##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547774_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1215686 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.819825185121815 31.0 31.0 33.0 30.0 34.0 2 32.25106318572394 33.0 31.0 34.0 31.0 34.0 3 32.39396439541132 34.0 31.0 34.0 31.0 34.0 4 35.96659992794192 37.0 35.0 37.0 35.0 37.0 5 35.91066278627869 37.0 35.0 37.0 35.0 37.0 6 35.97361242952539 37.0 35.0 37.0 35.0 37.0 7 36.23231492342595 37.0 35.0 37.0 35.0 37.0 8 36.185679525798605 37.0 36.0 37.0 35.0 37.0 9 38.08733998746387 39.0 39.0 39.0 37.0 39.0 10-11 37.54890243039732 39.0 37.5 39.0 35.0 39.0 12-13 36.109329629526044 37.0 35.0 39.0 32.5 39.0 14-15 37.00643628371142 38.0 35.0 41.0 33.0 41.0 16-17 37.31361675630056 38.5 35.0 41.0 33.5 41.0 18-19 37.193623188882654 38.0 35.0 41.0 33.0 41.0 20-21 36.92639341079851 38.0 35.0 41.0 33.0 41.0 22-23 36.68714084064471 37.0 35.0 41.0 33.0 41.0 24-25 36.616227381083604 37.0 35.0 41.0 33.0 41.0 26-27 36.53939339599206 37.0 35.0 41.0 33.0 41.0 28-29 36.607722717872875 37.0 35.0 41.0 33.0 41.0 30-31 36.42212709531903 36.0 35.0 41.0 32.5 41.0 32-33 35.978841164577034 36.0 35.0 40.5 31.0 41.0 34-35 35.69496605208911 36.0 35.0 40.0 30.5 41.0 36-37 35.42935305662811 36.0 35.0 40.0 30.0 41.0 38-39 35.41659729568326 36.0 35.0 40.0 30.0 41.0 40-41 35.24937607243976 36.0 35.0 40.0 29.0 41.0 42-43 35.153393228185564 35.5 35.0 40.0 29.0 41.0 44-45 34.99018619939689 35.0 34.5 40.0 28.5 41.0 46-47 34.87641915757852 35.0 34.0 40.0 28.0 41.0 48-49 34.850924909886274 35.5 34.0 40.0 28.0 41.0 50-51 34.6880082521309 35.0 34.0 40.0 28.0 41.0 52-53 34.48308773811659 35.0 34.0 40.0 27.0 41.0 54-55 34.29228517890311 35.0 34.0 39.0 26.5 41.0 56-57 33.95874757133009 35.0 34.0 39.0 25.5 41.0 58-59 33.68409893673201 35.0 34.0 38.5 25.0 40.5 60-61 33.377828238541866 35.0 33.0 38.0 24.5 40.0 62-63 32.89861814646216 35.0 32.5 37.0 22.5 40.0 64-65 32.68429635613143 35.0 32.5 37.0 23.0 40.0 66-67 32.52067639176563 35.0 33.0 36.0 22.0 39.5 68-69 32.3140704096288 35.0 33.0 36.0 21.0 39.0 70-71 32.11957281732289 35.0 33.0 35.0 20.0 38.5 72-73 31.9085602696749 35.0 32.5 35.0 20.0 37.5 74-75 31.6486563964708 35.0 32.0 35.0 19.5 37.0 76-77 29.61277624320754 32.5 28.5 34.5 16.0 35.5 78-79 30.537023129327807 34.0 30.5 35.0 17.0 36.0 80-81 31.08895882653909 34.5 31.5 35.0 18.5 36.0 82-83 31.028186554751805 34.5 31.5 35.0 18.0 36.0 84-85 30.939803534794347 34.5 31.5 35.0 18.0 35.5 86 30.564431933903986 34.0 31.0 35.0 17.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 2.0 10 5.0 11 6.0 12 17.0 13 70.0 14 241.0 15 805.0 16 1935.0 17 4279.0 18 7985.0 19 11313.0 20 13131.0 21 12986.0 22 10787.0 23 9476.0 24 9729.0 25 11011.0 26 13002.0 27 15911.0 28 19208.0 29 23811.0 30 29253.0 31 36577.0 32 45908.0 33 65169.0 34 199984.0 35 173460.0 36 85881.0 37 148899.0 38 181608.0 39 82827.0 40 409.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.623215205242143 24.106553830512155 29.852280934386016 14.417950029859682 2 29.922940627760784 25.76643968919606 30.92393924088951 13.386680442153647 3 29.604848620449687 24.328897429105872 32.88974291058711 13.176511039857331 4 25.576834807672377 28.142875709681615 32.41725248131508 13.863037001330936 5 23.444129487384078 33.11899618816043 29.903034171652877 13.533840152802615 6 22.250317927491146 39.96171708812967 27.107328701654872 10.680636282724322 7 86.65823247121378 