##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547780_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 919963 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.78224776431226 31.0 31.0 33.0 30.0 34.0 2 32.21818920978344 33.0 31.0 34.0 30.0 34.0 3 32.337672275950226 34.0 31.0 34.0 30.0 34.0 4 35.92140553478781 37.0 35.0 37.0 35.0 37.0 5 35.85698663968007 37.0 35.0 37.0 35.0 37.0 6 35.91249865483721 37.0 35.0 37.0 35.0 37.0 7 36.23110712061246 37.0 35.0 37.0 35.0 37.0 8 36.20266358538333 37.0 36.0 37.0 35.0 37.0 9 38.10155951924153 39.0 39.0 39.0 37.0 39.0 10-11 37.4973748944251 39.0 37.5 39.0 35.0 39.0 12-13 36.07366491913261 37.0 35.0 39.0 32.5 39.0 14-15 36.965083378353256 38.0 35.0 41.0 32.5 41.0 16-17 37.268812984870046 38.0 35.0 41.0 33.0 41.0 18-19 37.192954499257034 38.0 35.0 41.0 33.0 41.0 20-21 36.920342448555 38.0 35.0 41.0 33.0 41.0 22-23 36.70983887395471 37.5 35.0 41.0 32.5 41.0 24-25 36.621144002530535 37.0 35.0 41.0 32.5 41.0 26-27 36.54998679294711 37.0 35.0 41.0 32.5 41.0 28-29 36.62199294971646 37.0 35.0 41.0 33.0 41.0 30-31 36.4543612080051 36.0 35.0 40.0 32.5 41.0 32-33 36.05739904757039 36.0 35.0 40.0 31.0 41.0 34-35 35.78640010522162 36.0 35.0 40.0 30.5 41.0 36-37 35.52218023985748 36.0 35.0 40.0 30.0 41.0 38-39 35.50607959233143 36.0 35.0 40.0 30.0 41.0 40-41 35.36479673639049 36.0 35.0 40.0 29.5 41.0 42-43 35.28015854985472 35.5 35.0 40.0 29.5 41.0 44-45 35.113831751929155 35.0 34.5 40.0 29.0 41.0 46-47 34.99105290104059 35.0 34.0 40.0 28.5 41.0 48-49 34.94886968280246 35.5 34.5 40.0 28.0 41.0 50-51 34.75420370167061 35.0 34.0 40.0 28.0 41.0 52-53 34.56655974207658 35.0 34.0 40.0 27.5 41.0 54-55 34.383583361504755 35.0 34.0 39.0 27.0 41.0 56-57 34.05958337454876 35.0 34.0 39.0 26.0 41.0 58-59 33.707860533521455 35.0 34.0 38.5 25.0 40.0 60-61 33.36993661701612 35.0 33.0 37.5 25.0 40.0 62-63 32.84661122240786 35.0 32.0 37.0 23.0 40.0 64-65 32.55553864666297 35.0 32.0 36.5 22.0 40.0 66-67 32.32972032570875 35.0 32.0 36.0 21.0 39.0 68-69 32.04576271002203 35.0 32.0 35.5 19.5 39.0 70-71 31.76105452067094 35.0 32.0 35.0 19.0 38.5 72-73 31.518805104118318 35.0 32.0 35.0 18.0 37.5 74-75 31.25592822754828 35.0 31.5 35.0 17.5 37.0 76-77 29.165859387823204 32.5 28.0 34.5 11.5 35.0 78-79 30.101505169229632 34.0 29.5 35.0 14.0 36.0 80-81 30.616331852476677 34.0 31.0 35.0 15.0 36.0 82-83 30.514045673576 34.5 31.0 35.0 11.5 36.0 84-85 30.427422624605555 34.0 31.0 35.0 10.5 35.0 86 30.083426181270333 34.0 30.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 3.0 10 3.0 11 4.0 12 14.0 13 57.0 14 152.0 15 510.0 16 1215.0 17 2675.0 18 5139.0 19 7467.0 20 8550.0 21 8776.0 22 7968.0 23 7411.0 24 7991.0 25 9471.0 26 11189.0 27 13624.0 28 16761.0 29 20551.0 30 25160.0 31 30941.0 32 38085.0 33 51301.0 34 150280.0 35 128621.0 36 66340.0 37 109653.0 38 132751.0 39 57142.0 40 158.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 29.45477155059497 24.87523954767746 31.240386841644717 14.429602060082852 2 28.7238725905281 25.98224059011069 32.370758389196084 12.923128430165127 3 27.666221358902476 26.448454992211644 33.6105908607194 12.27473278816648 4 24.936002860984626 28.131457460789182 32.174228746156096 14.758310932070092 5 23.295393401691157 31.695187741246116 31.437459984803734 13.571958872258993 6 21.34085827364796 41.06480369319201 26.553567915231373 11.040770117928655 7 88.10973919603289 4.100925798102749 6.3072101812790295 1.4821248245853367 8 89.3577241693416 