##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547773_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3906623 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.678029848285846 31.0 31.0 33.0 30.0 34.0 2 32.11769628141748 33.0 31.0 34.0 30.0 34.0 3 32.27582620590725 33.0 31.0 34.0 30.0 34.0 4 35.90561336479102 37.0 35.0 37.0 35.0 37.0 5 35.855677141101154 37.0 35.0 37.0 35.0 37.0 6 35.91925814187855 37.0 35.0 37.0 35.0 37.0 7 36.18129008097275 37.0 35.0 37.0 35.0 37.0 8 36.13088695786617 37.0 35.0 37.0 35.0 37.0 9 37.98740190696671 39.0 39.0 39.0 35.0 39.0 10-11 37.429756851377775 39.0 37.0 39.0 34.5 39.0 12-13 36.92090470465156 39.0 35.0 39.0 33.0 39.0 14-15 38.09024315886125 40.0 36.0 41.0 33.0 41.0 16-17 38.170101645334086 40.0 36.0 41.0 34.0 41.0 18-19 38.0282495905031 40.0 36.0 41.0 33.5 41.0 20-21 37.847654611156486 40.0 35.0 41.0 33.5 41.0 22-23 37.64576976073709 39.5 35.0 41.0 33.0 41.0 24-25 37.56390980138089 39.5 35.0 41.0 33.0 41.0 26-27 37.538728845859964 40.0 35.0 41.0 33.0 41.0 28-29 37.517980107115534 40.0 35.0 41.0 33.0 41.0 30-31 37.355852100394635 40.0 35.0 41.0 33.0 41.0 32-33 37.04078074592813 40.0 35.0 41.0 31.5 41.0 34-35 36.75942034846976 39.0 35.0 41.0 31.0 41.0 36-37 36.56176498218538 39.0 35.0 41.0 30.0 41.0 38-39 36.44450757086108 39.0 35.0 41.0 30.0 41.0 40-41 36.302061012798006 39.0 35.0 41.0 30.0 41.0 42-43 36.237337721095685 39.0 35.0 41.0 30.0 41.0 44-45 36.12115195144246 39.0 35.0 41.0 30.0 41.0 46-47 36.017028517980876 39.0 35.0 41.0 29.0 41.0 48-49 35.906173311322846 38.0 35.0 40.5 29.0 41.0 50-51 35.720089448098776 38.0 35.0 40.0 28.5 41.0 52-53 35.52248054137806 38.0 35.0 40.0 28.0 41.0 54-55 35.330224595513826 37.5 34.5 40.0 27.5 41.0 56-57 35.03593922423536 37.0 34.0 40.0 26.5 41.0 58-59 34.73427561349022 36.5 34.0 40.0 26.0 41.0 60-61 34.37936063961124 36.0 34.0 39.5 25.5 41.0 62-63 33.947620489614685 35.5 33.5 39.0 24.5 41.0 64-65 33.51921608509447 35.0 33.0 39.0 23.0 40.0 66-67 33.150788033552246 35.0 33.0 38.0 22.0 40.0 68-69 32.66438993473392 35.0 32.5 37.5 20.5 40.0 70-71 32.32681807279586 35.0 32.0 37.0 19.5 39.0 72-73 32.01310262085694 35.0 32.0 36.5 19.0 39.0 74-75 31.68953249392122 35.0 32.0 36.0 18.0 38.5 76-77 29.65802510249901 33.0 28.5 34.5 14.0 36.0 78-79 30.743986046260414 34.0 30.5 35.0 15.5 37.0 80-81 30.882756283368014 34.5 31.0 35.0 15.0 36.5 82-83 30.661376718459906 34.0 31.0 35.0 12.5 36.0 84-85 30.426867399285776 34.0 31.0 35.0 11.0 36.0 86 30.01733108108973 34.0 30.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 5.0 9 11.0 10 13.0 11 21.0 12 41.0 13 136.0 14 543.0 15 1682.0 16 4141.0 17 9283.0 18 18738.0 19 30828.0 20 35979.0 21 34240.0 22 30553.0 23 28999.0 24 30593.0 25 35777.0 26 43161.0 27 52725.0 28 64652.0 29 80552.0 30 99540.0 31 120197.0 32 142387.0 33 175538.0 34 358333.0 35 351530.0 36 348908.0 37 581947.0 38 825874.0 39 398340.0 40 1355.