##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547784_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3532628 Sequences flagged as poor quality 0 Sequence length 86 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.7517290243977 31.0 31.0 33.0 30.0 34.0 2 32.190704200951814 33.0 31.0 34.0 30.0 34.0 3 32.3144910814272 34.0 31.0 34.0 30.0 34.0 4 35.925972392224715 37.0 35.0 37.0 35.0 37.0 5 35.86875804641757 37.0 35.0 37.0 35.0 37.0 6 35.9313771503821 37.0 35.0 37.0 35.0 37.0 7 36.24711772651975 37.0 35.0 37.0 35.0 37.0 8 36.219489569804686 37.0 36.0 37.0 35.0 37.0 9 38.09110016678801 39.0 39.0 39.0 37.0 39.0 10-11 37.47905001602207 39.0 37.5 39.0 34.5 39.0 12-13 36.95477559482629 39.0 35.0 39.0 33.0 39.0 14-15 38.14073686785022 40.0 37.0 41.0 33.0 41.0 16-17 38.25437521301422 40.0 36.5 41.0 34.0 41.0 18-19 38.1065652822771 40.0 36.0 41.0 34.0 41.0 20-21 37.897014488930054 40.0 35.0 41.0 33.5 41.0 22-23 37.713789705567635 40.0 35.0 41.0 33.0 41.0 24-25 37.634913016598404 40.0 35.0 41.0 33.0 41.0 26-27 37.599045951059665 40.0 35.0 41.0 33.0 41.0 28-29 37.53729503927388 40.0 35.0 41.0 33.0 41.0 30-31 37.33134001089274 40.0 35.0 41.0 33.0 41.0 32-33 36.986495039953255 39.5 35.0 41.0 31.5 41.0 34-35 36.64862801857427 39.0 35.0 41.0 31.0 41.0 36-37 36.45819486229515 39.0 35.0 41.0 30.0 41.0 38-39 36.37013803887644 39.0 35.0 41.0 30.0 41.0 40-41 36.22630107104399 39.0 35.0 41.0 30.0 41.0 42-43 36.15600538749056 39.0 35.0 41.0 30.0 41.0 44-45 36.05027800832694 39.0 35.0 41.0 29.5 41.0 46-47 35.949386830427656 39.0 35.0 41.0 29.0 41.0 48-49 35.82811875464951 38.0 35.0 40.5 29.0 41.0 50-51 35.670086547465516 38.0 35.0 40.0 28.0 41.0 52-53 35.49861151527984 38.0 35.0 40.0 28.0 41.0 54-55 35.303628205404024 38.0 35.0 40.0 27.5 41.0 56-57 35.03305343783721 37.0 34.0 40.0 26.5 41.0 58-59 34.741787841799365 37.0 34.0 40.0 26.0 41.0 60-61 34.40294633343788 36.0 34.0 39.5 25.5 41.0 62-63 34.03987456363931 36.0 33.5 39.0 25.0 41.0 64-65 33.68678304084098 35.0 33.0 39.0 23.5 40.5 66-67 33.35223323825775 35.0 33.0 38.5 22.5 40.0 68-69 32.85796976075602 35.0 32.5 37.5 21.0 40.0 70-71 32.54086773359663 35.0 32.5 37.0 20.0 39.5 72-73 32.237759396120964 35.0 32.0 37.0 19.5 39.0 74-75 31.91372541914971 35.0 32.0 36.0 19.0 39.0 76-77 29.857268441511533 33.0 29.0 34.5 14.0 36.0 78-79 30.97394913928101 34.0 31.0 35.0 17.0 37.0 80-81 31.093215447536508 35.0 31.0 35.0 16.5 37.0 82-83 30.87408821421333 35.0 31.0 35.0 15.0 36.5 84-85 30.617523271626673 34.0 31.0 35.0 11.5 36.0 86 30.176489854012367 34.0 30.0 35.0 10.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 4.0 10 13.0 11 20.0 12 41.0 13 157.0 14 527.0 15 1717.0 16 4405.0 17 10030.0 18 20850.0 19 30818.0 20 33712.0 21 32362.0 22 28479.0 23 26267.0 24 27373.0 25 31136.0 26 36681.0 27 44792.0 28 54475.0 29 67498.0 30 83331.0 31 102783.0 32 123331.0 33 154243.0 34 314362.0 35 312633.0 36 314114.0 37 508705.0 38 749920.0 39 416209.0 40 1637.