3.29448032149119 5.536744412547026 1.8110510966201903 9 86.0896579536351 5.00715789656758 6.823317894306618 2.07986625549071 10-11 50.87525259168032 23.26680529543036 16.120430930374376 9.737511182514949 12-13 32.83007033978541 32.76061102457382 21.536137866414194 12.87318076922659 14-15 12.398813865340237 36.66832253036264 38.35322724935677 12.579636354940362 16-17 14.00686766750402 21.97044881152829 38.59524785235928 25.42743566860841 18-19 23.421594129329115 26.29241610803913 31.763451356195848 18.522538406435913 20-21 26.880754986885343 27.827966994324772 27.74377882588756 17.547499192902325 22-23 19.242621714134156 27.639155052974957 27.56235848615651 25.55586474673438 24-25 15.720958342889876 26.539654312184297 38.52160358623119 19.217783758694644 26-27 14.573792641660589 39.99731510941201 28.3592383606732 17.0696538882542 28-29 12.388976513185856 29.66407344643208 40.778107380405515 17.168842659976544 30-31 23.092993957365675 31.96579645050942 28.983448247375165 15.957761344749736 32-33 28.63077102013885 30.42144086229555 25.649238067183138 15.298550050382461 34-35 18.00251749255133 31.1109251132926 28.924750234520303 21.961807159635768 36-37 23.778619357517638 29.55858007332904 31.12886061722048 15.53393995193285 38-39 17.098187644503092 33.32541634826618 28.369673562958507 21.206722444272216 40-41 19.225012310277695 26.910103993312774 28.503048492167622 25.361835204241913 42-43 21.51537616186738 25.160740160202096 27.771008181850792 25.552875496079736 44-45 17.342980098112644 37.16605993936712 25.603855807244425 19.887104155275807 46-47 21.803757325022854 32.621909794198245 26.264262801873556 19.310070078905348 48-49 21.462602300309904 24.88306594939144 32.9489338158165 20.705397934482146 50-51 17.765551440655766 35.33919298928326 26.982661259202818 19.912594310858154 52-53 24.020042110389223 25.712718881085433 29.69342245285952 20.573816555665825 54-55 22.896464314325684 28.59158466155704 30.323012990739844 18.18893803337743 56-57 24.410818695969294 22.533569284851673 29.79674182548646 23.258870193692573 58-59 25.359280753682484 27.29925007853577 26.99521611195233 20.34625305582942 60-61 25.90810717387547 30.43823501597347 25.768971143404677 17.88468666674638 62-63 24.691427807422688 26.072026809773874 31.525561354097935 17.7109840287055 64-65 16.875026495630802 33.78663054927209 31.38827322403184 17.95006973106527 66-67 15.67264118230842 30.892927215551058 23.302893703333723 30.131537898806798 68-69 15.968142197023141 36.2496643886765 22.003874068848422 25.77831934545194 70-71 18.013224444896153 31.699861842269744 28.322823852698427 21.96408986013568 72-73 23.91612488763135 31.985688554865792 24.920132657509054 19.178053899993806 74-75 23.12750621492386 35.54066848340639 20.91975438142621 20.41207092024353 76-77 31.727254248268682 28.647510823804872 22.699717271238082 16.925517656688367 78-79 17.430592317299716 31.7973657636231 30.92678727296641 19.845254646110767 80-81 14.076381332727511 29.574069826721296 32.912791057901245 23.436757782649956 82-83 17.594892403281438 25.907944123839766 34.74487560912776 21.75228786375104 84-85 13.551468917771691 26.23779434607696 31.65263168192634 28.55810505422501 86 17.19482196566601 25.059812188098867 35.18054530453942 22.5648205416957 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2280.0 1 1884.0 2 2708.5 3 2421.0 4 1159.0 5 1855.5 6 3070.0 7 3834.0 8 3944.5 9 3889.0 10 3443.5 11 2970.0 12 2711.0 13 2604.0 14 2562.0 15 2601.5 16 2748.0 