##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547782_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3161636 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.756885043059984 31.0 31.0 33.0 30.0 34.0 2 32.20175820366418 33.0 31.0 34.0 31.0 34.0 3 32.36354026839269 34.0 31.0 34.0 30.0 34.0 4 35.95879253652223 37.0 35.0 37.0 35.0 37.0 5 35.91217426674039 37.0 35.0 37.0 35.0 37.0 6 35.95954436247563 37.0 35.0 37.0 35.0 37.0 7 36.22597952452465 37.0 35.0 37.0 35.0 37.0 8 36.18578198122744 37.0 35.0 37.0 35.0 37.0 9 38.05831632736975 39.0 39.0 39.0 35.0 39.0 10-11 37.481139669462266 39.0 37.0 39.0 35.0 39.0 12-13 36.719487948644314 39.0 35.0 39.0 33.0 39.0 14-15 37.80283609498373 40.0 35.0 41.0 33.0 41.0 16-17 37.937501344240765 40.0 35.0 41.0 33.5 41.0 18-19 37.83420339975886 40.0 36.0 41.0 33.5 41.0 20-21 37.66100857277688 40.0 35.0 41.0 33.5 41.0 22-23 37.45153679930264 39.0 35.0 41.0 33.0 41.0 24-25 37.37499683708055 39.0 35.0 41.0 33.0 41.0 26-27 37.34290079566402 39.0 35.0 41.0 33.0 41.0 28-29 37.36158257939877 39.0 35.0 41.0 33.0 41.0 30-31 37.211970005402264 39.0 35.0 41.0 33.0 41.0 32-33 36.90549038535745 39.0 35.0 41.0 32.0 41.0 34-35 36.64230227641639 39.0 35.0 41.0 31.0 41.0 36-37 36.457106700455086 39.0 35.0 41.0 31.0 41.0 38-39 36.363407267629796 39.0 35.0 41.0 31.0 41.0 40-41 36.20051422744427 38.0 35.0 41.0 30.0 41.0 42-43 36.15220268873456 38.0 35.0 41.0 30.0 41.0 44-45 36.055675605920484 38.0 35.0 41.0 30.0 41.0 46-47 35.94302728081284 38.0 35.0 40.5 30.0 41.0 48-49 35.852294824578166 38.0 35.0 40.0 30.0 41.0 50-51 35.66828676672457 38.0 35.0 40.0 29.0 41.0 52-53 35.49459457065899 37.0 35.0 40.0 29.0 41.0 54-55 35.30919593526896 37.0 34.5 40.0 28.5 41.0 56-57 35.00330019015472 36.0 34.0 40.0 27.5 41.0 58-59 34.71899943573517 36.0 34.0 40.0 27.0 41.0 60-61 34.39281878116266 35.5 34.0 39.0 26.0 41.0 62-63 33.97635417233356 35.0 33.5 39.0 26.0 40.5 64-65 33.701977235836125 35.0 33.0 38.5 26.0 40.0 66-67 33.43934927992976 35.0 33.0 38.0 25.0 40.0 68-69 33.07028687046832 35.0 33.0 37.0 24.0 40.0 70-71 32.814128824444055 35.0 33.0 36.5 24.0 39.0 72-73 32.5457699747852 35.0 33.0 36.0 23.5 39.0 74-75 32.24855612727082 35.0 32.5 36.0 23.0 38.5 76-77 30.193773729803176 33.0 29.5 34.5 19.5 36.0 78-79 31.29704194284225 34.0 31.0 35.0 20.0 37.0 80-81 31.53941851623653 35.0 32.0 35.0 20.0 36.5 82-83 31.385454872097863 35.0 32.0 35.0 20.0 36.0 84-85 31.211652131997482 34.0 32.0 35.0 19.0 36.0 86 30.785260226034875 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 14.0 10 13.0 11 22.0 12 51.0 13 129.0 14 446.0 15 1357.0 16 3448.0 17 7451.0 18 14700.0 19 21939.0 20 25439.0 21 24853.0 22 22059.0 23 20900.0 24 22507.0 25 26235.0 26 31307.0 27 37706.0 28 46284.0 29 57717.0 30 71705.0 31 89024.0 32 110074.0 33 146874.0 34 355825.0 35 337290.0 36 273483.0 37 468785.0 38 640760.0 39 301786.0 40 1448.