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.457664945190942 23.042335620959804 31.97124067408173 14.528758759767516 2 29.659930227581278 25.610140665815926 31.559960460031455 13.169968646571334 3 26.857965231549997 24.93319421122179 35.289705001488976 12.919135555739238 4 25.47964291739747 26.670682562670056 34.507397891881055 13.342276628051412 5 23.604636548201512 31.53255876361734 31.73645795707898 13.12634673110217 6 22.41549350794932 39.98521780385594 27.365151383049675 10.234137305145065 7 88.21441148063141 2.9053724309494235 7.518510298848337 1.3617057895708238 8 88.91417381054558 2.324586681643241 7.234812156841876 1.5264273509693067 9 84.59110328061715 5.460778774328913 8.194805680077268 1.753312264976669 10-11 34.31083035066245 32.20709907751396 22.653234362633146 10.828836209190438 12-13 25.497377589715082 24.440359981294378 32.56892602334579 17.49333640564475 14-15 15.82319168618943 31.16715091427685 35.81046461727643 17.19919278225729 16-17 20.978475514546112 29.544492089175538 32.733661738513085 16.743370657765265 18-19 21.546876716144467 30.451239134151685 31.323111292782595 16.67877285692125 20-21 23.65662334103676 30.076829487848705 31.62515271916545 14.641394451949088 22-23 20.141619779948524 25.653904118973188 34.54380138525766 19.66067471582063 24-25 18.11729114981821 29.998644068948106 34.591542047450226 17.29252273378346 26-27 17.603693341048082 34.62354371872725 30.36239592733795 17.410367012886724 28-29 16.229135929398737 30.570088330840385 35.19469075147454 18.006084988286343 30-31 20.223456871201837 30.167852375059024 32.044712887968956 17.563977865770187 32-33 22.212146311471233 29.950790176605064 30.753648558523572 17.08341495340013 34-35 18.933411613110692 30.101159816431277 31.576350524312215 19.389078046145816 36-37 20.258685601767297 31.302220330020596 30.902942511920305 17.536151556291806 38-39 18.693972306169798 32.24648901610925 29.82978960705741 19.22974907066354 40-41 19.54844948293452 29.70343891289997 30.6112616443056 20.136849959859912 42-43 19.33409065432307 29.76735733284116 30.14244636004697 20.756105652788804 44-45 19.18783976122026 31.577482825816926 29.490693613932745 19.743983799030072 46-47 19.558045738186983 31.38029251877073 29.420278614108252 19.641383128934038 48-49 19.78365681300154 29.4882450119288 31.617905989535274 19.110192185534395 50-51 18.3605236667999 31.373781785118616 29.95766890824621 20.30802563983527 52-53 19.911507806652722 29.39509905939714 31.16205555750563 19.531337576444503 54-55 19.697531129799117 29.784172010186182 31.34838992387537 19.169906936139327 56-57 19.96967979645748 29.011447002061917 30.549692749986697 20.4691804514939 58-59 20.94955936486944 29.9981628408086 29.7476411328903 19.30463666143166 60-61 21.047291138495194 31.270742348189508 28.728017781662828 18.95394873165247 62-63 