4.485451012843777 7.161964520443602 1.6943519954988377 8 87.42315038587267 3.784200854496967 6.857856387257893 1.9347923723724711 9 84.08503511597567 5.9794223179340715 7.741061425400968 2.19448114068929 10-11 50.76179210750145 23.34200607722718 16.779785240596667 9.11641657467471 12-13 33.6645729242584 32.14086532213088 22.03352674950604 12.161035004104678 14-15 11.347790465630105 37.385023764360206 37.64351979047221 13.623665979537481 16-17 15.577953517602408 22.264589704907355 37.79195450140908 24.36550227608116 18-19 23.94236669666345 26.129897029331588 30.21964553346835 19.70809074053662 20-21 26.637059240626282 27.59643526371119 28.18034426652935 17.586161229133182 22-23 19.58910442334616 27.58113526025635 27.597915909206815 25.231844407190675 24-25 16.15170364715889 26.5117801800794 39.02113703703095 18.315379135730772 26-27 14.371803245245896 39.82430496032693 29.173980781221466 16.62991101320571 28-29 13.008046485687915 29.170279167482395 40.38156234422375 17.440112002605936 30-31 23.39510366986212 32.021755617815785 28.664967763057238 15.918172949264859 32-33 28.099155538518993 30.11974309155489 25.73781387628055 16.043287493645565 34-35 18.165875069713724 30.36137621063334 28.394749960104832 23.07799875954811 36-37 24.279830482542366 30.040117267123257 29.83628173722491 15.84377051310947 38-39 17.450312004909165 34.17975529865443 27.876606294717547 20.493326401718864 40-41 20.37672556893803 26.73177942330503 27.930115177767945 24.961379829988996 42-43 21.611583912293142 25.257303283907195 27.299236809505086 25.831875994294577 44-45 17.06431595000683 37.252670508667535 25.48807833601769 20.19493520530795 46-47 20.756305493359307 33.681518089375054 26.073097822957575 19.489078594308072 48-49 20.89437568582677 25.67126708706031 32.47619039784945 20.958166829263476 50-51 18.441974325607106 34.72866348711756 26.518114052477365 20.311248134797964 52-53 23.598898070718917 25.957936506630823 29.619572817322894 20.823592605327363 54-55 24.0309997811935 28.273830577961746 30.027243877119584 17.667925763725172 56-57 24.50065230659891 22.90365275243772 28.775933917146368 23.819761023817005 58-59 25.800412277512454 26.835918156497645 27.152282744063843 20.211386821926055 60-61 26.102998636160983 30.870841648254565 24.744341877754618 18.281817837829834 62-63 24.86756448622424 25.14189519333117 31.66348053691496 18.327059783529627 64-65 17.45693378059795 33.110523605602104 31.10239815215442 18.330144461645524 66-67 15.68776805852827 29.380407440737166 23.052375366665405 31.87944913406916 68-69 15.716599516651502 35.07443533938863 21.32569594451199 27.883269199447884 70-71 18.713096967473508 31.455902264235995 27.77349578756356 22.05750498072693 72-73 25.020070972274087 30.767690012059035 25.279677482507818 18.932561533159056 74-75 24.219453049553916 33.920683465960785 20.382442505712824 21.47742097877248 76-77 31.96697173447749 27.927236144859773 23.337605269781836 16.7681868508809 78-79 19.050231721020065 30.40962057636594 30.804253729992777 19.73589397262122 80-81 14.747928330177364 29.056968658025177 33.58906000398129 22.60604300781616 82-83 18.694712285902774 25.03191613623913 34.15014238874183 22.12322918911627 84-85 14.405323414105286 25.981297802228536 31.17412720060937 28.43925158305681 86 18.330391235894794 24.854444321971297 33.344547851994676 23.47061659013923 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2446.0 1 2273.0 