444051949416 29.515882916836283 35.77770482331158 18.77096820790272 30-31 23.457577707449673 28.778899817467924 30.409896127431026 17.353626347651378 32-33 27.301072868379926 27.80328557733976 27.766463999159562 17.129177555120748 34-35 19.02225840763746 29.25498023663511 29.824375254428702 21.898386101298737 36-37 23.656734645638274 30.046171422568317 29.121561108849527 17.175532822943886 38-39 20.064450893619256 31.254507491694135 27.583905661120667 21.09713595356594 40-41 21.012540872739688 26.338354059697185 28.609893501070243 24.039211566492888 42-43 21.479586610812728 25.817310343921946 28.341243056558678 24.361859988706648 44-45 18.67741723680582 31.850113590103874 28.090425601764913 21.382043571325394 46-47 21.087864900001314 29.487702065632753 28.573308295360533 20.851124739005396 48-49 22.039342884532047 26.245039461070768 30.730390933802575 20.985226720594607 50-51 19.076676603064964 31.813685966041156 27.867342516841536 21.242294914052344 52-53 22.584496592296883 26.189649512153483 29.341256188362596 21.884597707187037 54-55 22.315005712334703 27.5551995377605 30.918648474740973 19.211146275163816 56-57 22.909088521490197 25.255873199301387 28.971674698953397 22.86336358025502 58-59 24.121364131790784 27.509894814250636 27.69276831558351 20.67597273837507 60-61 25.153051174639863 29.28539349450434 25.877348951425454 19.684206379430343 62-63 23.936547123478352 25.464406245485943 30.550747856233013 20.048298774802696 64-65 20.31521582119736 30.23794828695618 30.309647936337015 19.13718795550945 66-67 18.583419784375778 29.63519848721619 25.75995062441728 26.021431103990757 68-69 17.695132040288374 32.581134850494415 24.93222675999002 24.791506349227195 70-71 18.884216884873474 30.442909482475606 28.939317934104608 21.733555698546308 72-73 22.754317080537355 30.20627437591102 26.76266890782787 20.276739635723757 74-75 21.42992212840278 32.133550445824746 24.185316016861236 22.251211408911242 76-77 26.449948129374533 27.868051634253 25.637641002744548 20.044359233627922 78-79 19.103885700778715 29.380914236188627 29.550944833291748 21.96425522974091 80-81 17.029218263712885 28.784310120681276 30.90480755341361 23.281664062192224 82-83 18.879830862365562 27.17211855392575 31.612559257265172 22.335491326443513 84-85 16.66507334112487 27.044267311000514 30.030465785084896 26.26019356278972 86 17.38561542199052 26.832477577444813 31.820199340783446 23.961707659781222 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2092.0 1 1916.5 2 3987.5 3 4112.0 4 2396.5 5 3266.0 6 3980.0 7 4231.0 8 4449.5 9 4560.5 10 4173.0 11 3860.0 12 3947.5 13 4093.0 14 4118.0 15 4277.0 16 4302.0 17 4187.0 18 4385.0 19 4727.0 20 4772.5 21 4655.0 22 5166.5 23 6014.5 24 6590.5 25 8783.5 26 11809.0 27 13357.0 28 14712.5 29 15592.0 30 20788.5 31 