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.642225733765684 23.058631670438974 32.086837320931316 13.212305274864026 2 29.558810691679877 25.43325670633811 31.196348978819827 13.811583623162186 3 28.871539924267058 25.283650616326486 32.534358793991466 13.310450665414994 4 26.278230637556 28.209319478902696 31.329919067217098 14.182530816324206 5 24.47207711450654 32.13949992978319 29.43191436332329 13.95650859238698 6 21.958599914727692 41.46154079723283 26.147001109552143 10.43285817848734 7 88.47416337617614 3.9145556287947127 6.069610796435769 1.5416701985933865 8 89.45447863068361 3.1471997408936385 5.736650265875009 1.6616713625477442 9 84.6252066967861 5.849155310731533 7.247481999825407 2.2781559926569663 10-11 40.56316097109218 26.629694246902552 20.209284054204847 12.597860727800416 12-13 29.006153776083014 27.826036899883476 25.986609464214094 17.18119985981941 14-15 17.04247421271772 32.773522948245784 33.63782231730661 16.546180521729887 16-17 21.353644126015773 25.288869433419915 32.76408163368585 20.593404806878464 18-19 24.179301475565182 28.307464869453664 29.3218447664437 18.191388888537453 20-21 26.756464058481118 28.397592259197452 28.141775334035923 16.70416834828551 22-23 22.00427247159382 25.215110151832786 30.225807145414592 22.554810231158807 24-25 19.69102388763286 26.981031339471084 34.57183243105785 18.756112341838215 26-27 18.262981570300944 34.597404634815646 28.861798132359322 18.277815662524084 28-29 16.80003643683207 29.293615710347424 35.74595557489857 18.160392277921936 30-31 22.362710318328865 29.750151503841682 29.63968654203077 18.24745163579868 32-33 25.320024190007956 28.77227169731114 27.999744436108394 17.907959676572506 34-35 19.667760615073966 29.501308816068644 29.836847125981613 20.994083442875777 36-37 22.57989218240177 30.00555724947464 29.188274678046426 18.22627589007716 38-39 20.21475590485432 31.412550337863053 27.944820339849368 20.427873417433254 40-41 20.965759499195986 27.29147188354384 28.21278287570106 23.529985741559116 42-43 21.69025782854193 26.558749963626425 28.28385367575521 23.467138532076433 44-45 19.658856996820635 31.716380380284132 27.713610928013217 20.911151694882015 46-47 21.363670580674057 30.770019066078447 27.275736359277285 20.59057399397021 48-49 21.603309172845957 27.188582113817024 30.92441697905768 20.28369173427934 50-51 19.264346053751918 31.659511088563008 28.250769538302322 20.825373319382752 52-53 22.07021934213806 26.506925528428955 29.84688939523715 21.57596573419584 54-55 21.91751359106488 27.601153326948452 30.49645816279926 19.98487491918741 56-57 22.80020533673073 25.81391406221336 29.24391043118183 22.141970169874078 58-59 23.29874470052846 27.942653740025737 28.148022099950786 20.61057945949502 60-61 24.038108751292054 29.368671788909285 26.742215106356333 19.85100435344233 62-63 22.947961118863777 26.315394941100113 31.07018012193687 19.666463818099235 64-65 19.988955085278633 30.465556439767262 29.853041273568493 19.692447201385612 66-67 18.795095324066402 29.304780816007913 26.644670670500968 25.255453189424713 68-69 18.54803968578293 32.224266171058275 25.453878941155782 23.773815202003014 70-71 19.203301708356054 30.568398765702316 28.48544234693684 21.742857179004794 72-73 22.60208006234747 30.033691417987395 26.999502789062372 20.364725730602764 74-75 21.495184771428463 31.877341351123277 24.868991876357683 21.758482001090574 76-77 25.11541493075104 28.55595963608714 26.14356934194828 20.185056091213536 78-79 19.15203078406243 29.91027430102643 29.5516308645271 21.38606405038404 80-81 17.2030556332228 28.936379773003594 30.07208926011723 23.788475333656372 82-83 18.92313030342519 27.953882104075234 31.409150199453702 21.71383739304588 84-85 17.422593872286374 27.642366167389287 29.448614578022266 25.486425382302073 86 18.795079509469147 27.387719522424465 31.071635064884127 