##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547776_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2107479 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.825747255370043 31.0 31.0 33.0 30.0 34.0 2 32.2751533941738 33.0 31.0 34.0 31.0 34.0 3 32.4162148234929 34.0 31.0 34.0 31.0 34.0 4 36.00156347939885 37.0 35.0 37.0 35.0 37.0 5 35.95924467100265 37.0 35.0 37.0 35.0 37.0 6 36.00238578889754 37.0 35.0 37.0 35.0 37.0 7 36.268089504094704 37.0 35.0 37.0 35.0 37.0 8 36.23317812419483 37.0 36.0 37.0 35.0 37.0 9 38.10891164277319 39.0 39.0 39.0 37.0 39.0 10-11 37.58369668214962 39.0 37.5 39.0 35.0 39.0 12-13 36.807456681656134 39.0 35.0 39.0 33.0 39.0 14-15 37.8637115719777 40.0 35.0 41.0 33.0 41.0 16-17 38.01996413724645 40.0 35.0 41.0 34.0 41.0 18-19 37.89289430642013 40.0 36.0 41.0 34.0 41.0 20-21 37.711404953501315 40.0 35.0 41.0 33.5 41.0 22-23 37.53232464000827 39.0 35.0 41.0 33.0 41.0 24-25 37.464079357374374 39.0 35.0 41.0 33.0 41.0 26-27 37.44333893718514 39.0 35.0 41.0 33.0 41.0 28-29 37.43177156213656 39.0 35.0 41.0 33.0 41.0 30-31 37.27481246550974 39.0 35.0 41.0 33.0 41.0 32-33 36.96361624481193 39.0 35.0 41.0 32.0 41.0 34-35 36.68398095544487 39.0 35.0 41.0 31.0 41.0 36-37 36.5063296004373 39.0 35.0 41.0 31.0 41.0 38-39 36.43118413042313 39.0 35.0 41.0 31.0 41.0 40-41 36.276613195196724 39.0 35.0 41.0 30.0 41.0 42-43 36.230557457512035 38.5 35.0 41.0 30.0 41.0 44-45 36.1230211546592 38.0 35.0 41.0 30.0 41.0 46-47 36.049278071098215 38.0 35.0 41.0 30.0 41.0 48-49 35.96050114852865 38.0 35.0 40.5 30.0 41.0 50-51 35.76682353655718 38.0 35.0 40.0 29.5 41.0 52-53 35.59425099846784 37.5 35.0 40.0 29.0 41.0 54-55 35.40986553128169 37.0 35.0 40.0 29.0 41.0 56-57 35.12216966337506 36.5 34.5 40.0 28.0 41.0 58-59 34.81999298688148 36.0 34.0 40.0 27.0 41.0 60-61 34.52117435096625 36.0 34.0 39.0 26.5 41.0 62-63 34.1522363923911 35.0 33.5 39.0 26.0 41.0 64-65 33.885568492022934 35.0 33.5 39.0 26.0 40.0 66-67 33.620507487856344 35.0 33.0 38.0 25.5 40.0 68-69 33.21467924472795 35.0 33.0 37.0 24.5 40.0 70-71 32.988826460429735 35.0 33.0 37.0 24.5 39.0 72-73 32.72891663451925 35.0 33.0 36.0 24.0 39.0 74-75 32.43884850098151 35.0 33.0 36.0 23.5 38.5 76-77 30.377043614669468 33.0 29.5 34.5 19.5 36.0 78-79 31.4804351549885 34.0 31.5 35.0 20.0 37.0 80-81 31.70812022326201 35.0 32.0 35.0 20.0 37.0 82-83 31.577472658090542 35.0 32.0 35.0 20.0 36.0 84-85 31.379390731770044 35.0 32.0 35.0 20.0 36.0 86 30.95326738724324 34.0 31.0 35.0 19.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 12.0 10 10.0 11 23.0 12 69.0 13 109.0 14 296.0 15 818.0 16 2030.0 17 4538.0 18 8904.0 19 13750.0 20 16569.0 21 16939.0 22 15498.0 23 14426.0 24 14868.0 25 16872.0 26 19665.0 27 23941.0 28 29346.0 29 36453.0 30 45846.0 31 56421.0 32 70939.0 33 95919.0 34 234221.0 35 221771.0 36 176901.0 37 307502.0 38 435412.0 39 226554.0 40 851.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.447051192443677 23.88090225335579 30.604385619026335 14.067660935174207 2 29.44399445973127 25.544453823739172 31.602450131175686 13.409101585353875 3 28.0753449975065 25.346207482968985 33.83995759862851 12.73848992089601 4 25.891456095173425 27.269927719327214 32.787752570725495 14.05086361477386 5 24.57604559760738 31.334689455980346 30.32257972677308 13.7666852196392 6 23.0570743528168 39.51446254031475 27.195098978447707 10.233364128420734 7 88.57023011854449 3.37403124776095 6.578428539501462 1.4773100941931094 8 89.47050006192232 