##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547783_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2781317 Sequences flagged as poor quality 0 Sequence length 86 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.912214968664127 31.0 31.0 33.0 31.0 34.0 2 32.371019916104494 33.0 31.0 34.0 31.0 34.0 3 32.508444380845475 34.0 31.0 34.0 31.0 34.0 4 36.09002965142053 37.0 35.0 37.0 35.0 37.0 5 36.057082310286816 37.0 35.0 37.0 35.0 37.0 6 36.110863306843484 37.0 35.0 37.0 35.0 37.0 7 36.31452617590875 37.0 36.0 37.0 35.0 37.0 8 36.270574695369135 37.0 37.0 37.0 35.0 37.0 9 38.15339172054102 39.0 39.0 39.0 37.0 39.0 10-11 37.68665671694381 39.0 37.5 39.0 35.0 39.0 12-13 36.90963777232153 39.0 35.0 39.0 33.5 39.0 14-15 38.018770603998036 40.0 35.0 41.0 33.0 41.0 16-17 38.19426660103829 40.0 35.0 41.0 34.0 41.0 18-19 38.09316989037927 40.0 36.0 41.0 34.0 41.0 20-21 37.893977025991646 40.0 35.0 41.0 34.0 41.0 22-23 37.67957014608547 39.5 35.0 41.0 34.0 41.0 24-25 37.56718543769013 39.0 35.0 41.0 34.0 41.0 26-27 37.46549997716909 39.0 35.0 41.0 34.0 41.0 28-29 37.40632279599916 39.0 35.0 41.0 34.0 41.0 30-31 37.215552560172036 39.0 35.0 41.0 33.0 41.0 32-33 36.908404543602906 39.0 35.0 41.0 33.0 41.0 34-35 36.64580808300528 38.0 35.0 41.0 32.5 41.0 36-37 36.4270690827403 38.0 35.0 41.0 32.0 41.0 38-39 36.325586583622076 38.0 35.0 41.0 31.0 41.0 40-41 36.188842551927735 38.0 35.0 41.0 31.0 41.0 42-43 36.1363760405592 38.0 35.0 41.0 31.0 41.0 44-45 36.02259361302578 38.0 35.0 40.5 31.0 41.0 46-47 35.951174749228514 38.0 35.0 40.0 31.0 41.0 48-49 35.84157415353949 37.0 35.0 40.0 31.0 41.0 50-51 35.66544086848065 37.0 35.0 40.0 30.0 41.0 52-53 35.50526351365198 36.5 35.0 40.0 30.0 41.0 54-55 35.3305417900944 36.0 35.0 40.0 29.5 41.0 56-57 35.04428855107131 36.0 34.5 40.0 28.5 41.0 58-59 34.74834386012094 35.5 34.0 39.5 28.0 41.0 60-61 34.426914659494045 35.0 34.0 39.0 27.0 41.0 62-63 33.96634921513801 35.0 33.5 39.0 26.0 40.5 64-65 33.62470369253127 35.0 33.0 38.0 26.0 40.0 66-67 33.29332830454062 35.0 33.0 37.0 24.5 40.0 68-69 32.862295272347595 35.0 33.0 37.0 22.5 39.5 70-71 32.5546027295702 35.0 33.0 36.0 21.5 39.0 72-73 32.243162501793215 35.0 33.0 36.0 20.0 39.0 74-75 31.94856645251153 35.0 33.0 35.5 19.5 38.0 76-77 29.959539851084934 33.0 29.5 34.5 16.0 36.0 78-79 30.969528464392948 34.0 31.0 35.0 17.5 37.0 80-81 31.213087001589535 35.0 32.0 35.0 17.5 36.0 82-83 31.04694790273816 35.0 32.0 35.0 16.0 36.0 84-85 30.82990252459536 35.0 32.0 35.0 13.5 36.0 86 30.448344075846084 34.0 31.0 35.0 11.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 8.0 9 17.0 10 8.0 11 22.0 12 56.0 13 103.0 14 310.0 15 910.0 16 2260.0 17 5538.0 18 11332.0 19 17494.0 20 20302.0 21 20854.0 22 18722.0 23 17586.0 24 18668.0 25 21724.0 26 26176.0 27 32233.0 28 40054.0 29 50381.0 30 64997.0 31 80348.0 32 99064.0 33 129900.0 34 332482.0 35 356444.0 36 255949.0 37 370938.0 38 519089.0 39 266016.0 40 1331.