22.745565903222257 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2604.0 1 2707.0 2 5890.5 3 5886.0 4 3256.5 5 4248.5 6 5243.5 7 5702.0 8 5917.5 9 6120.5 10 5855.0 11 5487.5 12 5588.0 13 5854.0 14 5905.0 15 5977.0 16 6536.5 17 7110.5 18 7656.5 19 8316.5 20 8852.0 21 9187.0 22 9597.0 23 11021.0 24 12578.5 25 15598.5 26 19771.5 27 25491.0 28 33361.5 29 37209.0 30 41175.0 31 48568.5 32 53248.0 33 58167.5 34 67122.0 35 77760.5 36 83112.0 37 86039.0 38 92201.0 39 100704.0 40 117692.0 41 142882.0 42 166667.5 43 176983.0 44 175296.5 45 178038.0 46 190355.0 47 201583.5 48 195833.5 49 165730.5 50 144717.0 51 134051.5 52 112701.0 53 94053.5 54 82681.0 55 74290.0 56 64713.0 57 60117.0 58 55178.0 59 42561.0 60 29259.0 61 21467.0 62 17734.5 63 13672.0 64 11174.0 65 8672.0 66 5495.0 67 3678.0 68 2297.5 69 1638.0 70 1080.0 71 943.0 72 731.5 73 477.5 74 368.0 75 199.0 76 90.0 77 70.0 78 77.0 79 97.0 80 56.0 81 14.0 82 12.5 83 9.5 84 6.0 85 4.0 86 3.0 87 4.5 88 3.0 89 0.5 90 0.5 91 0.0 92 0.5 93 1.0 94 1.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3161636.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.105305973515406 #Duplication Level Percentage of deduplicated Percentage of total 1 79.04915394430509 11.940616572762508 2 9.568185472395307 2.890607383437523 3 3.0066385869236036 1.3624858742177712 4 1.39421888576015 0.8424041145384316 5 0.782959977468846 0.5913425012341824 6 0.5183096821812987 0.4697535803030426 7 0.38823746401353937 0.4105111979014332 8 0.30607454291607067 0.3698679697160896 9 0.22537777129641476 0.3063960175555191 >10 2.1549860020941245 7.242555276621972 >50 0.7623990470936507 8.534411079227556 >100 1.8079912569547065 60.888105639098065 >500 0.031878406882048876 2.9122866160377985 >1k 0.003377844437832994 0.7875776636621864 >5k 0.0 0.0 >10k+ 2.1111527736456212E-4 0.45107851368593865 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14145 0.44739495628212733 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3201 0.1012450516125196 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 9.488758351688809E-5 0.0 0.0 0.0507332279870295 0.0 2 9.488758351688809E-5 0.0 0.0 0.1634913063995982 0.0 3 9.488758351688809E-5 0.0 0.0 0.2341825561196798 0.0 4 9.488758351688809E-5 0.0 0.0 0.34611827547510216 0.0 5 9.488758351688809E-5 0.0 0.0 0.5642332007859222 0.0 6 9.488758351688809E-5 0.0 0.0 0.7495802805889104 0.0 7 9.488758351688809E-5 0.0 0.0 0.8704354327949201 0.0 8 9.488758351688809E-5 0.0 0.0 1.1030048999948128 0.0 9 9.488758351688809E-5 0.0 0.0 1.1800852470050316 0.0 10 9.488758351688809E-5 0.0 0.0 1.3402871171760442 0.0 11 9.488758351688809E-5 0.0 0.0 1.6252977888662705 0.0 12 9.488758351688809E-5 0.0 0.0 1.8292744642330743 0.0 13 9.488758351688809E-5 0.0 0.0 1.904393801183944 0.0 14 9.488758351688809E-5 0.0 0.0 1.935896478911551 0.0 15 9.488758351688809E-5 0.0 0.0 1.988274425012873 0.0 16 9.488758351688809E-5 0.0 0.0 2.1114701376122995 0.0 17 9.488758351688809E-5 0.0 0.0 2.2573756118667676 0.0 18 9.488758351688809E-5 0.0 0.0 2.435542864516978 0.0 19 9.488758351688809E-5 0.0 0.0 2.5458022365636017 0.0 20 9.488758351688809E-5 0.0 0.0 2.669693791442152 0.0 21 9.488758351688809E-5 0.0 0.0 2.8176235341449805 0.0 22 9.488758351688809E-5 0.0 0.0 2.984151243217119 0.0 23 9.488758351688809E-5 0.0 0.0 3.155707994215653 0.0 24 9.488758351688809E-5 0.0 0.0 3.2869691514140147 0.0 