20.260553899250077 29.964575947424976 30.760923595691363 19.01394655763358 64-65 19.042947629923106 32.224126061391125 30.242938118590466 18.489988190095303 66-67 18.42213502242523 31.80984524835335 27.958236757450827 21.80978297177059 68-69 17.777232700414537 33.29110792305332 27.907509650039575 21.02414972649257 70-71 18.543744204031672 32.10282826269848 29.55611233336768 19.79731519990217 72-73 20.077941974077092 31.893380791863734 28.664637204936383 19.364040029122794 74-75 19.20190860741635 33.16530922587943 27.329257425350196 20.30352474135403 76-77 21.1102895634638 31.17428441375656 28.13599393992235 19.579432082857295 78-79 18.032142076663607 31.861662195962893 29.882186859188113 20.224008868185383 80-81 17.168691410474015 31.03502548244536 30.19692421619259 21.59935889088803 82-83 18.22739331738298 30.656865087408015 30.297755665187502 20.8179859300215 84-85 17.62155539728497 30.37015219264525 29.309709372172783 22.698583037897 86 18.331933053805834 30.811424242801678 29.758751841405324 21.097890861987167 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2450.0 1 3150.5 2 15418.0 3 16268.5 4 6209.0 5 8590.0 6 12401.0 7 14488.0 8 15827.0 9 17204.5 10 16894.0 11 16128.0 12 14899.0 13 13819.0 14 13551.0 15 13332.5 16 13093.5 17 12927.0 18 13021.0 19 13864.0 20 15910.5 21 17354.0 22 17697.5 23 19967.0 24 24539.0 25 29183.0 26 34529.0 27 42518.5 28 51377.0 29 55594.0 30 59757.5 31 71398.0 32 81682.0 33 91384.5 34 101441.0 35 111016.5 36 117431.0 37 119967.0 38 130140.0 39 142213.0 40 154031.5 41 170379.5 42 179553.0 43 179761.0 44 177822.5 45 176908.5 46 175374.5 47 169478.5 48 159904.5 49 143153.5 50 132639.0 51 121683.5 52 100203.5 53 82721.0 54 72494.5 55 65978.0 56 56769.0 57 50808.0 58 43775.5 59 32053.0 60 23984.0 61 18669.0 62 14609.5 63 9726.0 64 6966.0 65 5680.5 66 3391.0 67 1892.0 68 1109.5 69 756.5 70 605.0 71 519.0 72 384.0 73 180.0 74 105.0 75 79.5 76 47.5 77 35.0 78 28.5 79 22.0 80 20.0 81 18.5 82 13.0 83 5.5 84 3.0 85 2.0 86 2.0 87 3.0 88 2.5 89 1.0 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3532628.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.0314033702535 #Duplication Level Percentage of deduplicated Percentage of total 1 77.76513619789664 14.022145389269758 2 8.670702398608311 3.12689864905462 3 2.8852945048141043 1.5607772717483686 4 1.5718648049606325 1.1337171336700003 5 1.0516456934323146 0.9481323850434008 6 0.7476801855714349 0.808903381079072 7 0.6169919529912141 0.7787661546409548 8 0.49672292595766526 0.716528915295618 9 0.34941451965854403 0.5670390732647921 >10 3.2586675697656795 13.198493548818668 >50 1.1044703403549345 14.397414649784789 >100 1.473148074745002 46.05396049198783 >500 0.0050835884576466124 0.6166424894860644 >1k 0.003018380646727676 0.8337721438877167 >5k 0.0 0.0 >10k+ 1.5886213930145664E-4 1.236808322968356 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 