##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547781_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2334375 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.865871593038822 31.0 31.0 33.0 31.0 34.0 2 32.314653815261046 33.0 31.0 34.0 31.0 34.0 3 32.4499846854083 34.0 31.0 34.0 31.0 34.0 4 36.04468562248996 37.0 35.0 37.0 35.0 37.0 5 36.007723694779116 37.0 35.0 37.0 35.0 37.0 6 36.06459502008032 37.0 35.0 37.0 35.0 37.0 7 36.29321852744311 37.0 36.0 37.0 35.0 37.0 8 36.24961970548862 37.0 37.0 37.0 35.0 37.0 9 38.119683855421684 39.0 39.0 39.0 37.0 39.0 10-11 37.622012101740296 39.0 37.5 39.0 35.0 39.0 12-13 36.798380294511375 39.0 35.0 39.0 33.0 39.0 14-15 37.82168139223561 40.0 35.0 41.0 33.0 41.0 16-17 38.01550200803213 40.0 35.0 41.0 34.0 41.0 18-19 37.90720985274431 40.0 36.0 41.0 34.0 41.0 20-21 37.73390564926372 40.0 35.0 41.0 33.5 41.0 22-23 37.55122463186078 39.0 35.0 41.0 33.0 41.0 24-25 37.48845815261045 39.0 35.0 41.0 33.0 41.0 26-27 37.47271196787149 39.0 35.0 41.0 33.0 41.0 28-29 37.48519646586345 39.0 35.0 41.0 33.0 41.0 30-31 37.32219095046854 39.0 35.0 41.0 33.0 41.0 32-33 37.02547662650602 39.0 35.0 41.0 32.5 41.0 34-35 36.7358944042838 39.0 35.0 41.0 31.5 41.0 36-37 36.56321349397591 39.0 35.0 41.0 31.0 41.0 38-39 36.47156862115127 39.0 35.0 41.0 31.0 41.0 40-41 36.30080878179384 38.5 35.0 41.0 31.0 41.0 42-43 36.26482248995984 38.5 35.0 41.0 31.0 41.0 44-45 36.17185970548862 38.0 35.0 41.0 30.5 41.0 46-47 36.07602955823293 38.0 35.0 41.0 30.0 41.0 48-49 35.98759796519411 38.0 35.0 40.0 30.0 41.0 50-51 35.81817103078983 38.0 35.0 40.0 30.0 41.0 52-53 35.62131234270415 37.0 35.0 40.0 29.5 41.0 54-55 35.42512621151272 37.0 35.0 40.0 29.0 41.0 56-57 35.14004305220884 36.5 34.5 40.0 28.5 41.0 58-59 34.840909236947795 36.0 34.0 40.0 28.0 41.0 60-61 34.53425949129853 35.5 34.0 39.0 27.0 41.0 62-63 34.138627469879516 35.0 33.5 39.0 26.0 40.5 64-65 33.851012797858104 35.0 33.5 38.5 26.0 40.0 66-67 33.59018859437751 35.0 33.0 38.0 26.0 40.0 68-69 33.15755480589023 35.0 33.0 37.0 24.5 40.0 70-71 32.903627309236946 35.0 33.0 37.0 24.0 39.0 72-73 32.6766843373494 35.0 33.0 36.0 24.0 39.0 74-75 32.38752856760375 35.0 33.0 36.0 23.5 38.5 76-77 30.342515876840697 33.0 29.5 34.5 19.5 36.0 78-79 31.423960374832664 34.0 31.5 35.0 20.0 37.0 80-81 31.674605408299865 35.0 32.0 35.0 20.0 36.5 82-83 31.52636722891566 35.0 32.0 35.0 20.0 36.0 84-85 31.338342811244978 35.0 32.0 35.0 19.5 36.0 86 30.93524390896921 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 3.0 9 5.0 10 18.0 11 12.0 12 46.0 13 88.0 14 288.0 15 807.0 16 2067.0 17 4546.0 18 9524.0 19 14912.0 20 18101.0 21 18616.0 22 16979.0 23 15592.0 24 15489.0 25 17029.0 26 20168.0 27 25175.0 28 31289.0 29 39543.0 30 49995.0 31 63130.0 32 80008.0 33 109466.0 34 276064.0 35 242785.0 36 203031.0 37 350842.0 38 472708.0 39 235214.0 40 835.