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.710127612206733 24.471356555185906 30.609671605214366 14.208844227392994 2 30.088911116568156 24.78358274155733 31.606501524277885 13.521004617596628 3 28.602888487720023 24.716959627399536 33.406871636710235 13.273280248170202 4 25.39527137683335 28.03553136877242 32.817079103173064 13.752118151221165 5 24.35889184871771 31.760816907961225 30.65882098300913 13.221470260311932 6 22.212318840319174 40.386874275747786 26.824486385406626 10.576320498526417 7 86.37127662902144 4.531666113571377 7.2955725650833765 1.8014846923238164 8 87.38252417829395 3.6760642530139496 6.902413496915311 2.038998071776788 9 82.60263033663549 6.274401659357778 8.410116502362012 2.7128515016447246 10-11 41.57604113446975 27.365201449529124 19.581011441701897 11.477745974299227 12-13 28.40618311397083 29.986909079403752 25.648550668622093 15.958357138003326 14-15 15.108489970758457 35.807712677123824 33.76752811707547 15.316269235042249 16-17 18.065020995449277 30.318550528400756 32.10322663687742 19.513201839272547 18-19 22.0426510174856 32.48049395304455 28.9089305534033 16.567924476066555 20-21 24.397111152738074 33.03496149486017 27.547848734969797 15.02007861743196 22-23 19.240057857482622 30.89511192000049 28.942421881432427 20.92240834108446 24-25 17.357208833081593 32.190469479027385 33.32266692361927 17.129654764271745 26-27 15.893136237257385 40.262580640754 27.318658750512796 16.525624371475814 28-29 15.278930808678048 33.786889448415984 34.03315767314549 16.901022069760476 30-31 20.74438116906487 35.16819549875113 28.186107516690832 15.901315815493163 32-33 24.53673924978706 33.766359605898934 25.938359417498972 15.75854172681503 34-35 18.217862257340677 34.57007957021799 28.13178073552925 19.080277436912084 36-37 21.73953921829119 35.26268311019564 27.92804631762579 15.069731353887386 38-39 18.77218598239611 37.024941781177766 25.89427958050089 18.30859265592523 40-41 19.348945122041105 32.80978040259345 27.176693631110727 20.66458084425472 42-43 20.09404177948792 31.10023057422077 26.981785966863896 21.82394167942741 44-45 17.76162156273449 37.313707858543275 26.04544897255509 18.87922160616715 46-47 19.832241344657945 35.64437279173859 26.48148341235465 18.041902451248816 48-49 19.96942455678371 31.70037791449159 29.982900187213467 18.347297341511233 50-51 17.474041973640546 36.76736596367836 27.309005050485073 18.44958701219602 52-53 20.597292577581054 31.78647022256003 28.872059531509713 18.744177668349202 54-55 20.836423895586158 32.69580562014326 28.935572608228405 17.532197876042176 56-57 21.53278464842375 30.390135320785085 27.790503563599543 20.286576467191622 58-59 22.477355152253413 32.72796664314065 26.866426948096887 17.928251256509057 60-61 22.34288648147622 35.13664569698456 25.245432289810903 17.275035531728314 62-63 21.23371769560967 31.849264215477774 29.419390166600927 17.497627922311622 64-65 17.982524106385572 36.08630371870592 28.97790866700919 16.953263507899315 66-67 16.876609174718308 35.09118162366965 24.36536360292624 23.6668455986858 68-69 16.3401367050214 37.670732965713725 24.022126927638958 21.96700340162592 70-71 17.915954923512853 35.50760305279837 27.545817323232125 19.030624700456656 72-73 20.84580793918852 35.83773442581338 25.48603772960795 17.830419905390144 74-75 20.077592737541245 37.515950177559766 23.058105206993666 19.348351877905323 76-77 24.784445642118463 33.0976656023028 24.35650089507956 17.76138786049918 78-79 18.03940363504052 34.437876013413785 28.940444400979825 18.582275950565865 80-81 15.616648515793058 33.51525554260805 29.887783377443135 20.98031256415576 82-83 17.49112021391305 31.589135650485005 30.37009085983367 20.54965327576828 84-85 16.104564851830986 31.51533967541276 28.611679287186607 23.76841618556964 86 16.861832002608836 31.49856704575566 30.25750031370031 21.382100637935196 