43177 1.2222345517274957 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGACCTATCGTATGC 3536 0.10009545301684752 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 2.830753761788674E-5 0.0 0.0 0.05582246418247265 0.0 2 2.830753761788674E-5 0.0 0.0 0.1805737824644995 0.0 3 2.830753761788674E-5 0.0 0.0 0.26311856215825724 0.0 4 2.830753761788674E-5 0.0 0.0 0.39440892163001595 0.0 5 2.830753761788674E-5 0.0 0.0 0.7114816504879653 0.0 6 2.830753761788674E-5 0.0 0.0 0.9832906266949138 0.0 7 2.830753761788674E-5 0.0 0.0 1.2000131346974547 0.0 8 5.661507523577348E-5 0.0 0.0 1.601810323645739 0.0 9 5.661507523577348E-5 0.0 0.0 1.7578980860707665 0.0 10 5.661507523577348E-5 0.0 0.0 2.0068628794200807 0.0 11 5.661507523577348E-5 0.0 0.0 2.4623028521542603 0.0 12 5.661507523577348E-5 0.0 0.0 2.7790075830231773 0.0 13 5.661507523577348E-5 0.0 0.0 2.8846230058755125 0.0 14 5.661507523577348E-5 0.0 0.0 2.928895994709887 0.0 15 5.661507523577348E-5 0.0 0.0 2.994286406607206 0.0 16 5.661507523577348E-5 0.0 0.0 3.1238216987466556 0.0 17 5.661507523577348E-5 0.0 0.0 3.31410496661409 0.0 18 8.492261285366022E-5 0.0 0.0 3.5157112495286795 0.0 19 8.492261285366022E-5 0.0 0.0 3.6731860812969837 0.0 20 8.492261285366022E-5 0.0 0.0 3.834793813557499 0.0 21 8.492261285366022E-5 0.0 0.0 4.021114026158429 2.830753761788674E-5 22 8.492261285366022E-5 0.0 0.0 4.2431866587707505 2.830753761788674E-5 23 8.492261285366022E-5 0.0 0.0 4.463532531588381 2.830753761788674E-5 24 8.492261285366022E-5 0.0 0.0 4.624206115107507 2.830753761788674E-5 25 8.492261285366022E-5 0.0 0.0 4.765319190132672 2.830753761788674E-5 26 8.492261285366022E-5 0.0 0.0 4.895901861163983 2.830753761788674E-5 27 8.492261285366022E-5 0.0 0.0 5.036958321113913 2.830753761788674E-5 28 8.492261285366022E-5 0.0 0.0 5.19049840515333 2.830753761788674E-5 29 8.492261285366022E-5 0.0 0.0 5.364618069040952 2.830753761788674E-5 30 8.492261285366022E-5 0.0 0.0 5.579160896646916 2.830753761788674E-5 31 8.492261285366022E-5 0.0 0.0 5.7570171555000975 2.830753761788674E-5 32 8.492261285366022E-5 0.0 0.0 5.920578107856247 2.830753761788674E-5 33 8.492261285366022E-5 0.0 0.0 6.087252889350364 2.830753761788674E-5 34 8.492261285366022E-5 0.0 0.0 6.267373751212978 2.830753761788674E-5 35 8.492261285366022E-5 0.0 0.0 6.465073593936299 2.830753761788674E-5 36 8.492261285366022E-5 0.0 0.0 6.651846727139116 2.830753761788674E-5 37 8.492261285366022E-5 0.0 0.0 6.839525701545705 2.830753761788674E-5 38 8.492261285366022E-5 0.0 0.0 7.0546912949792615 2.830753761788674E-5 39 8.492261285366022E-5 0.0 0.0 7.326160580734796 2.830753761788674E-5 40 8.492261285366022E-5 0.0 0.0 7.548884286712329 2.830753761788674E-5 41 8.492261285366022E-5 0.0 0.0 7.772004298216512 2.830753761788674E-5 42 8.492261285366022E-5 0.0 0.0 7.997502142880598 2.830753761788674E-5 43 8.492261285366022E-5 0.0 0.0 8.21422465088314 