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.896391589359915 24.73000338143711 27.446569581963757 14.927035447239215 2 31.04809447955434 26.17879943879919 29.131579883700066 13.64152619794641 3 28.264206707429924 24.98899945042048 33.00374773813598 13.74304610401362 4 26.19477231358132 27.07998698620266 32.51465524060039 14.210585459615633 5 22.729068046750353 30.86038760330854 31.658237818187217 14.752306531753895 6 21.194213006988388 40.06644613519144 27.629233739728658 11.110107118091507 7 86.9153486271903 3.6863295997591785 7.475714958930002 1.922606814120533 8 87.33747791890848 3.03901861019095 7.406806338876313 2.216697132024257 9 81.99636873074265 5.832428673050868 9.331051396564245 2.8401511996422486 10-11 33.99715048009496 29.00251700765597 23.78300900803584 13.21732350421323 12-13 27.296132746876268 25.30135362434512 29.26377846032238 18.138735168456236 14-15 17.499116244388055 30.894675529223065 33.36426371318655 18.241944513202323 16-17 21.630664131143444 26.99541266203573 31.952187349534366 19.42173585728646 18-19 22.589023819293544 28.998114228068587 30.069896685705277 18.34296526693259 20-21 24.862560323839798 28.28526069702656 29.849629718557434 17.002549260576206 22-23 21.171917535938327 25.109819913516095 32.04834456767392 21.66991798287165 24-25 19.463600659700205 27.98582048997305 33.679177642685254 18.871401207641487 26-27 18.716497599077258 32.40174442222861 29.29180778385834 19.589950194835794 28-29 17.094585272241524 28.827237744722233 33.97740196584109 20.100775017195158 30-31 20.968544955579283 28.64018360614782 30.181527626290023 20.20974381198288 32-33 22.44062198988743 28.708029927638268 29.197851955512473 19.653496126961826 34-35 19.090836254227757 28.911146532439915 30.143681640127546 21.854335573204786 36-37 20.802813580936782 30.072622825391647 29.620941155570936 19.50362243810063 38-39 19.37298531237849 30.70501043996311 28.941441239658904 20.980563007999493 40-41 19.952321992677565 28.32930129167826 29.317699711489947 22.400677004154225 42-43 20.32837568406268 27.918537314708892 28.895276047880742 22.857810953347688 44-45 19.453233649625265 30.443070652069576 28.46043756973734 21.64325812856782 46-47 20.32760775739046 29.779671598718384 28.42316752857903 21.469553115312127 48-49 20.430189962020904 27.65270669834279 30.484487497257863 21.432615842378443 50-51 19.13816613479212 29.778007757595244 29.458985420400175 21.62484068721246 52-53 20.857886722112678 27.4814974467718 30.503109719059147 21.15750611205637 54-55 20.62958212246229 27.8143808604004 30.584778720649524 20.971258296487786 56-57 21.287298518439073 26.968253655394953 29.959033671792746 21.78541415437323 58-59 21.37292234239137 28.733742672379698 28.999739672858116 20.893595312370813 60-61 21.842202331783742 30.54813581960686 27.34850534592153 20.26115650268787 62-63 21.511584301838184 28.68764147449088 29.618112625661603 20.18266159800933 64-65 19.190116374167662 31.491840907095465 