##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547777_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 4003824 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80783221240494 31.0 31.0 33.0 30.0 34.0 2 32.25725581344235 33.0 31.0 34.0 31.0 34.0 3 32.411397703795174 34.0 31.0 34.0 31.0 34.0 4 36.01042803080255 37.0 35.0 37.0 35.0 37.0 5 35.978162127006584 37.0 35.0 37.0 35.0 37.0 6 36.03611647265215 37.0 35.0 37.0 35.0 37.0 7 36.262868697525164 37.0 35.0 37.0 35.0 37.0 8 36.21442975515407 37.0 36.0 37.0 35.0 37.0 9 38.095598607731006 39.0 39.0 39.0 37.0 39.0 10-11 37.58157239179344 39.0 37.5 39.0 35.0 39.0 12-13 37.10744178565292 39.0 37.0 39.0 33.5 39.0 14-15 38.27105824331939 40.0 37.0 41.0 33.0 41.0 16-17 38.35667888998118 40.0 37.0 41.0 34.0 41.0 18-19 38.21415851446018 40.0 37.0 41.0 34.0 41.0 20-21 38.05457182933116 40.0 35.5 41.0 34.0 41.0 22-23 37.87569958120037 40.0 35.0 41.0 33.0 41.0 24-25 37.79122196679974 40.0 35.0 41.0 33.0 41.0 26-27 37.77248225696235 40.0 35.0 41.0 33.0 41.0 28-29 37.73996272063907 40.0 35.0 41.0 33.0 41.0 30-31 37.555295887131905 40.0 35.0 41.0 33.0 41.0 32-33 37.256302100192215 40.0 35.0 41.0 32.5 41.0 34-35 36.950813397392096 40.0 35.0 41.0 31.0 41.0 36-37 36.76457144469887 40.0 35.0 41.0 31.0 41.0 38-39 36.64952542869017 39.5 35.0 41.0 31.0 41.0 40-41 36.49680293139758 39.0 35.0 41.0 30.0 41.0 42-43 36.45270334060638 39.0 35.0 41.0 30.0 41.0 44-45 36.35061843377731 39.0 35.0 41.0 30.0 41.0 46-47 36.27231441741695 39.0 35.0 41.0 30.0 41.0 48-49 36.150124106354326 39.0 35.0 41.0 30.0 41.0 50-51 35.97998138779327 38.5 35.0 40.5 29.5 41.0 52-53 35.789626616954195 38.0 35.0 40.0 29.0 41.0 54-55 35.59627770851066 38.0 35.0 40.0 28.5 41.0 56-57 35.31222638657444 37.0 34.5 40.0 28.0 41.0 58-59 35.03674724463413 37.0 34.0 40.0 27.0 41.0 60-61 34.745440109255554 36.5 34.0 40.0 26.5 41.0 62-63 34.42232950299514 36.0 34.0 39.0 26.0 41.0 64-65 34.13152226471493 35.0 34.0 39.0 26.0 40.5 66-67 33.840720895823594 35.0 34.0 38.5 26.0 40.0 68-69 33.39699709577644 35.0 33.0 37.5 24.5 40.0 70-71 33.15017118634585 35.0 33.0 37.0 25.0 39.5 72-73 32.897770356539155 35.0 33.0 37.0 25.0 39.0 74-75 32.59320489611931 35.0 33.0 36.0 24.0 39.0 76-77 30.546431361618293 33.0 30.0 34.5 20.0 36.0 78-79 31.727290834961778 34.5 31.5 35.0 22.5 37.0 80-81 31.87361582327295 35.0 32.0 35.0 23.0 37.0 82-83 31.713611287609044 35.0 32.0 35.0 22.5 36.0 84-85 31.497761514991666 35.0 32.0 35.0 20.0 36.0 86 31.079664590651337 34.0 31.0 35.0 20.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 14.0 9 28.0 10 31.0 11 51.0 12 92.0 13 207.0 14 612.0 15 1700.0 16 4157.0 17 9454.0 18 20014.0 19 30321.0 20 34796.0 21 33461.0 22 29397.0 23 26212.0 24 26023.0 25 28327.0 26 33524.0 27 40596.0 28 50003.0 29 62235.0 30 78239.0 31 97578.0 32 124639.0 33 166391.0 34 352006.0 35 350149.0 36 373482.0 37 646387.0 38 916726.0 39 465327.0 40 1644.