17 2893.5 18 3009.5 19 3115.0 20 3166.0 21 3189.0 22 3232.0 23 3382.0 24 3497.0 25 3832.5 26 4642.0 27 6316.0 28 7693.0 29 7878.0 30 8875.5 31 11911.0 32 12641.0 33 12906.0 34 16827.0 35 18419.5 36 17664.0 37 20212.0 38 23193.0 39 26961.0 40 35513.0 41 43129.5 42 51436.5 43 57344.0 44 58391.5 45 62815.5 46 67696.5 47 71013.0 48 67950.5 49 51152.5 50 39229.0 51 33240.0 52 24126.0 53 19057.0 54 17012.5 55 16954.0 56 17848.0 57 18700.0 58 16134.0 59 10953.0 60 6759.0 61 4446.5 62 3361.5 63 2276.5 64 1543.0 65 1222.0 66 679.5 67 322.5 68 215.5 69 154.5 70 50.5 71 36.0 72 54.0 73 47.0 74 18.0 75 9.5 76 5.5 77 9.0 78 7.0 79 2.0 80 2.0 81 2.5 82 2.5 83 2.0 84 2.0 85 3.0 86 4.0 87 2.5 88 1.5 89 1.0 90 0.5 91 1.5 92 3.5 93 5.0 94 3.0 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 919963.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.261444350184167 #Duplication Level Percentage of deduplicated Percentage of total 1 79.52772766121477 13.727634453206608 2 9.047187893132131 3.123350606859204 3 2.83478367847979 1.467973821326678 4 1.3564526752792592 0.9365732947196547 5 0.8099695653890959 0.6990622289153368 6 0.5690697223111394 0.5893779205829094 7 0.44346589398699726 0.5358403295182858 8 0.31759820183709486 0.43857629493836575 9 0.26214759479480065 0.40725415071765725 >10 2.330832980483492 8.610082433335032 >50 0.8297817062616816 10.448950135547303 >100 1.6582946331559902 56.4855439275724 >500 0.010150234938980813 1.1508956814567401 >1k 0.0019031690510589027 0.7744181026890643 >5k 6.343896836863008E-4 0.6044666186147675 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5520 0.6000241314052848 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3057 0.3322959727728181 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2189 0.2379443521098131 No Hit TAACAGGGGATGAGCACGGGATTTACAACTGTGACATCTCAAGATGGTCA 1826 0.1984862434684873 No Hit CTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGCCGTCTTCTGC 975 0.10598252321017258 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTGGTTCTTCGTATGC 969 0.10533032306734075 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0870002380530522E-4 0.0 0.0 0.11630902547167658 0.0 2 1.0870002380530522E-4 0.0 0.0 0.3483835762960032 0.0 3 1.0870002380530522E-4 0.0 0.0 0.45393129941095456 0.0 4 1.0870002380530522E-4 0.0 0.0 0.6658963458312998 0.0 5 1.0870002380530522E-4 0.0 0.0 1.046781229245089 0.0 6 1.0870002380530522E-4 0.0 0.0 1.3841861031367566 0.0 7 1.0870002380530522E-4 0.0 0.0 1.6031079510806412 0.0 8 1.0870002380530522E-4 0.0 0.0 2.1021497603707977 0.0 9 1.0870002380530522E-4 0.0 0.0 2.284657100339905 0.0 10 1.0870002380530522E-4 0.0 0.0 2.640106178183253 0.0 11 1.0870002380530522E-4 0.0 0.0 3.2952412216578275 0.0 12 1.0870002380530522E-4 0.0 0.0 3.7542814221876313 0.0 13 1.0870002380530522E-4 0.0 0.0 3.9066788555626695 0.0 14 1.0870002380530522E-4 0.0 0.0 3.9637463680604546 0.0 15 1.0870002380530522E-4 0.0 0.0 4.0588588888900965 0.0 16 1.0870002380530522E-4 0.0 0.0 4.262345333453628 0.0 17 1.0870002380530522E-4 0.0 0.0 4.502572386063353 0.0 18 1.0870002380530522E-4 0.0 0.0 4.8059541525039595 0.0 19 1.0870002380530522E-4 0.0 0.0 4.975091389545014 0.0 20 1.0870002380530522E-4 0.0 0.0 5.136184824824476 0.0 21 1.0870002380530522E-4 0.0 0.0 5.332714467864468 0.0 22 1.0870002380530522E-4 0.0 0.0 5.542722913856318 0.0 23 1.0870002380530522E-4 0.0 0.0 5.752948759895778 0.0 24 1.0870002380530522E-4 0.0 0.0 5.902085192556657 0.0 25 1.0870002380530522E-4 