29.042001237385843 20.27604148135103 66-67 18.167903583222646 30.64338432451762 27.502692222925017 23.686019869334718 68-69 17.969432934787925 32.71704231506342 26.636854899999307 22.67666985014935 70-71 18.810107860420626 30.89746566279879 28.363448431036215 21.92897804574437 72-73 20.455608334871318 31.204815514576147 27.379030431142194 20.960545719410344 74-75 19.92823469272566 32.23543710258195 25.731917310679837 22.104410894012553 76-77 22.544637657639345 30.40679891558515 26.371805009083293 20.676758417692213 78-79 18.391869397175004 30.781662320628328 28.69292736975132 22.13354091244535 80-81 16.990185641153495 30.526531482561793 29.11122982688629 23.37205304939842 82-83 18.562617892742658 29.44685217897913 29.615706455421986 22.374823472856225 84-85 17.174206469372653 29.446685794866816 28.57897985037205 24.800127885388477 86 17.989629406267255 29.205198454010024 29.373579175671672 23.43159296405105 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1852.0 1 2500.5 2 9509.0 3 10183.5 4 4974.0 5 6487.0 6 8310.0 7 9096.0 8 9926.5 9 10806.5 10 10590.0 11 9910.0 12 9546.5 13 9499.0 14 9401.0 15 9654.0 16 9849.0 17 9998.5 18 10321.0 19 11065.5 20 12589.0 21 13483.0 22 15414.5 23 16683.0 24 18973.0 25 24675.5 26 28744.5 27 34649.5 28 44938.5 29 50642.0 30 53441.5 31 61192.5 32 72366.5 33 80162.5 34 87138.0 35 100692.0 36 108844.0 37 112374.0 38 124468.0 39 141117.5 40 161738.0 41 181082.0 42 193384.0 43 198877.0 44 205139.0 45 212267.5 46 213111.0 47 219515.5 48 218116.0 49 196344.0 50 182399.0 51 164101.5 52 134016.0 53 113794.0 54 99264.0 55 88919.5 56 78206.5 57 71742.0 58 64071.0 59 48016.5 60 35504.5 61 27069.0 62 20392.0 63 15351.5 64 12681.0 65 10557.5 66 7317.0 67 5272.0 68 3392.5 69 2446.5 70 1882.5 71 1313.0 72 1069.5 73 637.5 74 325.5 75 187.5 76 142.5 77 113.5 78 79.0 79 43.0 80 34.0 81 26.0 82 20.5 83 12.0 84 6.5 85 5.0 86 7.0 87 4.5 88 2.5 89 3.0 90 2.0 91 1.5 92 1.5 93 1.0 94 0.5 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3906623.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 17.53823442082368 #Duplication Level Percentage of deduplicated Percentage of total 1 77.92163331976889 13.666078716155722 2 9.180303190049157 3.220126188026351 3 2.9449463554901802 1.5494747861801141 4 1.5755899613395703 1.105322643722796 5 0.9726825726350974 0.8529567487962098 6 0.6748350152533732 0.7101248815736271 7 0.5048241989436405 0.6197607599664667 8 0.3863785091129518 0.5421117494393046 9 0.2945999170805523 0.46500861655025505 >10 2.8941877847190307 11.799094332219031 >50 1.0849486259290044 13.866135973680786 >100 1.55326124760264 48.88895025238404 >500 0.0087093602810717 1.031118583153271 >1k 0.002952325519007356 0.9808933634255079 >5k 0.0 0.0 >10k+ 1.476162759503678E-4 0.7028424047264488 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 27148 0.6949224432457393 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 1.0239022296238976E-4 0.0 0.0 