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.69804551539492 24.263668005354752 29.237633199464526 13.80065327978581 2 30.605708165997324 25.860112449799193 30.939973226238287 12.594206157965193 3 28.711282463186077 25.221054886211512 33.32305220883534 12.744610441767069 4 26.60613654618474 27.276380187416333 32.207250334672025 13.910232931726906 5 24.040653279785808 31.295357429718873 31.192160642570283 13.471828647925033 6 22.774661311914322 39.94593842034806 26.641906291834 10.637493975903615 7 88.26431057563588 3.5093761713520752 6.585831325301204 1.6404819277108436 8 88.83362784471218 3.1543775100401605 6.276883534136546 1.7351111111111113 9 84.51311378848729 5.424835341365462 7.580230254350736 2.4818206157965195 10-11 41.19121820615796 28.16340562248996 19.43256760374833 11.212808567603748 12-13 30.163791164658633 25.52869611780455 27.918543507362788 16.38896921017403 14-15 16.96314859437751 31.93872021419009 34.733258366800534 16.36487282463186 16-17 22.40027844712182 26.081092369477908 32.237686746987954 19.280942436412314 18-19 24.398372155287817 27.86533868808568 30.20671485943775 17.529574297188756 20-21 26.526757697456492 28.570923694779115 28.872803212851405 16.029515394912984 22-23 21.529274431057562 24.69410441767068 32.67283534136546 21.10378580990629 24-25 20.222607764390897 27.635855421686745 34.12170281124498 18.019834002677378 26-27 17.8334672021419 33.5337295850067 30.239357429718876 18.39344578313253 28-29 17.001103078982595 28.88182061579652 35.54891566265061 18.56816064257028 30-31 22.65368674698795 28.581847389558234 30.478350736278447 18.286115127175368 32-33 26.125601070950466 28.309997322623833 28.602580990629185 16.96182061579652 34-35 20.136203480589025 28.684530120481927 31.12319143239625 20.056074966532798 36-37 22.845408299866133 30.34467469879518 29.870029451137885 16.9398875502008 38-39 20.3514859437751 31.789472556894243 27.862704149933066 19.996337349397592 40-41 20.944171352074967 27.373108433734938 29.03687282463186 22.64584738955823 42-43 20.566468540829987 27.532615796519412 28.758211512717537 23.142704149933067 44-45 19.85441499330656 31.323223560910307 28.40130655957162 20.42105488621151 46-47 21.57772423025435 30.259448460508704 28.154302543507363 20.008524765729586 48-49 21.020444444444443 28.114720214190093 31.04659705488621 19.81823828647925 50-51 19.651726907630522 31.1735046854083 29.112589022757696 20.06217938420348 52-53 22.26960107095047 27.261729585006695 30.150875502008034 20.317793842034806 54-55 22.49280856760375 27.28109236947791 30.852283801874165 19.37381526104418 56-57 22.195555555555554 26.486318607764392 29.140690763052206 22.177435073627844 58-59 24.03645515394913 28.557665327978583 27.868080321285138 19.537799196787148 60-61 24.621493975903615 29.14338955823293 26.9560374832664 19.279078982597056 62-63 22.965354752342705 26.7800374832664 30.585659973226235 19.66894779116466 64-65 20.44515127175368 30.2589344042838 30.549161981258365 18.746752342704152 66-67 20.051791164658635 29.366961178045514 26.545670682730925 24.035576974564925 68-69 18.826409638554217 32.01816331994645 26.411330655957162 22.744096385542168 70-71 19.316562248995982 30.671078982597056 29.326457831325303 20.685900937081662 72-73 22.403062918340026 30.744953145917002 27.42498527443106 19.426998661311913 74-75 21.004123159303884 32.22956894243641 25.285868808567603 21.4804390896921 76-77 25.373386880856764 28.46504953145917 26.638500669344044 19.523062918340024 78-79 19.690024096385542 29.74318607764391 29.559282463186076 21.007507362784473 80-81 17.935228915662652 29.13942704149933 30.004605087014724 22.920738955823296 82-83 19.420251673360106 28.50799464524766 30.782586345381524 21.28916733601071 84-85 18.091116465863454 27.655175368139222 29.733954484605086 24.51975368139224 86 19.333954484605087 27.738216867469877 