2.8640854784318135 6.101365660108595 1.5640487995372672 9 84.70670407629211 5.800342494515959 7.305505772536761 2.187447656655179 10-11 39.3606769035421 28.72645468827922 20.233890824060406 11.678977584118275 12-13 29.67351038847837 25.739734535907594 27.785591220600537 16.801163855013503 14-15 15.97102509680998 31.383159689847446 35.517127335551145 17.128687877791428 16-17 21.617226079121075 26.255469212267357 32.93178722065558 19.19551748795599 18-19 23.897343698323922 27.766468847376412 30.823509985152874 17.512677469146787 20-21 25.677029284752066 28.06846473915043 30.247110410115592 16.007395565981916 22-23 21.43141165344945 25.00478059330603 32.28046400462353 21.283343748620982 24-25 19.360786038674643 27.336334074977735 35.26089702435944 18.04198286198819 26-27 17.585821732980495 34.470023188843165 30.238260974367954 17.70589410380839 28-29 16.430436554765198 29.849621277365042 35.58151706375247 18.13842510411729 30-31 21.50754527091373 30.014462777565043 31.06448510281716 17.41350684870407 32-33 25.520396644521725 28.192902515280103 29.24783592149673 17.038864918701442 34-35 19.412459151431637 29.252462302115468 30.82206275839522 20.513015788057675 36-37 22.467270136499582 30.097049602866743 29.96010873655206 17.475571524081616 38-39 19.743114878013017 31.40671864345979 28.46621484721793 20.383951631309255 40-41 20.337640375064236 27.72347909516536 29.44743458890931 22.491445940861094 42-43 20.508745282871146 27.402835330743507 29.245226168327182 22.843193218058165 44-45 19.233667334288977 31.1738337606211 29.022614222964975 20.569884682124947 46-47 20.32777076307759 31.15354886098509 28.39959496630809 20.119085409629232 48-49 21.016176199145995 27.42217122922696 31.661833878297248 19.899818693329806 50-51 18.821041633155065 31.59205856855513 29.45697205049256 20.12992774779725 52-53 21.68579141239367 27.673917509972817 30.487041626512056 20.153249451121457 54-55 21.000541405157534 28.311266684033388 31.294428082082902 19.393763828726172 56-57 21.845840456773235 26.35886288783898 29.78096104397719 22.014335611410598 58-59 23.261062150559983 28.718293278367184 28.553689028455327 19.466955542617505 60-61 23.3274685062105 29.849858527653183 27.517806820376382 19.304866145759934 62-63 22.207552246072204 26.82814395778084 31.377489407960883 19.586814388186074 64-65 19.636803023897272 30.638193785086354 30.446210851923077 19.278792339093297 66-67 19.41082212444347 29.29697045617062 27.210757497464982 24.08144992192093 68-69 18.152517771232834 31.883496822506892 26.956804789039417 23.00718061722086 70-71 19.099692096576053 30.27126248944829 30.004403365347887 20.624642048627766 72-73 22.05561716154704 30.7526195990565 27.700584442359805 19.49117879703665 74-75 20.95565365064136 32.39645567049541 25.85214372242855 20.79574695643468 76-77 23.98291987725619 29.128214326216302 27.046343047783633 19.84252274874388 78-79 19.456160654507116 29.65528956634918 29.961769488569047 20.926780290574662 80-81 17.63573919360525 28.980312496589526 30.94657170961134 22.437376600193883 82-83 18.763603338396255 28.262535474849333 31.25891171394828 21.714949472806136 84-85 17.59493214404509 27.893587551762085 29.921887715132627 24.5895925890602 86 18.395248541029353 28.58922912161877 30.66602324388523 22.349499093466648 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1525.0 1 1980.5 2 5296.0 3 5366.0 4 2859.0 5 3668.0 6 4642.0 7 5090.0 8 5296.0 9 5539.0 10 5306.5 11 5252.0 12 5287.5 13 5154.5 14 5201.0 15 5264.5 16 5255.0 17 5157.5 