25744.0 32 26547.5 33 33156.5 34 41693.0 35 45232.0 36 45799.0 37 45463.5 38 47589.0 39 58014.5 40 72938.0 41 88585.0 42 97219.5 43 97166.0 44 105382.5 45 112252.5 46 110926.5 47 115257.5 48 112888.5 49 99277.0 50 92345.0 51 81058.5 52 65518.0 53 58827.5 54 54219.0 55 49512.5 56 45293.0 57 43608.0 58 39454.5 59 31706.5 60 23305.5 61 16612.5 62 13302.5 63 9345.5 64 6812.0 65 6187.5 66 4240.5 67 2369.5 68 1598.0 69 1235.0 70 865.0 71 635.0 72 484.5 73 253.0 74 175.5 75 137.5 76 71.5 77 37.5 78 49.0 79 70.0 80 44.0 81 11.0 82 7.5 83 10.0 84 6.0 85 3.0 86 3.0 87 3.0 88 2.0 89 0.5 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1903775.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.182684794646123 #Duplication Level Percentage of deduplicated Percentage of total 1 79.24725517544377 12.031860961696513 2 9.31856411269191 2.8296164332340497 3 3.008683731444888 1.3703969022392237 4 1.416707276787244 0.8603768011896882 5 0.7799311939591492 0.5920724739696885 6 0.5333731168504701 0.4858821546647185 7 0.3693278502717209 0.39251718355918574 8 0.3151510677674152 0.382787145968706 9 0.25969903332591243 0.35486357080154646 >10 2.1488788281310813 7.15052903462528 >50 0.7459412383465719 8.326437794848534 >100 1.8317388575891154 61.93496217452578 >500 0.02126281071606774 1.9919456764746886 >1k 0.003137136007288683 0.7933594844717463 >5k 3.485706674765203E-4 0.5023922077306575 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9493 0.4986408582947039 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2870 0.15075310895457708 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2734 0.14360940762432536 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.08173234757258604 0.0 2 0.0 0.0 0.0 0.22560439127522947 0.0 3 0.0 0.0 0.0 0.31353495029612216 0.0 4 0.0 0.0 0.0 0.42914735197174037 0.0 5 0.0 0.0 0.0 0.6637864243411118 0.0 6 0.0 0.0 0.0 0.8507307848879201 0.0 7 0.0 0.0 0.0 0.9661856049165474 0.0 8 0.0 0.0 0.0 1.189321217055587 0.0 9 0.0 0.0 0.0 1.265590734199157 0.0 10 0.0 0.0 0.0 1.412246720331972 0.0 11 0.0 0.0 0.0 1.7352890966632086 0.0 12 0.0 0.0 0.0 1.9634673215059553 0.0 13 0.0 0.0 0.0 2.0520807343304748 0.0 14 0.0 0.0 0.0 2.0918438365878322 0.0 15 0.0 0.0 0.0 2.1585008732649604 0.0 16 0.0 0.0 0.0 2.284986408582947 0.0 17 0.0 0.0 0.0 2.4445640897690115 0.0 18 0.0 0.0 0.0 2.6177463198119524 0.0 19 0.0 0.0 0.0 2.739609460151541 0.0 20 0.0 0.0 0.0 2.870402227153944 0.0 21 0.0 0.0 0.0 3.0268282754001916 0.0 22 0.0 0.0 0.0 3.1865110110175836 0.0 23 0.0 0.0 0.0 3.340363225696314 0.0 24 0.0 0.0 0.0 3.463749655290147 0.0 25 0.0 0.0 0.0 3.5762104240259482 0.0 26 0.0 0.0 0.0 3.6954997307980197 0.0 27 0.0 0.0 0.0 3.8611705690010636 0.0 28 0.0 0.0 0.0 3.9918582815721395 0.0 29 0.0 0.0 0.0 4.150122782366614 0.0 30 0.0 0.0 0.0 4.318104818058857 