0.10180147918035602 0.0 2 1.0239022296238976E-4 0.0 0.0 0.3191759225295095 0.0 3 1.0239022296238976E-4 0.0 0.0 0.4613703446685283 0.0 4 1.0239022296238976E-4 0.0 0.0 0.6799478731374898 0.0 5 1.0239022296238976E-4 0.0 0.0 1.2336741989180937 0.0 6 1.0239022296238976E-4 0.0 0.0 1.6973227260475352 0.0 7 1.0239022296238976E-4 0.0 0.0 1.9987083473373295 0.0 8 1.0239022296238976E-4 0.0 0.0 2.571530449700419 0.0 9 1.0239022296238976E-4 0.0 2.559755574059744E-5 2.7275987470508416 0.0 10 1.0239022296238976E-4 0.0 2.559755574059744E-5 3.013395456894612 0.0 11 1.0239022296238976E-4 0.0 2.559755574059744E-5 3.4706189975331636 0.0 12 1.0239022296238976E-4 0.0 2.559755574059744E-5 3.8207167673973146 0.0 13 1.0239022296238976E-4 0.0 2.559755574059744E-5 3.950675557892328 0.0 14 1.2798777870298722E-4 0.0 2.559755574059744E-5 4.001896266929263 0.0 15 1.2798777870298722E-4 0.0 2.559755574059744E-5 4.087033737322491 0.0 16 1.2798777870298722E-4 0.0 2.559755574059744E-5 4.268648395302029 0.0 17 1.2798777870298722E-4 0.0 2.559755574059744E-5 4.475886206577906 0.0 18 1.2798777870298722E-4 0.0 2.559755574059744E-5 4.711511707170105 0.0 19 1.2798777870298722E-4 0.0 2.559755574059744E-5 4.865250626948134 0.0 20 1.2798777870298722E-4 0.0 2.559755574059744E-5 5.030354861474987 0.0 21 1.2798777870298722E-4 0.0 2.559755574059744E-5 5.259197009795929 0.0 22 1.5358533444358464E-4 0.0 2.559755574059744E-5 5.509208336714344 0.0 23 1.5358533444358464E-4 0.0 2.559755574059744E-5 5.766668552353273 0.0 24 1.5358533444358464E-4 0.0 2.559755574059744E-5 5.956909586617393 0.0 25 1.5358533444358464E-4 0.0 2.559755574059744E-5 6.138063488593601 0.0 26 1.5358533444358464E-4 0.0 2.559755574059744E-5 6.301068723549726 0.0 27 1.5358533444358464E-4 0.0 2.559755574059744E-5 6.463408422056594 0.0 28 1.5358533444358464E-4 0.0 2.559755574059744E-5 6.639263629994499 0.0 29 1.5358533444358464E-4 0.0 2.559755574059744E-5 6.8271752866862245 0.0 30 1.5358533444358464E-4 0.0 2.559755574059744E-5 7.0336451712898835 0.0 31 1.5358533444358464E-4 0.0 2.559755574059744E-5 7.226113192903436 0.0 32 1.5358533444358464E-4 0.0 2.559755574059744E-5 7.403069095738186 0.0 33 1.5358533444358464E-4 0.0 2.559755574059744E-5 7.581688839696075 0.0 34 1.5358533444358464E-4 0.0 2.559755574059744E-5 7.769574898832061 0.0 35 1.5358533444358464E-4 0.0 2.559755574059744E-5 7.976787112552197 0.0 36 1.791828901841821E-4 0.0 2.559755574059744E-5 8.167616890598351 0.0 37 1.791828901841821E-4 0.0 2.559755574059744E-5 8.37022154428518 0.0 38 1.791828901841821E-4 0.0 2.559755574059744E-5 8.575539538880511 0.0 39 1.791828901841821E-4 0.0 2.559755574059744E-5 8.803332187416087 0.0 40 1.791828901841821E-4 0.0 2.559755574059744E-5 9.023445569229485 0.0 41 1.791828901841821E-4 0.0 2.559755574059744E-5 9.246809840621939 0.0 42 1.791828901841821E-4 0.0 2.559755574059744E-5 9.47135159957846 0.0 43 1.791828901841821E-4 0.0 2.559755574059744E-5 9.689801140268719 