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.14816035869709 23.792229628475177 29.381311466238273 13.67829854658946 2 31.38047526564604 24.990234335974808 30.860497364519517 12.76879303385963 3 29.296667385979003 24.65772721278458 33.12228509544875 12.923320305787666 4 26.028266976770208 27.310441218195404 31.9762307234284 14.685061081605985 5 23.78423726917067 31.868558657923025 29.89479557542989 14.452408497476412 6 22.113859150651976 40.43264639005111 27.054810601065384 10.39868385823153 7 88.15609777053137 3.440735656712183 6.8111135754218965 1.5920529973345483 8 88.76214339091828 2.9327462945424174 6.601164286941684 1.7039460275976168 9 84.12974696190442 5.571523623416015 7.974776114034983 2.323953300644584 10-11 33.97811692022427 30.032126786791828 23.134957980170956 12.854798312812951 12-13 27.499435539624116 24.919339611331566 29.55392145109276 18.02730339795156 14-15 18.773427603211328 29.85649469107533 33.47368665555729 17.89639105015605 16-17 23.689015800894346 27.020418479933184 31.307844700466354 17.982721018706116 18-19 23.988304680725225 28.573845903316432 30.03775890248922 17.400090513469124 20-21 25.769988890620567 27.679088791115692 30.01376933651429 16.537152981749447 22-23 22.501501064981877 23.89118502711408 33.30734567753228 20.299968230371764 24-25 20.89022894113228 27.840896602847675 32.741161949176586 18.527712506843457 26-27 19.69710706564524 31.10492619056182 30.052270029851464 19.145696713941472 28-29 18.119128113523473 29.196925239471067 33.66605275356759 19.017893893437872 30-31 22.481732463764644 27.46533064390443 31.467529541758076 18.58540735057285 32-33 23.67892544727241 28.04879784925611 29.802608706076988 18.469667997394488 34-35 20.496817542429437 28.66331037528123 30.912834829902614 19.927037252386718 36-37 22.396513932680357 29.36626335223526 29.495402395310084 18.7418203197743 38-39 21.05222407378546 30.265428750114893 28.123076838542353 20.559270337557294 40-41 20.88853056478007 28.00080622924484 29.457051558709875 21.653611647265215 42-43 21.171809749879117 27.655548795351642 29.216981066100807 21.955660388668434 44-45 20.651194957620515 29.771613337649207 28.83279834478239 20.744393359947892 46-47 21.599738150328285 29.402041648184333 28.821246887975093 20.176973313512285 48-49 21.272013954659347 28.78689223102714 30.00031969437218 19.940774119941338 50-51 20.29382410415643 29.740155910949134 29.648793253649515 20.31722673124493 52-53 21.56327301100148 27.677003284859676 29.60477283716767 21.154950866971177 54-55 21.1442610864014 27.520989933623458 30.808871718636983 20.52587726133816 56-57 21.315784609912924 27.861127262337206 29.704365126938647 21.118723000811222 58-59 21.774246320517584 28.704346145085296 29.180116308808778 20.341291225588336 60-61 22.575417900487135 29.538723480352786 28.186079108372397 19.69977951078769 62-63 22.531647245233557 27.387505045176813 29.662954715292177 20.41789299429745 64-65 21.527794428526327 29.293632787055575 29.381111657255666 19.797461127162432 66-67 20.33012689868486 29.75351813666135 27.725369546713342 22.19098541794045 68-69 20.15190977425581 31.055873085330425 27.26921812747014 21.522999012943625 70-71 20.210353901670004 29.583805382054756 29.40130485256095 20.80453586371429 72-73 21.739329700806028 29.976342616458666 28.237005422815788 20.047322259919518 74-75 20.488313172606986 31.376166884458456 27.01649722864941 21.119022714285144 76-77 22.36002381723073 29.153104631971832 27.950092211845472 20.536779338951963 78-79 20.009908027925302 29.275824811480224 28.899821770387508 21.814445390206963 80-81 19.118560156490393 29.223399929667238 29.15446583066588 22.503574083176485 82-83 20.185864813238545 29.23289085634134 29.689641702532377 20.89160262788774 84-85 18.849842050999243 28.27240907692246 29.308630948812937 23.56911792326536 86 19.40130235494867 28.617691486938483 