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 3172.0 1 4323.0 2 16214.0 3 16382.0 4 7956.5 5 15611.5 6 27211.5 7 33303.0 8 35071.5 9 34246.0 10 27329.0 11 19949.0 12 14945.0 13 12295.5 14 11593.0 15 10970.0 16 10014.5 17 9608.0 18 9429.5 19 9111.0 20 9204.5 21 9512.0 22 9810.5 23 11390.5 24 12950.5 25 15793.5 26 20757.5 27 24638.0 28 34693.0 29 43267.0 30 42683.0 31 46555.5 32 51005.5 33 53702.0 34 57835.0 35 67020.5 36 74776.0 37 78294.5 38 85859.0 39 94641.0 40 103938.5 41 119256.0 42 133734.5 43 137457.0 44 143509.0 45 149514.5 46 151859.0 47 155100.5 48 149399.5 49 129183.0 50 115518.0 51 97359.5 52 73351.5 53 64929.0 54 58749.5 55 54699.5 56 50005.5 57 45755.0 58 41854.0 59 31514.5 60 20606.5 61 15309.0 62 12959.0 63 9450.0 64 7463.0 65 6181.5 66 3763.0 67 2269.5 68 1410.0 69 759.5 70 591.5 71 571.0 72 403.5 73 154.0 74 80.5 75 79.0 76 67.0 77 63.5 78 49.5 79 37.0 80 26.5 81 15.0 82 10.0 83 4.5 84 3.0 85 3.0 86 3.0 87 2.5 88 3.0 89 2.5 90 1.0 91 1.5 92 1.5 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2781317.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.085808991320413 #Duplication Level Percentage of deduplicated Percentage of total 1 75.7538091607278 11.428074953636779 2 9.39011362499467 2.833149211069298 3 3.304974623609311 1.4957464767879343 4 1.7438651271433598 1.0523046485883762 5 1.2170436395608453 0.918004394025816 6 0.9374238490455122 0.8485078278365387 7 0.7600097759289894 0.8025753617840673 8 0.629330668078605 0.7595169800811122 9 0.5338699009850151 0.7248473417227572 >10 3.453108776370876 9.92212266422322 >50 0.6521529467123639 7.113446174177036 >100 1.5788848442052612 56.053422091082524 >500 0.04156857056227078 3.7163565162551664 >1k 0.0036042113204281015 1.0427184739975237 >5k 0.0 0.0 >10k+ 2.4028075469520682E-4 1.2892068847318334 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 35566 1.2787467232250045 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCTACGAAGGTCGTATGC 4288 0.15417156692315187 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3780 0.13590683837908443 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3321 0.11940386514733847 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.595419004737684E-5 0.0 0.0 0.07043425830281122 0.0 2 3.595419004737684E-5 0.0 0.0 0.22478559617619998 0.0 3 3.595419004737684E-5 0.0 0.0 0.33282793726856735 0.0 4 3.595419004737684E-5 0.0 0.0 0.49440606734147885 0.0 5 3.595419004737684E-5 0.0 0.0 0.8936773478175987 0.0 6 3.595419004737684E-5 0.0 0.0 1.2226581867510966 0.0 7 3.595419004737684E-5 0.0 0.0 1.478292477987946 0.0 8 3.595419004737684E-5 0.0 0.0 1.9423172547393914 0.0 9 3.595419004737684E-5 0.0 0.0 2.109468284269646 0.0 10 3.595419004737684E-5 0.0 0.0 2.366972193388959 0.0 11 3.595419004737684E-5 0.0 0.0 2.8830586373290066 0.0 12 3.595419004737684E-5 0.0 0.0 3.21265069749331 0.0 13 3.595419004737684E-5 0.0 0.0 3.3142212843771492 0.0 14 3.595419004737684E-5 0.0 0.0 3.353123718008411 0.0 15 3.595419004737684E-5 0.0 0.0 3.4142458410889516 0.0 16 3.595419004737684E-5 0.0 0.0 3.547923519685099 0.0 17 3.595419004737684E-5 0.0 0.0 3.7247821805281456 0.0 18 3.595419004737684E-5 0.0 0.0 3.912786640285879 0.0 19 3.595419004737684E-5 0.0 0.0 4.040747602664493 0.0 20 3.595419004737684E-5 0.0 0.0 4.152996583992404 0.0 21 3.595419004737684E-5 0.0 0.0 4.293829146407979 0.0 22 3.595419004737684E-5 0.0 0.0 4.454400559159564 0.0 23 3.595419004737684E-5 0.0 0.0 