0.0 31 0.0 0.0 0.0 4.46922561752308 0.0 32 0.0 0.0 0.0 4.605060997229189 0.0 33 0.0 0.0 0.0 4.738900342740082 0.0 34 0.0 0.0 0.0 4.900841748631009 0.0 35 0.0 0.0 0.0 5.082480860395792 0.0 36 0.0 0.0 0.0 5.231710680096125 0.0 37 0.0 0.0 0.0 5.412982101351263 0.0 38 0.0 0.0 0.0 5.616367480400783 0.0 39 0.0 0.0 0.0 6.002862733253667 0.0 40 0.0 0.0 0.0 6.214179721868393 0.0 41 0.0 0.0 0.0 6.413573032527478 0.0 42 0.0 0.0 0.0 6.630562960433875 0.0 43 0.0 0.0 0.0 6.794605454951347 0.0 44 0.0 0.0 0.0 6.974248532520912 0.0 45 0.0 0.0 0.0 7.155257317697732 0.0 46 0.0 0.0 0.0 7.348977689065147 0.0 47 0.0 0.0 0.0 7.564286746070308 0.0 48 0.0 0.0 0.0 7.757954590222059 0.0 49 0.0 0.0 0.0 7.973788919383856 0.0 50 0.0 0.0 0.0 8.195348715052987 0.0 51 0.0 0.0 0.0 8.419482344289635 0.0 52 0.0 0.0 0.0 8.71605100392641 0.0 53 0.0 0.0 0.0 8.947853606649945 0.0 54 0.0 0.0 0.0 9.175769195414373 0.0 55 5.252721566361571E-5 0.0 0.0 9.40231907657155 0.0 56 5.252721566361571E-5 0.0 0.0 9.608593452482568 0.0 57 5.252721566361571E-5 0.0 0.0 9.84181429002902 0.0 58 5.252721566361571E-5 0.0 0.0 10.069099552205486 0.0 59 5.252721566361571E-5 0.0 0.0 10.30668014865202 0.0 60 5.252721566361571E-5 0.0 0.0 10.55581673254455 0.0 61 5.252721566361571E-5 0.0 0.0 10.823022678625362 0.0 62 5.252721566361571E-5 0.0 0.0 11.199695342149152 0.0 63 5.252721566361571E-5 0.0 0.0 11.51522632664049 0.0 64 5.252721566361571E-5 0.0 0.0 11.806857428004886 5.252721566361571E-5 65 5.252721566361571E-5 0.0 0.0 12.067865162637391 5.252721566361571E-5 66 5.252721566361571E-5 0.0 0.0 12.304605323633307 5.252721566361571E-5 67 5.252721566361571E-5 0.0 0.0 12.557208703759635 5.252721566361571E-5 68 5.252721566361571E-5 0.0 0.0 12.868222347703904 5.252721566361571E-5 69 5.252721566361571E-5 0.0 0.0 13.286076348307967 5.252721566361571E-5 70 5.252721566361571E-5 0.0 0.0 13.56998594896981 5.252721566361571E-5 71 5.252721566361571E-5 0.0 0.0 13.838347493795222 5.252721566361571E-5 72 1.0505443132723142E-4 0.0 0.0 14.134443408491025 5.252721566361571E-5 73 1.0505443132723142E-4 0.0 0.0 14.419718716760121 5.252721566361571E-5 74 1.0505443132723142E-4 0.0 0.0 14.74874919567701 5.252721566361571E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAGCGAT 50 0.0 80.0 1 CGGGATA 520 0.0 75.38462 6 CTAGCGG 305 0.0 73.44263 2 TCGAACG 60 0.0 73.333336 1 TATAGCG 175 0.0 73.14286 1 CGAGGGA 1095 0.0 72.69407 4 CGTTTTT 5100 0.0 72.4706 1 CGTTAGG 285 0.0 70.17544 2 CGAACGG 145 0.0 68.965515 2 ACGAGGG 825 0.0 68.84849 3 CGGGGTA 250 0.0 68.8 6 CGGGTCC 105 0.0 68.57143 6 ATAGCGG 350 0.0 68.57143 2 TACGGGA 520 0.0 68.46154 4 TTGCGAG 165 0.0 67.878784 1 TTAGGCG 60 0.0 66.66667 1 CGGGATC 630 0.0 66.666664 6 TAGCGGG 1325 0.0 65.81132 3 TAGGGTG 560 0.0 65.71429 5 CGTAAGG 470 0.0 65.53191 2 >>END_MODULE