##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547772_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2436699 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.743214898516396 31.0 31.0 33.0 30.0 34.0 2 32.18641941413363 33.0 31.0 34.0 30.0 34.0 3 32.33436423620644 34.0 31.0 34.0 30.0 34.0 4 35.922463545969364 37.0 35.0 37.0 35.0 37.0 5 35.87080144080168 37.0 35.0 37.0 35.0 37.0 6 35.91460003882302 37.0 35.0 37.0 35.0 37.0 7 36.208578080427664 37.0 35.0 37.0 35.0 37.0 8 36.17008214802075 37.0 35.0 37.0 35.0 37.0 9 38.036327014538934 39.0 39.0 39.0 35.0 39.0 10-11 37.475797585175684 39.0 37.0 39.0 34.5 39.0 12-13 36.469675983779695 39.0 35.0 39.0 33.0 39.0 14-15 37.44308940086568 40.0 35.0 41.0 33.0 41.0 16-17 37.67039794410389 40.0 35.0 41.0 33.0 41.0 18-19 37.57156854416569 39.0 35.0 41.0 33.0 41.0 20-21 37.35503933805529 39.0 35.0 41.0 33.0 41.0 22-23 37.166982257554174 39.0 35.0 41.0 33.0 41.0 24-25 37.072571745628 38.5 35.0 41.0 33.0 41.0 26-27 37.05114234462279 39.0 35.0 41.0 33.0 41.0 28-29 37.066356985413464 39.0 35.0 41.0 33.0 41.0 30-31 36.902170518393945 38.0 35.0 41.0 32.5 41.0 32-33 36.59362953733719 38.0 35.0 41.0 31.5 41.0 34-35 36.3228031037071 38.0 35.0 41.0 31.0 41.0 36-37 36.09453260332934 38.0 35.0 41.0 30.0 41.0 38-39 36.03442259384519 38.0 35.0 41.0 30.0 41.0 40-41 35.87370598502318 38.0 35.0 41.0 30.0 41.0 42-43 35.83278135707364 38.0 35.0 41.0 30.0 41.0 44-45 35.72223528634436 38.0 35.0 40.0 29.5 41.0 46-47 35.6281479575442 37.5 35.0 40.0 29.0 41.0 48-49 35.53743158264521 37.0 35.0 40.0 29.0 41.0 50-51 35.35968188931008 37.0 35.0 40.0 29.0 41.0 52-53 35.17446102288383 36.5 34.0 40.0 28.0 41.0 54-55 34.982659942816085 36.0 34.0 40.0 28.0 41.0 56-57 34.66190982144286 36.0 34.0 40.0 26.5 41.0 58-59 34.36209868350584 35.5 34.0 39.0 26.0 41.0 60-61 34.04992245656932 35.0 34.0 39.0 26.0 41.0 62-63 33.63521633160271 35.0 33.0 39.0 24.5 40.0 64-65 33.342681636098675 35.0 33.0 38.0 24.5 40.0 66-67 33.07548613924001 35.0 33.0 37.0 23.0 40.0 68-69 32.69687823567868 35.0 33.0 37.0 22.5 39.5 70-71 32.44754789163537 35.0 32.5 36.0 22.0 39.0 72-73 32.218023851119895 35.0 32.0 36.0 20.5 39.0 74-75 31.937833519856163 35.0 32.0 35.5 20.0 38.0 76-77 29.886046450546417 33.0 29.0 34.5 17.5 36.0 78-79 30.9649474555536 34.0 30.5 35.0 18.5 37.0 80-81 31.283512243407987 35.0 31.5 35.0 19.0 36.0 82-83 31.160491509209795 35.0 31.5 35.0 18.5 36.0 84-85 30.977238879319934 34.0 31.0 35.0 18.0 36.0 86 30.562743695466693 34.0 31.0 35.0 17.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 1.0 9 6.0 10 12.0 11 18.0 12 49.0 13 120.0 14 448.0 15 1262.0 16 3016.0 17 6566.0 18 11842.0 19 17186.0 20 20705.0 21 21453.0 22 19758.0 23 18972.0 24 20353.0 25 22992.0 26 27488.0 27 33279.0 28 40432.0 29 49100.0 30 59651.0 31 72588.0 32 89437.0 33 119088.0 34 305483.0 35 274255.0 36 192245.0 37 329090.0 38 453512.0 39 225248.0 40 1044.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 30.152021238569066 24.921994879137717 30.693122129569556 14.232861752723663 2 28.932995006769403 26.240623072443498 31.55346639039126 13.272915530395835 3 29.193634503071575 23.734650853470207 33.78045462324234 13.291260020215875 4 25.942350696577627 27.51222042607643 31.645517152508372 14.899911724837578 5 24.517143890156316 31.553876781662403 30.081803292076696 13.847176036104583 6 22.849149607727504 39.33834256918889 26.465025019503845 11.347482803579762 7 87.62756499674354 3.825749507838268 6.709897283168746 1.836788212249441 8 88.54983730038055 3.1375643852605517 6.353677659817647 1.9589206545412463 9 83.96671070165006 5.928266068152037 7.66262061912448 2.4424026110734234 10-11 43.03042764001626 27.15632911574224 