25 9.488758351688809E-5 0.0 0.0 3.406306102283754 0.0 26 9.488758351688809E-5 0.0 0.0 3.525390019597449 0.0 27 9.488758351688809E-5 0.0 0.0 3.6425129268517944 0.0 28 9.488758351688809E-5 0.0 0.0 3.770041839098492 0.0 29 9.488758351688809E-5 0.0 0.0 3.9123415851793184 0.0 30 9.488758351688809E-5 0.0 0.0 4.073871881519568 0.0 31 9.488758351688809E-5 0.0 0.0 4.232207629214749 0.0 32 9.488758351688809E-5 0.0 0.0 4.372577994430731 0.0 33 9.488758351688809E-5 0.0 0.0 4.513517685147816 0.0 34 9.488758351688809E-5 0.0 0.0 4.667456974806714 0.0 35 1.2651677802251744E-4 0.0 0.0 4.838982096610742 0.0 36 1.2651677802251744E-4 0.0 0.0 5.000575651340003 0.0 37 1.2651677802251744E-4 0.0 0.0 5.163466003043994 0.0 38 1.2651677802251744E-4 0.0 0.0 5.344732916755755 0.0 39 1.2651677802251744E-4 0.0 0.0 5.571261207805073 0.0 40 1.2651677802251744E-4 0.0 0.0 5.771315863053179 0.0 41 1.2651677802251744E-4 0.0 0.0 5.984528263215626 0.0 42 1.2651677802251744E-4 0.0 0.0 6.183254492294496 0.0 43 1.2651677802251744E-4 0.0 0.0 6.361042194610638 0.0 44 1.2651677802251744E-4 0.0 0.0 6.547021858303739 0.0 45 1.2651677802251744E-4 0.0 0.0 6.7324954548847495 0.0 46 1.2651677802251744E-4 0.0 0.0 6.94763723591204 0.0 47 1.2651677802251744E-4 0.0 0.0 7.165056318943737 0.0 48 1.2651677802251744E-4 0.0 0.0 7.382317256002905 0.0 49 1.2651677802251744E-4 0.0 0.0 7.615076498369831 0.0 50 1.5814597252814682E-4 0.0 0.0 7.842648552837835 0.0 51 1.5814597252814682E-4 0.0 0.0 8.07230813414321 0.0 52 1.8977516703377618E-4 0.0 0.0 8.328852530778368 0.0 53 1.8977516703377618E-4 0.0 0.0 8.568506937547523 0.0 54 2.2140436153940556E-4 0.0 0.0 8.818219428169467 0.0 55 2.2140436153940556E-4 0.0 0.0 9.057842205744114 0.0 56 2.2140436153940556E-4 0.0 0.0 9.313848906072678 0.0 57 2.2140436153940556E-4 0.0 0.0 9.557836512489104 0.0 58 2.2140436153940556E-4 0.0 0.0 9.80071709709783 0.0 59 2.2140436153940556E-4 0.0 0.0 10.052105935028575 0.0 60 2.2140436153940556E-4 0.0 0.0 10.311908138697813 0.0 61 2.2140436153940556E-4 0.0 0.0 10.581199100718742 0.0 62 2.2140436153940556E-4 0.0 0.0 10.878608416655174 0.0 63 2.2140436153940556E-4 0.0 0.0 11.190155982535623 0.0 64 2.2140436153940556E-4 0.0 0.0 11.483769795131382 0.0 65 2.530335560450349E-4 0.0 0.0 11.757931653106176 0.0 66 2.530335560450349E-4 0.0 0.0 12.022383348367743 0.0 67 2.530335560450349E-4 0.0 0.0 12.28329257384468 0.0 68 2.846627505506643E-4 0.0 0.0 12.590506940077859 0.0 69 3.1629194505629365E-4 0.0 0.0 12.935233530994713 0.0 70 3.1629194505629365E-4 0.0 0.0 13.223407122135502 0.0 71 3.1629194505629365E-4 0.0 0.0 13.513510094141134 0.0 72 3.1629194505629365E-4 0.0 0.0 13.801873460448958 0.0 73 3.47921139561923E-4 0.0 0.0 14.108803163931585 0.0 74 3.7955033406755236E-4 0.0 0.0 14.430914880776914 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 9205 0.0 72.17817 1 TAGGGCG 675 0.0 68.74074 5 CGTAAGG 470 0.0 67.23405 2 AGGGCGA 1710 0.0 66.90058 6 GGGCGAT 2585 0.0 66.84719 7 CGTTAGG 475 0.0 66.52631 2 CGGGTCC 355 0.0 66.478874 6 TAGGTCG 145 0.0 66.2069 1 TACGGGT 485 0.0 65.979385 4 GGCGATC 465 0.0 65.37634 8 GCGAACG 75 0.0 64.0 1 TTACGTA 25 1.2358601E-4 64.0 80 TAATGCG 120 0.0 63.333332 1 GCGGGTC 520 0.0 63.07692 5 GTTACGG 395 0.0 62.784813 2 ACGGGAT 1525 0.0 62.688526 5 TGTTACG 205 0.0 62.439026 1 TCGATAG 315 0.0 62.22222 1 TTACGGG 1165 0.0 61.80257 3 CGAAGGG 1620 0.0 61.48148 3 >>END_MODULE