18 5527.5 19 6144.5 20 7046.5 21 7726.0 22 7240.0 23 8513.5 24 11228.0 25 14436.0 26 17975.5 27 22545.0 28 27253.5 29 28679.0 30 32471.5 31 39300.0 32 46637.5 33 50747.0 34 52891.5 35 57702.0 36 60176.0 37 62821.0 38 66913.5 39 71866.0 40 84780.5 41 96019.0 42 102577.5 43 107307.0 44 107525.5 45 107946.0 46 111199.5 47 114775.5 48 110509.0 49 98144.5 50 90571.0 51 77537.5 52 62492.0 53 56957.0 54 52399.5 55 50848.5 56 47104.0 57 43876.0 58 39722.5 59 30249.5 60 21070.0 61 15352.0 62 12360.0 63 9523.5 64 7821.0 65 5855.0 66 3440.5 67 2518.5 68 1798.0 69 1276.0 70 834.0 71 667.0 72 529.5 73 282.5 74 173.5 75 116.0 76 49.5 77 43.5 78 33.5 79 21.0 80 20.0 81 23.0 82 18.0 83 9.5 84 7.5 85 4.5 86 4.0 87 3.5 88 2.5 89 1.0 90 0.0 91 0.0 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2107479.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.97941667052392 #Duplication Level Percentage of deduplicated Percentage of total 1 80.06593521247977 12.794069398753875 2 7.8987136133055955 2.524336719762993 3 2.3489020369169706 1.1260225309841592 4 1.168714543663805 0.7470150664842065 5 0.7295334044914835 0.582875912271764 6 0.52818497345364 0.5064052661955198 7 0.40249860565075996 0.4502185050298871 8 0.30365662537780674 0.3881804593341729 9 0.2620753811611149 0.37690305431938464 >10 2.936841288356554 11.364857031946636 >50 1.4321458703844787 16.82888127979529 >100 1.9141169633790023 50.48370477825297 >500 0.00598722853730266 0.6285677961098141 >1k 0.0023948914149210638 0.587715672983651 >5k 0.0 0.0 >10k+ 2.9936142686513297E-4 0.6102465277757152 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12757 0.6053203851616078 No Hit AAAATAGGGGAAGCAAGTTTCATGGAATTTTGAAAGTTTTTAAAATTATA 2191 0.10396307626315611 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.038766697082153606 0.0 2 0.0 0.0 0.0 0.1467630282436978 0.0 3 0.0 0.0 0.0 0.21262370823149365 0.0 4 0.0 0.0 0.0 0.3036803688198079 0.0 5 0.0 0.0 0.0 0.5038247118951126 0.0 6 0.0 0.0 0.0 0.6613589032203879 0.0 7 0.0 0.0 0.0 0.7560692182460655 0.0 8 0.0 0.0 0.0 0.9477200010059412 0.0 9 0.0 0.0 0.0 1.0198915386582736 0.0 10 0.0 0.0 0.0 1.1621468114273026 0.0 11 0.0 0.0 0.0 1.4344152420973115 0.0 12 0.0 0.0 0.0 1.6263981752605838 0.0 13 0.0 0.0 0.0 1.7031249184452135 0.0 14 0.0 0.0 0.0 1.7380481608594913 0.0 15 0.0 0.0 0.0 1.789341673155462 0.0 16 0.0 0.0 0.0 1.8959619526457916 0.0 17 0.0 0.0 0.0 2.033519669709639 4.745005762809499E-5 18 0.0 0.0 0.0 2.177815294956676 4.745005762809499E-5 19 0.0 0.0 0.0 2.2869978775589224 4.745005762809499E-5 20 0.0 0.0 0.0 2.403677569266408 4.745005762809499E-5 21 0.0 0.0 0.0 2.536727530855586 4.745005762809499E-5 22 0.0 0.0 0.0 2.679884354719549 4.745005762809499E-5 23 0.0 0.0 0.0 2.8275014840005523 4.745005762809499E-5 24 0.0 0.0 0.0 2.9460791780131617 4.745005762809499E-5 25 0.0 0.0 0.0 3.046720750242351 4.745005762809499E-5 26 0.0 0.0 0.0 3.1482164235088463 4.745005762809499E-5 27 0.0 0.0 0.0 3.2645165147553072 4.745005762809499E-5 28 0.0 0.0 0.0 3.3742684980490907 4.745005762809499E-5 29 4.745005762809499E-5 0.0 0.0 3.5118262151129382 4.745005762809499E-5 30 9.490011525618998E-5 0.0 0.0 3.655220289265041 4.745005762809499E-5 31 9.490011525618998E-5 0.0 0.0 3.786419698606724 4.745005762809499E-5 32 9.490011525618998E-5 0.0 0.0 3.9030519402565815 4.745005762809499E-5 33 9.490011525618998E-5 0.0 0.0 4.020490832886116 4.745005762809499E-5 34 9.490011525618998E-5 0.0 0.0 4.153350994244782 4.745005762809499E-5 35 9.490011525618998E-5 