19.219772323130595 10.593470921110896 12-13 30.4951698999343 27.901004596792628 26.619229539635388 14.984595963637693 14-15 15.196665653000228 32.67668677994286 36.40297796321991 15.723669603836996 16-17 20.091402343908708 25.802797144825853 33.64315822348185 20.462642287783595 18-19 23.731531879809527 27.766252622913214 30.513616987572124 17.988598509705138 20-21 25.940237181531245 27.812647356115793 30.04429352989434 16.202821932458626 22-23 21.180806492718222 25.14426279158813 31.231391320799162 22.443539394894486 24-25 19.090622190102266 26.66529595982105 35.78720638043517 18.456875469641513 26-27 16.639806557970434 34.72574987719041 30.66246590161526 17.971977663223896 28-29 15.452955001828292 29.568342253187613 36.55047258606828 18.428230158915813 30-31 22.439107169166157 29.52826754556061 30.83548686152865 17.197138423744583 32-33 25.709740924094444 29.365075456591068 27.83255133276617 17.09263228654832 34-35 19.61900095169736 29.958029284700327 30.180297197150736 20.24267256645158 36-37 22.770580198867403 29.57774021329676 30.323687907287688 17.327991680548152 38-39 19.51839353157694 31.058821791284032 28.98648950896274 20.43629516817629 40-41 20.035240298452948 27.605420283752736 29.15245173901249 23.206887678781825 42-43 21.302159191594857 26.111924369813423 29.30661522001692 23.2793012185748 44-45 18.426711711212587 32.43088292809247 28.45763879740583 20.684766563289106 46-47 20.69919181646974 30.804748555320128 28.274234938332555 20.221824689877575 48-49 21.34925158995838 26.54203494153361 31.673854669780717 20.434858798727294 50-51 18.591463287012473 31.266992763570716 29.580017884851596 20.561526064565218 52-53 21.687926986468167 26.537438559296817 30.940547026940955 20.834087427294058 54-55 21.90124836920769 27.255315490341648 31.354960132539965 19.488476007910702 56-57 22.000768252459576 24.901413756889955 30.909172614262165 22.1886453763883 58-59 23.6128056850682 27.653559179857666 28.45794659085919 20.27568854421494 60-61 24.334868607078675 29.32963817032797 27.30144346921799 19.034049753375363 62-63 22.383355514981538 26.3038438477629 30.927989054044012 20.384811583211548 64-65 18.8281154135164 30.872627271566984 31.076776409396484 19.222480905520133 66-67 17.988557470578023 29.57166642248386 26.406975174200838 26.03280093273728 68-69 17.40374990920093 32.55465693546885 25.93071610404075 24.11087705128947 70-71 19.04309888090404 29.92111458986112 29.097664504315055 21.938122024919778 72-73 22.484537482881553 30.305548613103216 27.283263135906406 19.92665076810882 74-75 20.946596194277586 32.07874669788923 25.019729560360144 21.954927547473034 76-77 26.138435645929185 28.628833516162643 26.250328826006005 18.982402011902167 78-79 18.358443123258144 30.12388891693229 30.483904659541455 21.033763300268106 80-81 16.32550840296647 29.36179232642193 31.915965000190834 22.39673427042076 82-83 18.417642064120354 27.26639605466248 32.273990345134955 22.041971536082215 84-85 16.553316597577297 27.32779058882529 30.26243701006977 25.856455803527638 86 17.38922205820251 27.654626197162635 31.149272027443686 23.80687971719117 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2636.0 1 2750.0 2 6518.5 3 6584.5 4 3313.5 5 4491.5 6 5697.0 7 6042.0 8 6402.5 9 6420.5 10 5957.5 11 5713.5 12 5898.5 13 6097.0 14 5987.0 15 5905.5 16 5939.0 17 6101.0 18 6539.0 19 7488.0 20 8102.0 21 8158.0 22 8900.0 23 10663.0 24 12540.5 25 15106.0 26 19594.5 27 21517.0 28 23783.5 29 26907.0 30 33194.5 31 42629.5 32 47463.5 33 49393.0 34 53563.0 35 63421.5 36 69353.0 37 68616.0 38 72650.0 39 81545.5 40 93353.0 41 109300.5 42 126629.0 43 135693.0 44 138874.0 45 140973.0 46 137974.0 47 140187.0 48 140589.5 49 118230.5 50 99599.0 51 89121.0 52 74398.5 53 65240.5 54 58677.5 55 56505.5 56 51755.5 57 47528.0 58 43833.5 59 33538.5 60 23378.0 61 17450.0 62 13033.0 63 8958.5 64 6933.0 65 6105.5 66 4698.5 67 3596.0 68 2564.0 69 1874.5 70 1451.0 71 1208.0 72 950.0 73 576.0 74 398.0 75 248.0 76 116.0 77 70.0 78 68.5 79 69.0 80 48.0 81 23.5 82 19.5 83 21.5 84 23.0 85 15.5 86 9.0 87 7.0 88 3.0 89 1.0 90 1.0 91 0.5 92 0.5 93 1.0 94 0.5 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2436699.