##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547775_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1817953 Sequences flagged as poor quality 0 Sequence length 86 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 32.28717629113624 33.0 31.0 34.0 31.0 34.0 2 32.80487174310887 34.0 31.0 34.0 31.0 34.0 3 32.92839968910087 34.0 31.0 34.0 31.0 34.0 4 36.39721543956307 37.0 37.0 37.0 35.0 37.0 5 36.37268455235091 37.0 37.0 37.0 35.0 37.0 6 36.44441798000278 37.0 37.0 37.0 35.0 37.0 7 36.48039635788164 37.0 37.0 37.0 35.0 37.0 8 36.43104249669821 37.0 37.0 37.0 35.0 37.0 9 38.2928667572814 39.0 39.0 39.0 37.0 39.0 10-11 38.07057085634227 39.0 38.5 39.0 36.0 39.0 12-13 37.59293034528395 39.0 37.0 39.0 35.0 39.0 14-15 38.881218601360985 41.0 38.0 41.0 35.0 41.0 16-17 38.97447211231534 41.0 38.0 41.0 35.0 41.0 18-19 38.83244066265739 40.0 37.5 41.0 35.0 41.0 20-21 38.58185910196798 40.0 36.0 41.0 35.0 41.0 22-23 38.38264245555303 40.0 35.5 41.0 35.0 41.0 24-25 38.379195721781585 40.0 35.0 41.0 35.0 41.0 26-27 38.33682581452876 40.0 35.0 41.0 35.0 41.0 28-29 38.29025392845689 40.0 36.0 41.0 35.0 41.0 30-31 38.144356592277134 40.0 35.5 41.0 35.0 41.0 32-33 37.6820789646377 40.0 35.0 41.0 34.0 41.0 34-35 37.27515122778202 40.0 35.0 41.0 33.5 41.0 36-37 37.04910880534315 40.0 35.0 41.0 33.0 41.0 38-39 36.922292545516854 40.0 35.0 41.0 33.0 41.0 40-41 36.809668896830665 40.0 35.0 41.0 32.0 41.0 42-43 36.729302957777236 40.0 35.0 41.0 32.0 41.0 44-45 36.67339859721346 40.0 35.0 41.0 32.0 41.0 46-47 36.55830211232084 40.0 35.0 41.0 32.0 41.0 48-49 36.48396080646749 39.0 35.0 41.0 32.0 41.0 50-51 36.300093291740765 39.0 35.0 41.0 31.0 41.0 52-53 36.0831437886458 39.0 35.0 41.0 31.0 41.0 54-55 35.93595213957677 38.5 35.0 40.5 31.0 41.0 56-57 35.713682091891265 38.0 35.0 40.0 30.0 41.0 58-59 35.491586416150476 37.0 35.0 40.0 29.5 41.0 60-61 35.16533238208029 37.0 35.0 40.0 29.0 41.0 62-63 34.74105106127607 36.0 34.5 40.0 27.5 41.0 64-65 34.41397274847039 36.0 34.0 39.0 27.0 41.0 66-67 34.16965812647521 35.0 34.0 39.0 26.0 40.5 68-69 33.688071418788056 35.0 34.0 38.5 24.5 40.0 70-71 33.38513949480542 35.0 34.0 37.0 24.5 40.0 72-73 33.05836454517801 35.0 34.0 37.0 24.0 39.0 74-75 32.74477447986829 35.0 34.0 36.5 23.5 39.0 76-77 30.806102247967907 33.5 31.0 35.0 18.5 36.5 78-79 31.774755452973757 35.0 32.5 35.0 19.5 37.0 80-81 31.87838299449986 35.0 33.0 35.0 19.0 37.0 82-83 31.658734851781098 35.0 33.0 35.0 18.0 36.5 84-85 31.419958051720812 35.0 33.0 35.0 16.0 36.0 86 30.983749304850015 35.0 32.0 35.0 15.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 3.0 9 11.0 10 12.0 11 16.0 12 22.0 13 44.0 14 169.0 15 478.0 16 1444.0 17 4066.0 18 10179.0 19 17481.0 20 21058.0 21 21508.0 22 17117.0 23 12451.0 24 10360.0 25 9416.0 26 9986.0 27 11592.0 28 14256.0 29 17569.0 30 22518.0 31 28938.0 32 36207.0 33 49222.0 34 154234.0 35 170429.0 36 143416.0 37 279778.0 38 478283.0 39 274566.0 40 1122.