0.0 0.0 4.305143728597058 4.745005762809499E-5 36 9.490011525618998E-5 0.0 0.0 4.444694348081286 4.745005762809499E-5 37 9.490011525618998E-5 0.0 0.0 4.59852743491157 4.745005762809499E-5 38 9.490011525618998E-5 0.0 0.0 4.754733024623258 4.745005762809499E-5 39 9.490011525618998E-5 0.0 0.0 4.99829417042827 4.745005762809499E-5 40 9.490011525618998E-5 0.0 0.0 5.1797906408557335 4.745005762809499E-5 41 9.490011525618998E-5 0.0 0.0 5.353362951659305 4.745005762809499E-5 42 9.490011525618998E-5 0.0 0.0 5.527314862923901 4.745005762809499E-5 43 9.490011525618998E-5 0.0 0.0 5.680958149523673 4.745005762809499E-5 44 9.490011525618998E-5 0.0 0.0 5.8369739390048485 4.745005762809499E-5 45 9.490011525618998E-5 0.0 0.0 6.009170198137205 4.745005762809499E-5 46 9.490011525618998E-5 0.0 0.0 6.198021427497023 4.745005762809499E-5 47 1.4235017288428498E-4 0.0 0.0 6.393325864694263 4.745005762809499E-5 48 1.4235017288428498E-4 0.0 0.0 6.575107035467495 4.745005762809499E-5 49 1.4235017288428498E-4 0.0 0.0 6.762202612695073 4.745005762809499E-5 50 1.4235017288428498E-4 0.0 0.0 6.958645851275387 4.745005762809499E-5 51 1.4235017288428498E-4 0.0 0.0 7.158030993428642 4.745005762809499E-5 52 1.4235017288428498E-4 0.0 0.0 7.395423631742001 4.745005762809499E-5 53 1.4235017288428498E-4 0.0 0.0 7.599743579888578 4.745005762809499E-5 54 1.4235017288428498E-4 0.0 0.0 7.8048701790148325 4.745005762809499E-5 55 1.4235017288428498E-4 0.0 0.0 8.01265398136826 4.745005762809499E-5 56 1.4235017288428498E-4 0.0 0.0 8.22689099155911 4.745005762809499E-5 57 1.4235017288428498E-4 0.0 0.0 8.451472114312883 4.745005762809499E-5 58 1.4235017288428498E-4 0.0 0.0 8.655744612401831 4.745005762809499E-5 59 1.4235017288428498E-4 0.0 0.0 8.872449025589342 4.745005762809499E-5 60 1.4235017288428498E-4 0.0 0.0 9.108655412461998 4.745005762809499E-5 61 1.4235017288428498E-4 0.0 0.0 9.347091952043176 4.745005762809499E-5 62 1.4235017288428498E-4 0.0 0.0 9.642610910950951 4.745005762809499E-5 63 1.4235017288428498E-4 0.0 0.0 9.915211492024357 4.745005762809499E-5 64 1.4235017288428498E-4 0.0 0.0 10.185059969755333 4.745005762809499E-5 65 1.4235017288428498E-4 0.0 0.0 10.427577214292526 4.745005762809499E-5 66 1.4235017288428498E-4 0.0 0.0 10.664969852605886 4.745005762809499E-5 67 1.4235017288428498E-4 0.0 0.0 10.912848953655054 4.745005762809499E-5 68 1.4235017288428498E-4 0.0 0.0 11.207039310949243 4.745005762809499E-5 69 1.4235017288428498E-4 0.0 0.0 11.58896482479778 4.745005762809499E-5 70 1.4235017288428498E-4 0.0 0.0 11.861328155583045 4.745005762809499E-5 71 1.4235017288428498E-4 0.0 0.0 12.113477761818741 4.745005762809499E-5 72 1.4235017288428498E-4 0.0 0.0 12.383421139664975 4.745005762809499E-5 73 1.4235017288428498E-4 0.0 0.0 12.651941015782363 4.745005762809499E-5 74 1.4235017288428498E-4 0.0 0.0 12.961125591287031 4.745005762809499E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TAATACG 80 0.0 80.0 1 CTACGCG 85 0.0 75.29412 1 CGTTAGG 455 0.0 73.84616 2 TTAGGCG 65 0.0 73.84615 1 TCGTAAG 95 0.0 71.57895 1 CGTTTTT 6860 0.0 71.195335 1 GTTAGCG 90 0.0 66.666664 1 ACGGGAT 1295 0.0 65.791504 5 TACGGGA 940 0.0 65.53191 4 AGGGATT 4565 0.0 65.454544 6 TACGCGG 190 0.0 65.26316 2 CGTAAGG 365 0.0 64.65754 2 GGGCGAT 1480 0.0 64.324326 7 CGAGGGA 1395 0.0 64.22939 4 GCTAACG 50 3.0013325E-10 64.0 1 TGTAGGG 3070 0.0 63.061886 3 GCGAGGG 1755 0.0 62.905987 3 CTCGCGG 70 0.0 62.857143 1 GCGTAAG 140 0.0 62.857143 1 ATTACCG 45 9.427822E-9 62.22222 1 >>END_MODULE