2 3438.0 3 3163.5 4 1773.5 5 2499.5 6 3145.0 7 3287.0 8 3658.5 9 3662.5 10 3044.0 11 2691.0 12 2646.0 13 2671.5 14 2640.0 15 2842.0 16 3127.0 17 3425.0 18 3543.5 19 3870.0 20 4117.5 21 3942.0 22 3813.5 23 4263.5 24 5307.0 25 5667.5 26 6028.0 27 8787.0 28 12033.5 29 12986.0 30 15104.5 31 18357.5 32 19145.0 33 19082.5 34 19386.0 35 20910.5 36 22416.0 37 25049.5 38 29467.5 39 36312.5 40 45057.0 41 55852.0 42 68213.5 43 73464.0 44 77653.0 45 82540.5 46 85431.0 47 91377.0 48 86388.0 49 65937.5 50 54230.0 51 45388.5 52 31125.5 53 24587.0 54 23501.0 55 24015.5 56 23868.5 57 23238.0 58 21348.0 59 15816.0 60 10965.0 61 8855.0 62 6889.5 63 4618.5 64 3412.0 65 3358.0 66 2544.5 67 1659.5 68 1141.5 69 638.5 70 482.5 71 437.0 72 317.5 73 200.5 74 126.5 75 73.5 76 76.5 77 49.0 78 25.5 79 9.0 80 10.0 81 8.5 82 6.0 83 4.5 84 2.0 85 1.5 86 2.0 87 1.0 88 0.5 89 0.5 90 0.5 91 0.5 92 0.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1215686.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.322846084504837 #Duplication Level Percentage of deduplicated Percentage of total 1 81.81339286086481 12.536140264581586 2 8.68342904071663 2.6610969335324084 3 2.476185260822248 1.1382661688489633 4 1.112459529289691 0.6818418457018656 5 0.6258783399193186 0.479511873510456 6 0.4065282366709663 0.37375017597086235 7 0.295235102476039 0.3166689423788351 8 0.23329967215061914 0.28598519743435014 9 0.17516404570445857 0.24156105406817308 >10 1.6142330761029076 5.278302830388074 >50 0.6190181501999342 7.034479662626918 >100 1.919226579222503 65.39240431765222 >500 0.02108446101117679 1.9082072968735475 >1k 0.004325017643318316 1.0587713245643937 >5k 5.406272054147895E-4 0.6130121118673432 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7400 0.6087098148699582 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3543 0.2914403883897651 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 2033 0.16723068292305743 No Hit GATACTGAAGCTACGAATATACTGACTATGAAGACCTATGCTTTGATTCA 1328 0.10923873434423034 No Hit GTGGAGGGGAATTTTGTTTTGCTTTGTTTTGATCTTCATCTTTGTATTCA 1245 0.10241131344771594 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 8.22580830905349E-5 0.0 0.0 0.061858078484082236 0.0 2 8.22580830905349E-5 0.0 0.0 0.20260165865198743 0.0 3 8.22580830905349E-5 0.0 0.0 0.2777032885136458 0.0 4 8.22580830905349E-5 0.0 0.0 0.42379364408243575 0.0 5 8.22580830905349E-5 0.0 0.0 0.6445743390974314 0.0 6 8.22580830905349E-5 0.0 0.0 0.8625582592873489 0.0 7 8.22580830905349E-5 0.0 0.0 0.9774728013648261 0.0 8 8.22580830905349E-5 0.0 0.0 1.237655118180188 0.0 9 8.22580830905349E-5 0.0 0.0 1.3273986868319616 0.0 10 8.22580830905349E-5 0.0 0.0 1.4905987236835827 0.0 11 1.645161661810698E-4 0.0 0.0 1.8075391178314137 0.0 12 1.645161661810698E-4 0.0 0.0 2.021903682365348 0.0 13 1.645161661810698E-4 0.0 0.0 2.095606924814467 0.0 14 1.645161661810698E-4 0.0 0.0 2.1297440292970387 0.0 15 1.645161661810698E-4 0.0 0.0 2.1814843635609855 0.0 16 1.645161661810698E-4 0.0 0.0 2.299277938546631 0.0 17 1.645161661810698E-4 0.0 0.0 2.424145708678063 0.0 18 1.645161661810698E-4 0.0 0.0 2.587263487446594 0.0 19 1.645161661810698E-4 0.0 0.0 2.6766780237660055 0.0 20 1.645161661810698E-4 0.0 0.0 2.7696296576583097 0.0 21 1.645161661810698E-4 0.0 0.0 2.8853667805666925 0.0 22 1.645161661810698E-4 0.0 0.0 2.9919732562520256 0.0 23 1.645161661810698E-4 0.0 0.0 3.1249845766094206 0.0 24 