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.15867131878547 24.085716187382182 30.91768599078194 13.83792650305041 2 29.51148902089328 27.836363206309517 29.89582238924769 12.75632538354952 3 26.71972267709891 27.42837686122799 33.25223479374879 12.59966566792431 4 25.70770531471386 26.233406474204777 34.4936310234643 13.56525718761706 5 25.970363370230142 30.49072225739609 30.208096688968304 13.330817683405458 6 21.489499453506227 41.39793493011095 26.74326563998079 10.36929997640203 7 86.01812038044989 3.299865288046501 9.232251878898959 1.4497624526046602 8 86.89581083779395 5.1520033796253255 6.6299843835346675 1.32220139904607 9 82.04442029029353 6.277224988764836 7.7005291115886925 3.977825609352937 10-11 36.22062836607987 30.722796463934987 22.209457560233954 10.847117609751187 12-13 27.400515854920343 26.70924385833957 29.38747591384376 16.50276437289633 14-15 15.705686560653659 33.23548518581064 34.15984901699879 16.898979236536917 16-17 20.086245353977798 29.406178267534973 31.85956952682495 18.648006851662284 18-19 21.59998085759093 29.79840512928552 30.56030601451193 18.041307998611625 20-21 24.5408709686114 30.25950065815783 30.08647638305281 15.113151990177965 22-23 20.234021451599684 26.70454076645546 33.12753410016651 19.93390368177835 24-25 17.470171121035584 31.743174878558467 33.64448915896065 17.142164841445297 26-27 17.41142372767613 35.36925872121006 30.48874200818173 16.730575542932076 28-29 15.393247240165175 31.95077100453092 35.43017888801306 17.22580286729085 30-31 20.06039210034583 32.24813842822119 30.559755945285715 17.131713526147266 32-33 23.883565746749227 31.100611511958782 28.682919745449965 16.332902995842026 34-35 19.005331821009676 31.254438371069 30.10715898595838 19.633070821962946 36-37 20.545993213245886 32.83379713336924 29.338849794246606 17.281359859138274 38-39 18.98376910734216 33.09739030657008 28.342701929037766 19.57613865704999 40-41 19.991275902072275 29.994229773817032 28.819474430857124 21.195019893253566 42-43 19.918639260750965 29.857730095332496 29.18601305974357 21.037617584172967 44-45 18.785771689367106 34.03171039075268 28.170475254310755 19.01204266556946 46-47 19.76230958666148 33.377348039250734 28.15592592327744 18.704416450810335 48-49 20.56565818808297 30.69031487612716 29.942743294243577 18.801283641546288 50-51 18.657578056198375 33.5147003250359 28.200399020216693 19.62732259854903 52-53 20.74401813468225 30.412282385738244 29.500405125985107 19.343294353594402 54-55 20.400169861377055 30.577055622450082 30.621446209005406 18.401328307167457 56-57 20.48493552913634 29.21962228946513 29.9412306038715 20.354211577527032 58-59 21.401570887696217 30.5013660969233 28.730775768130417 19.366287247250067 60-61 21.667831896644195 32.11403155087068 27.55841322630453 18.6597233261806 62-63 21.060170422447666 30.329111918734974 30.209746896646944 18.400970762170417 64-65 18.9403136384714 33.28991453574432 29.48800106493402 18.281770760850254 66-67 18.29898792763069 32.5959196964938 26.487483449792155 22.617608926083346 68-69 17.388458337481772 34.99303887394228 26.12905834199234 21.4894444465836 70-71 18.53491261875307 33.27995828274988 28.31772878616774 19.867400312329305 72-73 20.156434187242464 33.79339289849628 27.328539296670485 18.721633617590776 74-75 19.609610369464995 34.953406386193706 25.209700140762713 20.227283103578586 76-77 22.27274302470966 32.565940923665245 26.54884367197612 18.612472379648977 78-79 18.114302184929972 33.10825417378777 28.767822930515806 20.00962071076645 80-81 16.727165113729566 32.69498716413461 29.335824413502436 21.242023308633392 82-83 18.151184326547494 31.132185485543356 30.101273245237913 20.615356942671234 84-85 