4.616482047893139 0.0 24 3.595419004737684E-5 0.0 0.0 4.739589194615356 0.0 25 3.595419004737684E-5 0.0 0.0 4.841735048539954 0.0 26 3.595419004737684E-5 0.0 0.0 4.937121514735645 0.0 27 3.595419004737684E-5 0.0 0.0 5.033011339591999 0.0 28 3.595419004737684E-5 0.0 0.0 5.1348695599962175 0.0 29 3.595419004737684E-5 0.0 0.0 5.257401439677678 0.0 30 3.595419004737684E-5 0.0 0.0 5.395825071360079 0.0 31 3.595419004737684E-5 0.0 0.0 5.525619697431109 0.0 32 3.595419004737684E-5 0.0 0.0 5.641320281003567 0.0 33 3.595419004737684E-5 0.0 0.0 5.757775902567022 0.0 34 3.595419004737684E-5 0.0 0.0 5.885952590085919 0.0 35 3.595419004737684E-5 0.0 0.0 6.038110722366419 0.0 36 3.595419004737684E-5 0.0 0.0 6.1742692400758346 0.0 37 3.595419004737684E-5 0.0 0.0 6.315856840482405 0.0 38 3.595419004737684E-5 0.0 0.0 6.468770010753898 0.0 39 3.595419004737684E-5 0.0 0.0 6.667956223616366 0.0 40 3.595419004737684E-5 0.0 0.0 6.838163359300648 0.0 41 3.595419004737684E-5 0.0 0.0 7.006069426821898 0.0 42 3.595419004737684E-5 0.0 0.0 7.171099159139358 0.0 43 3.595419004737684E-5 0.0 0.0 7.316102407600428 0.0 44 3.595419004737684E-5 0.0 0.0 7.47670977454206 0.0 45 3.595419004737684E-5 0.0 0.0 7.634656531420187 0.0 46 3.595419004737684E-5 0.0 0.0 7.8100770246613385 0.0 47 3.595419004737684E-5 0.0 0.0 7.995277057595376 0.0 48 3.595419004737684E-5 0.0 0.0 8.176809763144583 0.0 49 3.595419004737684E-5 0.0 0.0 8.370063534649233 0.0 50 3.595419004737684E-5 0.0 0.0 8.557241048035877 0.0 51 3.595419004737684E-5 0.0 0.0 8.7522206206628 0.0 52 3.595419004737684E-5 0.0 0.0 8.978444384440897 0.0 53 3.595419004737684E-5 0.0 0.0 9.170080217393414 0.0 54 3.595419004737684E-5 0.0 0.0 9.37476742133313 0.0 55 3.595419004737684E-5 0.0 0.0 9.589917294576635 0.0 56 7.190838009475368E-5 0.0 0.0 9.795790986787914 0.0 57 7.190838009475368E-5 0.0 0.0 10.010437501370754 0.0 58 1.078625701421305E-4 0.0 0.0 10.213938217038907 0.0 59 1.078625701421305E-4 0.0 0.0 10.428764502571983 0.0 60 1.078625701421305E-4 0.0 0.0 10.659949944576615 0.0 61 1.078625701421305E-4 0.0 0.0 10.89577347709736 0.0 62 1.4381676018950735E-4 0.0 0.0 11.146697769438004 0.0 63 1.4381676018950735E-4 0.0 0.0 11.423545032802805 0.0 64 1.4381676018950735E-4 0.0 0.0 11.674828867043923 0.0 65 1.4381676018950735E-4 0.0 0.0 11.916800566062768 0.0 66 1.4381676018950735E-4 0.0 0.0 12.136013262781624 0.0 67 1.4381676018950735E-4 0.0 0.0 12.378380457890993 0.0 68 1.4381676018950735E-4 0.0 0.0 12.636423679861016 0.0 69 1.4381676018950735E-4 0.0 0.0 12.971516731102568 0.0 70 1.7977095023688418E-4 0.0 0.0 13.216904078175915 0.0 71 1.7977095023688418E-4 0.0 0.0 13.462830738099973 0.0 72 1.7977095023688418E-4 0.0 0.0 13.712892129879478 0.0 73 1.7977095023688418E-4 0.0 0.0 13.97877336527983 0.0 74 1.7977095023688418E-4 0.0 0.0 14.260330627540837 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 10575 0.0 75.007095 1 GCGCGAC 70 0.0 74.28571 9 TACGCGG 125 0.0 70.4 2 TGCGTAG 215 0.0 68.83721 1 CGGGATA 965 0.0 67.564766 6 GAACGAC 120 0.0 66.66667 9 TCGCGCG 30 3.7970003E-6 66.66667 1 CGGGACG 90 0.0 66.666664 6 CGGGAGT 865 0.0 65.664734 6 TATTGCG 385 0.0 65.454544 1 CGAACGG 215 0.0 65.11628 2 ATTGCGG 835 0.0 64.67066 2 ATAACGG 230 0.0 64.347824 2 GTTAGCG 255 0.0 64.31373 1 AGGGATC 3065 0.0 63.55628 6 TAGGGCG 605 0.0 63.471073 5 ATAGGGA 3235 0.0 63.431225 4 AGGGATT 4650 0.0 63.139786 6 TTGTGCG 330 0.0 63.030304 1 GATTGCG 255 0.0 62.7451 1 >>END_MODULE