0.0 44 1.791828901841821E-4 0.0 2.559755574059744E-5 9.904027084261777 0.0 45 1.791828901841821E-4 0.0 2.559755574059744E-5 10.12086397894038 0.0 46 1.791828901841821E-4 0.0 2.559755574059744E-5 10.345815298788748 0.0 47 1.791828901841821E-4 0.0 2.559755574059744E-5 10.57378713021451 0.0 48 1.791828901841821E-4 0.0 2.559755574059744E-5 10.795845926264192 0.0 49 1.791828901841821E-4 0.0 2.559755574059744E-5 11.039585852026162 0.0 50 2.0478044592477952E-4 0.0 2.559755574059744E-5 11.270654987696535 0.0 51 2.0478044592477952E-4 0.0 2.559755574059744E-5 11.51854171748848 0.0 52 2.0478044592477952E-4 0.0 2.559755574059744E-5 11.768169081070786 0.0 53 2.0478044592477952E-4 0.0 2.559755574059744E-5 12.011525043496647 0.0 54 2.0478044592477952E-4 0.0 2.559755574059744E-5 12.255981700819353 0.0 55 2.0478044592477952E-4 0.0 2.559755574059744E-5 12.499568041246878 0.0 56 2.0478044592477952E-4 0.0 2.559755574059744E-5 12.754263720865822 0.0 57 2.0478044592477952E-4 0.0 2.559755574059744E-5 13.00831946159125 0.0 58 2.0478044592477952E-4 0.0 2.559755574059744E-5 13.253313667584509 0.0 59 2.3037800166537698E-4 0.0 2.559755574059744E-5 13.510057151662702 0.0 60 2.3037800166537698E-4 0.0 2.559755574059744E-5 13.76792692819348 0.0 61 2.3037800166537698E-4 0.0 2.559755574059744E-5 14.052290174915777 0.0 62 2.3037800166537698E-4 0.0 2.559755574059744E-5 14.34886345572634 0.0 63 2.3037800166537698E-4 0.0 2.559755574059744E-5 14.64364490763506 0.0 64 2.5597555740597443E-4 0.0 2.559755574059744E-5 14.923963740550342 0.0 65 2.5597555740597443E-4 0.0 2.559755574059744E-5 15.191279015149401 0.0 66 2.5597555740597443E-4 0.0 2.559755574059744E-5 15.455036229500518 0.0 67 2.5597555740597443E-4 0.0 2.559755574059744E-5 15.726882271465662 0.0 68 2.5597555740597443E-4 0.0 2.559755574059744E-5 16.002772727237822 0.0 69 2.5597555740597443E-4 0.0 2.559755574059744E-5 16.322179027768996 0.0 70 2.5597555740597443E-4 0.0 2.559755574059744E-5 16.600450056225032 0.0 71 2.5597555740597443E-4 0.0 2.559755574059744E-5 16.884122168942334 0.0 72 2.5597555740597443E-4 0.0 2.559755574059744E-5 17.17104517123869 0.0 73 2.5597555740597443E-4 0.0 2.559755574059744E-5 17.452797467275445 2.559755574059744E-5 74 2.5597555740597443E-4 0.0 2.559755574059744E-5 17.7687225002259 2.559755574059744E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15070 0.0 72.78036 1 TACGGGA 1400 0.0 68.85714 4 GCGCGAC 105 0.0 68.571434 9 TAGGGTA 3385 0.0 66.292465 5 TGTAGCG 315 0.0 63.492065 1 CTACGGG 780 0.0 63.076923 3 TTGCGGG 2875 0.0 62.886955 3 TAGGGAC 4675 0.0 62.545456 5 TAGCGGG 2435 0.0 61.930183 3 CGGGATC 1505 0.0 61.92691 6 ACGTAGG 575 0.0 61.913044 2 GTAGGGT 3265 0.0 61.868305 4 ATAGGGC 1400 0.0 61.714287 4 TTAGCGG 1155 0.0 61.64502 2 ATAGGGA 6145 0.0 61.643612 4 GGGACCG 1650 0.0 61.090908 7 CGTTAGG 730 0.0 60.82192 2 TTAGGGA 6645 0.0 60.556812 4 ACGGGAT 1895 0.0 60.369392 5 TTACGGG 1650 0.0 60.363636 3 >>END_MODULE