16.69080553787694 31.607967862755526 28.698926759932736 23.00229983943479 86 17.47245390832436 31.082651751722956 29.629478869915776 21.815415470036903 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1590.0 1 1760.0 2 5653.5 3 5933.0 4 3008.5 5 4786.5 6 7249.5 7 8454.0 8 9137.5 9 9681.5 10 9143.5 11 8426.0 12 7685.0 13 7202.5 14 7142.0 15 6954.0 16 7050.0 17 6997.0 18 6944.0 19 7297.0 20 7523.5 21 7681.0 22 8051.0 23 9617.0 24 11406.5 25 13548.5 26 16492.5 27 21074.5 28 26062.0 29 27863.0 30 30521.0 31 37292.5 32 42787.5 33 46478.5 34 51445.0 35 57159.0 36 60216.0 37 60426.5 38 64350.0 39 68630.5 40 75277.0 41 85295.5 42 92569.0 43 95903.0 44 95013.5 45 94494.0 46 95351.5 47 95643.5 48 91608.5 49 79476.5 50 71184.0 51 63875.0 52 50130.0 53 41379.5 54 36191.0 55 31464.5 56 26673.5 57 23735.0 58 20281.5 59 15047.5 60 12126.5 61 9724.5 62 6885.5 63 4244.0 64 3180.0 65 2518.0 66 1523.0 67 1014.5 68 670.5 69 380.5 70 178.5 71 98.0 72 89.5 73 68.0 74 44.5 75 35.0 76 29.5 77 21.0 78 16.5 79 14.0 80 12.0 81 7.0 82 4.5 83 4.0 84 2.0 85 3.0 86 5.0 87 2.5 88 0.5 89 2.0 90 2.5 91 1.0 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1817953.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.176388120502367 #Duplication Level Percentage of deduplicated Percentage of total 1 77.4893339204827 13.3098687461742 2 7.276947458470498 2.4998334775838513 3 2.5532791880055212 1.3156834293955189 4 1.5014310366505874 1.031566488867148 5 1.0772482226786795 0.9251616787425178 6 0.8197780591365512 0.8448495669840926 7 0.6842202749866366 0.822670310216113 8 0.5404780926169204 0.7426769191533639 9 0.45447718229057066 0.7025648827441632 >10 4.417006219495124 17.74444822575029 >50 1.7746321345031766 22.098892166525065 >100 1.403407432255798 35.54662700068019 >500 0.004850486517007276 0.5633126366868658 >1k 0.0022635603746033956 0.640405709031706 >5k 3.233657678004851E-4 0.32259118456688196 >10k+ 3.233657678004851E-4 0.8888475768980392 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16003 0.8802757827072537 No Hit GAATGATACCTGTCTCTTATACACATCTGACGCTAACGCGATCGTATGCC 5808 0.31948020658399856 No Hit GAATGATACGGCTGTCTCTTATACACATCTGACGCTAACGCGATCGTATG 2287 0.12580083203471157 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2078 0.11430438520687827 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1907 0.10489820143865106 No Hit GAATCTGTCTCTTATACACATCTGACGCTAACGCGATCGTATGCCGTCTT 1898 0.10440313913506014 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.019747485221015066 0.0 2 0.0 0.0 0.0 0.09450189306324201 0.0 3 0.0 0.0 0.0 0.14004762499360546 0.0 4 0.0 0.0 0.0 0.24494582643225649 0.0 5 0.0 0.0 0.0 0.49346710283489176 0.0 6 0.0 0.0 0.0 0.6221282948459064 0.0 7 0.0 0.0 0.0 0.7485892099520725 0.0 8 0.0 0.0 0.0 0.960035820508011 0.0 9 0.0 0.0 0.0 1.0415010729100258 0.0 10 0.0 0.0 0.0 1.4956932329933723 0.0 11 0.0 0.0 0.0 1.7411891286518408 0.0 12 0.0 0.0 0.0 2.0501080060925667 0.0 13 0.0 0.0 0.0 2.1188116524464604 0.0 14 0.0 0.0 0.0 2.1530809652394756 0.0 15 0.0 0.0 0.0 2.217934127009884 0.0 16 0.0 0.0 0.0 2.309025590870611 0.0 17 0.0 0.0 0.0 2.4090831831185953 0.0 18 0.0 0.0 0.0 2.5144764468608374 0.0 19 0.0 0.0 0.0 2.6582645425926854 0.0 20 0.0 0.0 0.0 2.752656421810685 0.0 21 0.0 0.0 0.0 2.852383972522942 0.0 22 0.0 0.0 0.0 2.9809901576113353 0.0 23 0.0 0.0 0.0 