2.830753761788674E-5 44 8.492261285366022E-5 0.0 0.0 8.431315156874712 2.830753761788674E-5 45 8.492261285366022E-5 0.0 0.0 8.647046901060627 2.830753761788674E-5 46 8.492261285366022E-5 0.0 0.0 8.873393971853249 2.830753761788674E-5 47 8.492261285366022E-5 0.0 0.0 9.112819125025336 2.830753761788674E-5 48 1.1323015047154696E-4 0.0 0.0 9.345252316405803 2.830753761788674E-5 49 1.415376880894337E-4 0.0 0.0 9.588215911780125 2.830753761788674E-5 50 1.415376880894337E-4 0.0 0.0 9.839275462913163 2.830753761788674E-5 51 1.415376880894337E-4 0.0 0.0 10.09596821403216 2.830753761788674E-5 52 1.415376880894337E-4 0.0 0.0 10.377741443480604 2.830753761788674E-5 53 1.415376880894337E-4 0.0 0.0 10.645077828743927 2.830753761788674E-5 54 1.415376880894337E-4 0.0 0.0 10.905592097441339 2.830753761788674E-5 55 1.6984522570732044E-4 0.0 0.0 11.173749401295579 2.830753761788674E-5 56 1.6984522570732044E-4 0.0 0.0 11.435622431798649 2.830753761788674E-5 57 1.6984522570732044E-4 0.0 0.0 11.7132910682925 2.830753761788674E-5 58 1.6984522570732044E-4 0.0 0.0 11.980882221394385 2.830753761788674E-5 59 1.9815276332520718E-4 0.0 0.0 12.259654851855332 2.830753761788674E-5 60 1.9815276332520718E-4 0.0 0.0 12.566791635009404 2.830753761788674E-5 61 1.9815276332520718E-4 0.0 0.0 12.865096466426694 2.830753761788674E-5 62 1.9815276332520718E-4 0.0 0.0 13.197030652534034 2.830753761788674E-5 63 1.9815276332520718E-4 0.0 0.0 13.517188902992332 2.830753761788674E-5 64 1.9815276332520718E-4 0.0 0.0 13.835252395666908 2.830753761788674E-5 65 2.2646030094309393E-4 0.0 0.0 14.134463068287971 2.830753761788674E-5 66 2.2646030094309393E-4 0.0 0.0 14.428748229363523 2.830753761788674E-5 67 2.5476783856098067E-4 0.0 0.0 14.72883643565074 2.830753761788674E-5 68 3.1138291379675416E-4 0.0 0.0 15.051429134344177 2.830753761788674E-5 69 3.1138291379675416E-4 0.0 0.0 15.458265064988446 2.830753761788674E-5 70 3.1138291379675416E-4 0.0 0.0 15.778819620973394 2.830753761788674E-5 71 3.1138291379675416E-4 0.0 0.0 16.095496044304692 2.830753761788674E-5 72 3.396904514146409E-4 0.0 0.0 16.41571090983823 2.830753761788674E-5 73 3.6799798903252765E-4 0.0 0.0 16.732160872868583 2.830753761788674E-5 74 3.9630552665041437E-4 0.0 0.0 17.085297404651723 2.830753761788674E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 16915 0.0 74.18267 1 TACGGGA 1635 0.0 70.94801 4 CGGGATA 1415 0.0 69.25795 6 ACGGGAT 2255 0.0 67.93792 5 TATAGCG 355 0.0 67.60563 1 TAGGGCG 385 0.0 66.49351 5 CGAGGGA 2895 0.0 66.45941 4 TAGGGAT 8975 0.0 66.362114 5 AGGGATC 6835 0.0 64.608635 6 AGGGACC 4225 0.0 64.56805 6 GTACGGG 1270 0.0 64.25197 3 GCGGGAT 3335 0.0 64.04797 5 TAGGGAC 4745 0.0 63.98314 5 AGCGGGA 3090 0.0 63.818768 4 CGGGGTA 765 0.0 63.790848 6 GGGACCG 1390 0.0 63.309353 7 CGTAAGG 500 0.0 63.2 2 TAGGGGT 4915 0.0 63.072227 5 GAGGGAT 8430 0.0 62.918148 5 GTAGGGA 6555 0.0 62.85278 4 >>END_MODULE