1.645161661810698E-4 0.0 0.0 3.2114378219375728 0.0 25 1.645161661810698E-4 0.0 0.0 3.292215259532478 0.0 26 1.645161661810698E-4 0.0 0.0 3.3651781792337823 0.0 27 1.645161661810698E-4 0.0 0.0 3.4386346474336302 0.0 28 1.645161661810698E-4 0.0 0.0 3.519658859277807 0.0 29 1.645161661810698E-4 0.0 0.0 3.6149959775797367 0.0 30 1.645161661810698E-4 0.0 0.0 3.735010520808827 0.0 31 1.645161661810698E-4 0.0 0.0 3.8540379670408313 0.0 32 1.645161661810698E-4 0.0 0.0 3.944768632689691 0.0 33 1.645161661810698E-4 0.0 0.0 4.043478332398333 0.0 34 1.645161661810698E-4 0.0 0.0 4.1418589997746125 0.0 35 1.645161661810698E-4 0.0 0.0 4.292309033747201 0.0 36 1.645161661810698E-4 0.0 0.0 4.398997767515625 0.0 37 1.645161661810698E-4 0.0 0.0 4.516215535919637 0.0 38 1.645161661810698E-4 0.0 0.0 4.622904269688061 0.0 39 1.645161661810698E-4 0.0 0.0 4.744975264994415 0.0 40 1.645161661810698E-4 0.0 0.0 4.8747785201112785 0.0 41 1.645161661810698E-4 0.0 0.0 5.014535003282098 0.0 42 1.645161661810698E-4 0.0 0.0 5.1370995470869945 0.0 43 2.4677424927160467E-4 0.0 0.0 5.246667313763587 0.0 44 2.4677424927160467E-4 0.0 0.0 5.389220571759484 0.0 45 2.4677424927160467E-4 0.0 0.0 5.528977054930302 0.0 46 2.4677424927160467E-4 0.0 0.0 5.683375476891237 0.0 47 2.4677424927160467E-4 0.0 0.0 5.832920671949829 0.0 48 2.4677424927160467E-4 0.0 0.0 5.984193286753323 0.0 49 2.4677424927160467E-4 0.0 0.0 6.153644937919824 0.0 50 2.4677424927160467E-4 0.0 0.0 6.3287723968195735 0.0 51 2.4677424927160467E-4 0.0 0.0 6.482430496032693 0.0 52 2.4677424927160467E-4 0.0 0.0 6.6579692453478945 0.0 53 2.4677424927160467E-4 0.0 0.0 6.818537023540618 0.0 54 2.4677424927160467E-4 0.0 0.0 7.00649674340249 0.0 55 2.4677424927160467E-4 0.0 0.0 7.197993560837256 0.0 56 2.4677424927160467E-4 0.0 0.0 7.375671020312811 0.0 57 2.4677424927160467E-4 0.0 0.0 7.543230735568231 0.0 58 2.4677424927160467E-4 0.0 0.0 7.6918710917128275 0.0 59 2.4677424927160467E-4 0.0 0.0 7.873414681093638 0.0 60 2.4677424927160467E-4 0.0 0.0 8.06129214287242 0.0 61 2.4677424927160467E-4 0.0 0.0 8.25196637947628 0.0 62 2.4677424927160467E-4 0.0 0.0 8.462958362603501 0.0 63 2.4677424927160467E-4 0.0 0.0 8.726019712327032 0.0 64 2.4677424927160467E-4 0.0 0.0 8.961771378464505 0.0 65 2.4677424927160467E-4 0.0 0.0 9.178521427408064 0.0 66 2.4677424927160467E-4 0.0 0.0 9.384577925549854 0.0 67 2.4677424927160467E-4 0.0 0.0 9.598695715834516 0.0 68 2.4677424927160467E-4 0.0 0.0 9.830498993983644 0.0 69 2.4677424927160467E-4 0.0 0.0 10.085005503065759 0.0 70 2.4677424927160467E-4 0.0 0.0 10.284234580311034 0.0 71 2.4677424927160467E-4 0.0 0.0 10.496213660435343 0.0 72 3.290323323621396E-4 0.0 0.0 10.705313707651483 0.0 73 3.290323323621396E-4 0.0 0.0 10.928808919408466 0.0 74 3.290323323621396E-4 0.0 0.0 11.182657363825856 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GCCTTCG 50 0.0 80.0 80 GGTACCG 40 4.1836756E-11 80.0 8 AGCGAAT 20 4.090996E-5 80.0 4 GGCGATA 200 0.0 80.0 8 ATCGACG 25 1.2848504E-6 80.0 1 CGTAAGG 145 0.0 77.24139 2 GACGTAG 115 0.0 76.52174 1 TGATGCG 90 0.0 75.55555 1 CGCATGG 60 0.0 73.33333 2 CTATGCG 55 0.0 72.72727 1 CGTATGG 110 0.0 72.72727 2 TAGCACG 100 0.0 72.0 1 GTTAGCG 45 1.1823431E-10 71.11111 1 CACGAAC 45 1.1823431E-10 71.11111 80 ATGGGAC 1050 0.0 70.85714 5 AAGTGCG 255 0.0 70.58823 1 TAGGGTA 320 0.0 70.0 5 ATGACGG 80 0.0 70.0 2 CGTTTTT 4670 0.0 69.72163 1 TCGATGG 155 0.0 69.677414 2 >>END_MODULE