0.0 0.0 6.028829420313643 0.0 26 1.0870002380530522E-4 0.0 0.0 6.154269247784965 0.0 27 1.0870002380530522E-4 0.0 0.0 6.277861174851597 0.0 28 1.0870002380530522E-4 0.0 0.0 6.411670904155928 0.0 29 1.0870002380530522E-4 0.0 0.0 6.550589534579108 0.0 30 1.0870002380530522E-4 0.0 0.0 6.7524454787855595 0.0 31 1.0870002380530522E-4 0.0 0.0 6.913865014136438 0.0 32 1.0870002380530522E-4 0.0 0.0 7.062566646702096 0.0 33 1.0870002380530522E-4 0.0 0.0 7.195724175863594 0.0 34 1.0870002380530522E-4 0.0 0.0 7.3523609101670395 0.0 35 1.0870002380530522E-4 0.0 0.0 7.563673756444553 0.0 36 1.0870002380530522E-4 0.0 0.0 7.720853990867024 0.0 37 1.0870002380530522E-4 0.0 0.0 7.898687229812503 0.0 38 1.0870002380530522E-4 0.0 0.0 8.048693262663825 0.0 39 1.0870002380530522E-4 0.0 0.0 8.226417801585498 0.0 40 1.0870002380530522E-4 0.0 0.0 8.44588314964841 0.0 41 1.0870002380530522E-4 0.0 0.0 8.624694688808137 0.0 42 1.0870002380530522E-4 0.0 0.0 8.817528531038748 0.0 43 1.0870002380530522E-4 0.0 0.0 8.988296268436883 0.0 44 1.0870002380530522E-4 0.0 0.0 9.175803809501033 0.0 45 1.0870002380530522E-4 0.0 0.0 9.370050752041115 0.0 46 1.0870002380530522E-4 0.0 0.0 9.564297694581196 0.0 47 1.0870002380530522E-4 0.0 0.0 9.764088338335347 0.0 48 1.0870002380530522E-4 0.0 0.0 9.960509281351532 0.0 49 1.0870002380530522E-4 0.0 0.0 10.18627923079515 0.0 50 1.0870002380530522E-4 0.0 0.0 10.403787978429568 0.0 51 1.0870002380530522E-4 0.0 0.0 10.5970566207554 0.0 52 1.0870002380530522E-4 0.0 0.0 10.82282657019902 0.0 53 1.0870002380530522E-4 0.0 0.0 11.041422318071488 0.0 54 1.0870002380530522E-4 0.0 0.0 11.268605367824575 0.0 55 1.0870002380530522E-4 0.0 0.0 11.524376523838459 0.0 56 1.0870002380530522E-4 0.0 0.0 11.765038376543405 0.0 57 1.0870002380530522E-4 0.0 0.0 11.991786626201272 0.0 58 1.0870002380530522E-4 0.0 0.0 12.187772769122237 0.0 59 1.0870002380530522E-4 0.0 0.0 12.407999017351784 0.0 60 1.0870002380530522E-4 0.0 0.0 12.654856771413632 0.0 61 1.0870002380530522E-4 0.0 0.0 12.910193127332295 0.0 62 1.0870002380530522E-4 0.0 0.0 13.180856186607505 0.0 63 1.0870002380530522E-4 0.0 0.0 13.51576095995165 0.0 64 1.0870002380530522E-4 0.0 0.0 13.774575716632082 0.0 65 1.0870002380530522E-4 0.0 0.0 14.040238574812248 0.0 66 1.0870002380530522E-4 0.0 0.0 14.26753032458914 0.0 67 1.0870002380530522E-4 0.0 0.0 14.529932182055148 0.0 68 1.0870002380530522E-4 0.0 0.0 14.802117041663632 0.0 69 1.0870002380530522E-4 0.0 0.0 15.074519301319727 0.0 70 1.0870002380530522E-4 0.0 0.0 15.306376452096442 0.0 71 1.0870002380530522E-4 0.0 0.0 15.558451807300946 0.0 72 1.0870002380530522E-4 0.0 0.0 15.820310164647926 0.0 73 1.0870002380530522E-4 0.0 0.0 16.123909331136144 0.0 74 2.1740004761061044E-4 0.0 0.0 16.430225998219495 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCCGGAT 15 0.0013097073 80.00001 4 TAGCGCG 15 0.0013097073 80.00001 1 ATCGTAG 15 0.0013097073 80.00001 1 TCGTGAA 15 0.0013097073 80.00001 1 CGGGACG 30 4.0592568E-8 80.00001 6 GCGGACC 15 0.0013097073 80.00001 5 CCGAACG 30 4.0592568E-8 80.00001 1 CACGTTG 30 4.0592568E-8 80.00001 1 TATCGTG 15 0.0013097073 80.00001 1 CGATATC 30 4.0592568E-8 80.00001 9 ATACCGG 15 0.0013097073 80.00001 2 CTAGACG 20 4.0904655E-5 80.0 1 ACCGGGT 50 0.0 80.0 4 TTGTGCG 40 4.1836756E-11 80.0 1 ATTACCG 55 0.0 80.0 1 GCACGAG 20 4.0904655E-5 80.0 1 ACGGGTA 40 4.1836756E-11 80.0 5 GCCGCAC 35 1.2896635E-9 80.0 8 TAGGCGA 40 4.1836756E-11 80.0 1 TGGGCGA 165 0.0 77.57575 6 >>END_MODULE