29.158998996958907 22.822007161153937 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1734.0 1 2253.0 2 9224.0 3 10329.5 4 5381.0 5 6652.0 6 8072.0 7 8619.0 8 8959.0 9 9413.0 10 9458.0 11 9620.5 12 9792.0 13 9864.0 14 9996.0 15 10152.5 16 10841.5 17 10993.0 18 11030.0 19 11797.5 20 12440.0 21 12733.0 22 13814.0 23 16219.0 24 20442.5 25 25806.0 26 32196.0 27 42219.0 28 48975.5 29 49635.0 30 59217.0 31 73182.0 32 77635.5 33 86284.5 34 98367.0 35 114934.5 36 127998.0 37 122767.5 38 123295.5 39 135981.0 40 151339.0 41 164958.0 42 178665.5 43 187185.0 44 185839.5 45 187527.0 46 194383.0 47 200568.0 48 204302.5 49 194351.0 50 183027.0 51 164859.5 52 140938.5 53 128224.5 54 118091.5 55 110089.0 56 95743.5 57 86228.0 58 79139.5 59 61811.0 60 47268.5 61 38483.0 62 29729.0 63 21410.5 64 17363.0 65 14756.0 66 10078.0 67 7091.5 68 5446.5 69 3889.0 70 2444.5 71 1828.0 72 1510.5 73 935.0 74 453.5 75 214.5 76 201.0 77 214.0 78 153.5 79 82.0 80 61.5 81 41.0 82 40.5 83 27.0 84 15.5 85 10.5 86 4.0 87 8.5 88 7.0 89 7.0 90 10.0 91 4.5 92 1.5 93 1.0 94 1.5 95 1.0 96 0.0 97 0.0 98 0.0 99 1.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 4003824.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.172672031772933 #Duplication Level Percentage of deduplicated Percentage of total 1 80.30058251916002 12.183744025235335 2 7.585243587718141 2.3017682647511197 3 2.200656102224148 1.001694998813003 4 1.0944122545445762 0.664206328230322 5 0.7460638955574351 0.5659891401019929 6 0.534772280580534 0.4868354654959018 7 0.3955390724700477 0.42009692356377903 8 0.3256648407288902 0.39529646565272153 9 0.2750126980711988 0.37554097251665625 >10 3.1371637281655698 11.463146721435804 >50 1.4311081436396427 15.837996133922728 >100 1.961760971180771 51.89036874202168 >500 0.008847986331101175 0.9509795654804735 >1k 0.003004976489807946 0.7703785559483037 >5k 0.0 0.0 >10k+ 1.6694313832266364E-4 0.6919576968302676 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27318 0.6822977233764521 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 7.492836847973338E-5 0.0 0.0 0.021929035841735302 0.0 2 7.492836847973338E-5 0.0 0.0 0.0726555413025148 0.0 3 7.492836847973338E-5 0.0 0.0 0.10949532247171703 0.0 4 7.492836847973338E-5 0.0 0.0 0.15365310762910658 0.0 5 7.492836847973338E-5 0.0 0.0 0.25772861144745624 0.0 6 7.492836847973338E-5 0.0 0.0 0.35086457346776484 0.0 7 7.492836847973338E-5 0.0 0.0 0.4157275644483873 0.0 8 7.492836847973338E-5 0.0 0.0 0.5527465742749931 0.0 9 7.492836847973338E-5 0.0 0.0 0.6071195936684529 0.0 10 7.492836847973338E-5 0.0 0.0 0.7093468643976358 0.0 11 7.492836847973338E-5 0.0 0.0 0.8907484444870704 0.0 12 7.492836847973338E-5 0.0 0.0 1.0224725162744417 0.0 13 7.492836847973338E-5 0.0 0.0 1.0728243798928225 0.0 14 7.492836847973338E-5 0.0 0.0 1.0987995476324635 0.0 15 7.492836847973338E-5 0.0 0.0 1.1360389467668908 0.0 16 7.492836847973338E-5 0.0 0.0 1.2107924823868381 0.0 17 7.492836847973338E-5 0.0 0.0 1.298958195964658 0.0 18 7.492836847973338E-5 0.0 0.0 1.397139334795935 0.0 19 7.492836847973338E-5 0.0 0.0 1.4673971683070983 0.0 20 7.492836847973338E-5 0.0 0.0 1.5440488892618656 0.0 21 7.492836847973338E-5 0.0 0.0 1.6365104959658567 0.0 22 7.492836847973338E-5 0.0 0.0 1.7375139366765373 0.0 23 7.492836847973338E-5 0.0 0.0 1.8389419714752697 0.0 24 7.492836847973338E-5 0.0 0.0 1.9217877708910283 