30.53399732262383 22.393831325301207 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1957.0 1 2371.5 2 6526.5 3 6679.5 4 3520.0 5 4471.0 6 5499.5 7 6005.0 8 6333.0 9 6571.5 10 6233.5 11 5870.5 12 5705.0 13 5691.5 14 5729.0 15 5735.5 16 5680.0 17 5671.5 18 5997.5 19 7384.5 20 8021.0 21 7543.0 22 7619.5 23 9061.5 24 12254.5 25 14141.5 26 14888.0 27 17429.0 28 25076.0 29 30869.0 30 32923.0 31 38744.0 32 44793.0 33 50717.0 34 53631.5 35 58850.0 36 64796.0 37 64171.0 38 67581.5 39 74762.0 40 85151.0 41 98547.0 42 108962.0 43 113225.0 44 118005.5 45 123214.5 46 130833.0 47 133719.5 48 129143.5 49 118114.5 50 107358.0 51 94961.5 52 78200.0 53 70185.5 54 64672.0 55 60961.0 56 55212.5 57 51311.0 58 45331.5 59 33787.5 60 25425.5 61 21104.0 62 16569.5 63 11203.0 64 8847.0 65 6693.5 66 3854.5 67 2722.5 68 2089.5 69 1562.0 70 955.5 71 690.0 72 583.5 73 394.0 74 249.0 75 122.5 76 73.5 77 71.0 78 37.0 79 21.0 80 20.0 81 15.5 82 10.0 83 10.5 84 8.0 85 3.5 86 4.0 87 3.0 88 4.0 89 3.5 90 0.5 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2334375.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.543597645388713 #Duplication Level Percentage of deduplicated Percentage of total 1 79.41254726929216 12.343566827492893 2 8.662094623206043 2.6928022717879934 3 2.6615206575309585 1.2410881867665486 4 1.2392127388702872 0.7704729684015957 5 0.8092938253860258 0.6289668799348928 6 0.5411690594399738 0.5047028470841041 7 0.4205430820094089 0.45757267215141717 8 0.3351452939884766 0.41674908820019146 9 0.2658901257854518 0.3719600219781771 >10 2.6112108154634313 9.309567444987188 >50 1.1103261280168142 12.613618638570731 >100 1.9168720336549046 56.20328984320684 >500 0.011117135181251498 1.0828529309750468 >1k 0.0027792837953128746 0.6919355060810389 >5k 0.0 0.0 >10k+ 2.7792837953128746E-4 0.6708538723813731 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15529 0.665231593038822 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2805 0.12016064257028111 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2412 0.10332530120481928 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.28380187416332E-5 0.0 0.0 0.04755020080321285 0.0 2 4.28380187416332E-5 0.0 0.0 0.131855421686747 0.0 3 4.28380187416332E-5 0.0 0.0 0.1922570281124498 0.0 4 4.28380187416332E-5 0.0 0.0 0.3028219544846051 0.0 5 4.28380187416332E-5 0.0 0.0 0.5438714859437751 0.0 6 4.28380187416332E-5 0.0 0.0 0.7276037483266399 0.0 7 4.28380187416332E-5 0.0 0.0 0.8532476572958501 0.0 8 4.28380187416332E-5 0.0 0.0 1.111475234270415 0.0 9 4.28380187416332E-5 0.0 0.0 1.2010923694779116 0.0 10 4.28380187416332E-5 0.0 0.0 1.4161820615796519 0.0 11 4.28380187416332E-5 0.0 0.0 1.7143775100401606 0.0 12 4.28380187416332E-5 0.0 0.0 1.953156626506024 0.0 13 4.28380187416332E-5 0.0 0.0 2.029408299866131 0.0 14 4.28380187416332E-5 0.0 0.0 2.0688621151271755 0.0 15 4.28380187416332E-5 0.0 0.0 2.125065595716198 0.0 16 4.28380187416332E-5 0.0 0.0 2.228562248995984 0.0 17 4.28380187416332E-5 0.0 0.0 2.3638447121820616 0.0 18 4.28380187416332E-5 0.0 0.0 2.523202141900937 0.0 19 4.28380187416332E-5 0.0 0.0 2.6403212851405624 0.0 20 4.28380187416332E-5 0.0 0.0 2.760995983935743 0.0 21 4.28380187416332E-5 0.0 0.0 2.8982918340026775 0.0 22 4.28380187416332E-5 0.0 0.0 3.0563212851405623 0.0 23 4.28380187416332E-5 0.0 0.0 3.213965194109772 0.0 24 4.28380187416332E-5 