3.0985949581754864 0.0 24 0.0 0.0 0.0 3.18864129050641 0.0 25 0.0 0.0 0.0 3.267521217545228 0.0 26 0.0 0.0 0.0 3.344035846911334 0.0 27 0.0 0.0 0.0 3.4391978230460305 0.0 28 0.0 0.0 0.0 3.5311143907460756 0.0 29 0.0 0.0 0.0 3.6428334505897566 0.0 30 0.0 0.0 0.0 3.756807794260908 0.0 31 5.500692262121188E-5 0.0 0.0 3.8584605872649074 0.0 32 5.500692262121188E-5 0.0 0.0 3.9571430064473616 0.0 33 5.500692262121188E-5 0.0 0.0 4.0569805710048605 0.0 34 5.500692262121188E-5 0.0 0.0 4.1736502538844515 0.0 35 5.500692262121188E-5 0.0 0.0 4.301156300520421 0.0 36 5.500692262121188E-5 0.0 0.0 4.4173859280190415 0.0 37 5.500692262121188E-5 0.0 0.0 4.543296773898995 0.0 38 5.500692262121188E-5 0.0 0.0 4.678998852005525 0.0 39 5.500692262121188E-5 0.0 0.0 4.870862998108312 0.0 40 5.500692262121188E-5 0.0 0.0 5.0152561699889935 0.0 41 5.500692262121188E-5 0.0 0.0 5.163829867988887 0.0 42 5.500692262121188E-5 0.0 0.0 5.319994521310507 0.0 43 5.500692262121188E-5 0.0 0.0 5.4621324093637185 0.0 44 5.500692262121188E-5 0.0 0.0 5.612246301197006 0.0 45 5.500692262121188E-5 0.0 0.0 5.768906016822217 0.0 46 5.500692262121188E-5 0.0 0.0 5.93695216543002 0.0 47 5.500692262121188E-5 0.0 0.0 6.10444824481161 0.0 48 5.500692262121188E-5 0.0 0.0 6.27650989877076 0.0 49 5.500692262121188E-5 0.0 0.0 6.445986227366714 0.0 50 5.500692262121188E-5 0.0 0.0 6.628609210469137 0.0 51 5.500692262121188E-5 0.0 0.0 6.81299241509544 0.0 52 5.500692262121188E-5 0.0 0.0 7.023393894121575 0.0 53 5.500692262121188E-5 0.0 0.0 7.226699480129574 0.0 54 5.500692262121188E-5 0.0 0.0 7.417518494702558 0.0 55 5.500692262121188E-5 0.0 0.0 7.611142862329224 0.0 56 5.500692262121188E-5 0.0 0.0 7.819014022914784 0.0 57 5.500692262121188E-5 0.0 0.0 8.022209595077541 0.0 58 5.500692262121188E-5 0.0 0.0 8.234976371776389 0.0 59 5.500692262121188E-5 0.0 0.0 8.461384865285297 0.0 60 5.500692262121188E-5 0.0 0.0 8.685923123425082 0.0 61 5.500692262121188E-5 0.0 0.0 8.93989008516722 0.0 62 5.500692262121188E-5 0.0 0.0 9.221690549755687 0.0 63 5.500692262121188E-5 0.0 0.0 9.487649020629247 0.0 64 5.500692262121188E-5 0.0 0.0 9.74431132157982 0.0 65 5.500692262121188E-5 0.0 0.0 9.99569295795876 0.0 66 5.500692262121188E-5 0.0 0.0 10.23909859055762 0.0 67 5.500692262121188E-5 0.0 0.0 10.49411068382956 0.0 68 5.500692262121188E-5 0.0 0.0 10.778551480703847 0.0 69 5.500692262121188E-5 0.0 0.0 11.141927211539572 0.0 70 5.500692262121188E-5 0.0 0.0 11.419052087705237 0.0 71 5.500692262121188E-5 0.0 0.0 11.692106451596933 0.0 72 5.500692262121188E-5 0.0 0.0 11.968681258536387 0.0 73 5.500692262121188E-5 0.0 0.0 12.247621363148552 0.0 74 5.500692262121188E-5 0.0 0.0 12.54212842686252 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position AGTCGCG 25 1.2851069E-6 80.0 1 CGTTTTT 7810 0.0 73.34187 1 TACGGGA 870 0.0 70.804596 4 TCTATCG 75 0.0 69.33333 1 TACGTCG 35 1.1818702E-7 68.57143 1 CGCGAGG 170 0.0 68.23529 2 GGGCGAT 1390 0.0 67.050354 7 AATCGCG 30 3.7964728E-6 66.666664 1 GGATCGC 115 0.0 66.08696 8 CGAGGGA 1350 0.0 65.48148 4 ACGGGTA 180 0.0 64.44444 5 TTTGCGG 510 0.0 64.31372 2 ATCCGCG 25 1.2357194E-4 64.0 1 AGGGATT 4120 0.0 63.786407 6 TCGATTG 70 0.0 62.857143 1 TTAGGGA 2825 0.0 62.725662 4 TACGAAG 115 0.0 62.608696 1 TTGCGAG 275 0.0 62.545456 1 GGGACCG 660 0.0 61.818184 7 AGTAGGG 3440 0.0 61.627903 3 >>END_MODULE