0.0 25 7.492836847973338E-5 0.0 0.0 1.996816043862068 0.0 26 7.492836847973338E-5 0.0 0.0 2.068847182093918 0.0 27 9.990449130631117E-5 0.0 0.0 2.1584615107956795 0.0 28 9.990449130631117E-5 0.0 0.0 2.240283289175548 0.0 29 9.990449130631117E-5 0.0 0.0 2.341736300097107 0.0 30 9.990449130631117E-5 0.0 0.0 2.445087496353486 0.0 31 9.990449130631117E-5 0.0 0.0 2.5396970496205626 0.0 32 9.990449130631117E-5 0.0 0.0 2.6257397927581234 0.0 33 9.990449130631117E-5 0.0 0.0 2.723171647904603 0.0 34 9.990449130631117E-5 0.0 0.0 2.826822557634901 0.0 35 9.990449130631117E-5 0.0 0.0 2.944235311042643 0.0 36 9.990449130631117E-5 0.0 0.0 3.0487603850718714 0.0 37 9.990449130631117E-5 0.0 0.0 3.1676966819720347 0.0 38 9.990449130631117E-5 0.0 0.0 3.2936512693864666 0.0 39 9.990449130631117E-5 0.0 0.0 3.4830701849032324 0.0 40 9.990449130631117E-5 0.0 0.0 3.6243101594875298 0.0 41 9.990449130631117E-5 0.0 0.0 3.766474250616411 0.0 42 9.990449130631117E-5 0.0 0.0 3.9136835185562604 0.0 43 9.990449130631117E-5 0.0 0.0 4.041860980902258 0.0 44 9.990449130631117E-5 0.0 0.0 4.1683400668960475 0.0 45 9.990449130631117E-5 0.0 0.0 4.2995646162268875 0.0 46 1.2488061413288895E-4 0.0 0.0 4.437932336686128 0.0 47 1.2488061413288895E-4 0.0 0.0 4.58716467057493 0.0 48 1.2488061413288895E-4 0.0 0.0 4.73247575317996 0.0 49 1.2488061413288895E-4 0.0 0.0 4.884055842614461 0.0 50 1.2488061413288895E-4 0.0 0.0 5.043653267476293 0.0 51 1.2488061413288895E-4 0.0 0.0 5.212192144310039 0.0 52 1.4985673695946676E-4 0.0 0.0 5.398938614684361 0.0 53 1.4985673695946676E-4 0.0 0.0 5.567402563149629 0.0 54 1.4985673695946676E-4 0.0 0.0 5.734367944245301 0.0 55 1.4985673695946676E-4 0.0 0.0 5.90048413716487 0.0 56 1.4985673695946676E-4 0.0 0.0 6.076590779215071 0.0 57 1.4985673695946676E-4 0.0 0.0 6.258342025024077 0.0 58 1.4985673695946676E-4 0.0 0.0 6.434049049109052 0.0 59 1.7483285978604453E-4 0.0 0.0 6.621494850922518 0.0 60 1.7483285978604453E-4 0.0 0.0 6.815958943250253 0.0 61 1.7483285978604453E-4 0.0 0.0 7.026957228889182 0.0 62 1.7483285978604453E-4 0.0 0.0 7.284835697073597 0.0 63 1.7483285978604453E-4 0.0 0.0 7.508097259020377 0.0 64 1.7483285978604453E-4 0.0 0.0 7.728136901122527 0.0 65 1.7483285978604453E-4 0.0 0.0 7.937661595514688 0.0 66 1.7483285978604453E-4 0.0 0.0 8.144189155167659 0.0 67 1.7483285978604453E-4 0.0 0.0 8.36145644763606 0.0 68 1.7483285978604453E-4 0.0 0.0 8.605648000511511 0.0 69 1.9980898261262234E-4 0.0 0.0 8.936631580209319 0.0 70 2.2478510543920012E-4 0.0 0.0 9.174753935237913 0.0 71 2.2478510543920012E-4 0.0 0.0 9.406357522208769 0.0 72 2.2478510543920012E-4 0.0 0.0 9.638160918162237 0.0 73 2.497612282657779E-4 0.0 0.0 9.872811592117936 0.0 74 2.497612282657779E-4 0.0 0.0 10.13413676525242 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 14980 0.0 71.53538 1 TACGGGA 1640 0.0 66.097565 4 TAGCGGG 2525 0.0 65.58416 3 TACGCGG 205 0.0 64.39024 2 CGTTAGG 570 0.0 63.85965 2 CCGATCC 3690 0.0 63.30623 80 CGATAGG 1105 0.0 62.62443 2 TCGATAG 395 0.0 61.772156 1 ATAGCGG 745 0.0 61.74497 2 TTAGGGA 5830 0.0 61.47513 4 GGGCGAT 2460 0.0 61.463413 7 GTACGGG 1220 0.0 61.311478 3 ACGGGAT 2190 0.0 61.187214 5 TAACGGG 1350 0.0 61.037033 3 TAGGGAC 4280 0.0 60.6542 5 ATAGGGA 6365 0.0 60.64415 4 AGGGTAA 3420 0.0 60.584793 6 CGAGGGA 2960 0.0 59.72973 4 GCGAGGG 3790 0.0 58.99736 3 TAAGGGA 5495 0.0 58.962692 4 >>END_MODULE