0.0 0.0 3.3325836680053547 0.0 25 4.28380187416332E-5 0.0 0.0 3.441263721552878 0.0 26 4.28380187416332E-5 0.0 0.0 3.548144578313253 0.0 27 4.28380187416332E-5 0.0 0.0 3.6871967871485944 0.0 28 4.28380187416332E-5 0.0 0.0 3.8112128514056223 0.0 29 4.28380187416332E-5 0.0 0.0 3.965215528781794 0.0 30 4.28380187416332E-5 0.0 0.0 4.11489156626506 0.0 31 4.28380187416332E-5 0.0 0.0 4.253858099062918 0.0 32 4.28380187416332E-5 0.0 0.0 4.38584203480589 0.0 33 4.28380187416332E-5 0.0 0.0 4.518382864792503 0.0 34 4.28380187416332E-5 0.0 0.0 4.671228915662651 0.0 35 4.28380187416332E-5 0.0 0.0 4.838082998661312 0.0 36 4.28380187416332E-5 0.0 0.0 4.987930388219545 0.0 37 4.28380187416332E-5 0.0 0.0 5.152085676037483 0.0 38 4.28380187416332E-5 0.0 0.0 5.325751004016064 0.0 39 4.28380187416332E-5 0.0 0.0 5.611480589022758 0.0 40 4.28380187416332E-5 0.0 0.0 5.794955823293173 0.0 41 8.56760374832664E-5 0.0 0.0 5.99004016064257 0.0 42 8.56760374832664E-5 0.0 0.0 6.190393574297189 0.0 43 8.56760374832664E-5 0.0 0.0 6.36170281124498 0.0 44 8.56760374832664E-5 0.0 0.0 6.524273092369478 0.0 45 8.56760374832664E-5 0.0 0.0 6.690270414993306 0.0 46 8.56760374832664E-5 0.0 0.0 6.878800535475234 0.0 47 8.56760374832664E-5 0.0 0.0 7.077697456492637 0.0 48 8.56760374832664E-5 0.0 0.0 7.262672021419009 0.0 49 8.56760374832664E-5 0.0 0.0 7.4580133868808565 0.0 50 1.285140562248996E-4 0.0 0.0 7.662821954484605 0.0 51 1.285140562248996E-4 0.0 0.0 7.87041499330656 0.0 52 1.285140562248996E-4 0.0 0.0 8.11566265060241 0.0 53 1.285140562248996E-4 0.0 0.0 8.330966532797857 0.0 54 1.285140562248996E-4 0.0 0.0 8.540915662650603 0.0 55 1.285140562248996E-4 0.0 0.0 8.760032128514057 0.0 56 1.285140562248996E-4 0.0 0.0 8.98334672021419 0.0 57 1.285140562248996E-4 0.0 0.0 9.210688085676038 0.0 58 1.285140562248996E-4 0.0 0.0 9.425734939759035 0.0 59 1.285140562248996E-4 0.0 0.0 9.649435073627846 0.0 60 1.285140562248996E-4 0.0 0.0 9.899180722891566 0.0 61 1.713520749665328E-4 0.0 0.0 10.164862115127175 0.0 62 1.713520749665328E-4 0.0 0.0 10.488289156626506 0.0 63 1.713520749665328E-4 0.0 0.0 10.770420348058902 0.0 64 1.713520749665328E-4 0.0 0.0 11.041713520749665 0.0 65 1.713520749665328E-4 0.0 0.0 11.2860187416332 0.0 66 2.14190093708166E-4 0.0 0.0 11.516487282463187 0.0 67 2.14190093708166E-4 0.0 0.0 11.761991967871486 0.0 68 2.14190093708166E-4 0.0 0.0 12.069868808567604 0.0 69 2.14190093708166E-4 0.0 0.0 12.493322623828648 0.0 70 2.14190093708166E-4 0.0 0.0 12.77742436412316 0.0 71 2.570281124497992E-4 0.0 0.0 13.045633199464525 0.0 72 2.570281124497992E-4 0.0 0.0 13.31071485943775 0.0 73 2.9986613119143237E-4 0.0 0.0 13.594987951807228 0.0 74 2.9986613119143237E-4 0.0 0.0 13.907319946452477 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GATCGCG 75 0.0 74.666664 1 TACGGGA 1015 0.0 71.72414 4 CGTAAGG 205 0.0 70.243904 2 CGTTTTT 7635 0.0 68.788475 1 GCGCGAC 130 0.0 67.69231 9 TGTAGCG 370 0.0 65.945946 1 TAGGGAC 3130 0.0 65.43131 5 TAGCGGG 2060 0.0 64.46603 3 TATAGCG 255 0.0 64.31372 1 CGATAGG 400 0.0 64.0 2 CGTAGGG 1115 0.0 63.497753 3 TTACGGG 1095 0.0 62.465755 3 ATTAGCG 205 0.0 62.439026 1 TAGGGAT 4185 0.0 62.222225 5 TACCGCG 45 9.429641E-9 62.222225 1 GTAGGGA 3710 0.0 61.886787 4 GTACGGG 830 0.0 61.686745 3 ACGTAGG 435 0.0 61.609196 2 TAGGGAG 2755 0.0 61.41561 5 CTAGGGA 1700 0.0 61.411766 4 >>END_MODULE