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.140717676523083 #Duplication Level Percentage of deduplicated Percentage of total 1 79.7915516717336 12.08101356833422 2 9.370493985919149 2.8375200786071857 3 2.833271664302649 1.286932991102973 4 1.2575756208426774 0.7616238972822886 5 0.7294110421792602 0.5521903329887324 6 0.4852918254347185 0.4408599911778958 7 0.3646594727661657 0.3864844287655591 8 0.291198929523535 0.3527168623697269 9 0.2375354321128551 0.3236811224212488 >10 2.0466359469738364 6.701818533673817 >50 0.6816436244045981 7.609164497194021 >100 1.8869525577748818 63.45673104245449 >500 0.020498470717280608 1.8589415873824473 >1k 0.0030064423718678224 0.706175998145262 >5k 0.0 0.0 >10k+ 2.733129428970747E-4 0.6441450681001553 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15566 0.638815052659356 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3704 0.15200892683092987 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 4.103912711418193E-5 0.0 0.0 0.049164874282789955 0.0 2 4.103912711418193E-5 0.0 0.0 0.1760578553198405 0.0 3 4.103912711418193E-5 0.0 0.0 0.26831381307252145 0.0 4 4.103912711418193E-5 0.0 0.0 0.43874930797771905 0.0 5 4.103912711418193E-5 0.0 0.0 0.7586493038327672 0.0 6 4.103912711418193E-5 0.0 0.0 1.03541717709081 0.0 7 4.103912711418193E-5 0.0 0.0 1.1981783552256557 0.0 8 4.103912711418193E-5 0.0 0.0 1.519473681402586 0.0 9 4.103912711418193E-5 0.0 0.0 1.6227691643489819 0.0 10 4.103912711418193E-5 0.0 0.0 1.7949283025929752 0.0 11 4.103912711418193E-5 0.0 0.0 2.1370304662167956 0.0 12 4.103912711418193E-5 0.0 0.0 2.3754677947501928 0.0 13 8.207825422836386E-5 0.0 0.0 2.458572027156411 0.0 14 8.207825422836386E-5 0.0 0.0 2.4980927065673684 0.0 15 8.207825422836386E-5 0.0 0.0 2.5599797102555546 0.0 16 8.207825422836386E-5 0.0 0.0 2.6789931788866825 0.0 17 8.207825422836386E-5 0.0 0.0 2.83137145786164 0.0 18 8.207825422836386E-5 0.0 0.0 3.008947760884705 0.0 19 8.207825422836386E-5 0.0 0.0 3.1284126599140887 0.0 20 8.207825422836386E-5 0.0 0.0 3.2486162632315274 0.0 21 8.207825422836386E-5 0.0 0.0 3.397588294656008 0.0 22 8.207825422836386E-5 0.0 0.0 3.549268908470024 0.0 23 8.207825422836386E-5 0.0 0.0 3.698733409419875 0.0 24 8.207825422836386E-5 0.0 0.0 3.8191011692457706 0.0 25 8.207825422836386E-5 0.0 0.0 3.922109378302367 0.0 26 8.207825422836386E-5 0.0 0.0 4.033489569290257 0.0 27 8.207825422836386E-5 0.0 0.0 4.164158150021812 0.0 28 8.207825422836386E-5 0.0 0.0 4.2830485012715975 0.0 29 8.207825422836386E-5 0.0 0.0 4.440638749390056 0.0 30 8.207825422836386E-5 0.0 0.0 4.596300158534148 0.0 31 8.207825422836386E-5 0.0 0.0 4.739813986052442 0.0 32 8.207825422836386E-5 0.0 0.0 4.875078949020786 0.0 33 8.207825422836386E-5 0.0 0.0 5.011616124929669 0.0 34 8.207825422836386E-5 0.0 0.0 5.168878060031214 0.0 35 8.207825422836386E-5 0.0 0.0 5.339108359300841 0.0 36 8.207825422836386E-5 0.0 0.0 5.479667369666914 0.0 37 8.207825422836386E-5 0.0 0.0 5.6446856997930395 0.0 38 8.207825422836386E-5 0.0 0.0 5.818404324867371 0.0 39 8.207825422836386E-5 0.0 0.0 6.062505052942526 0.0 40 8.207825422836386E-5 0.0 0.0 6.2462372250327185 0.0 41 1.231173813425458E-4 0.0 0.0 6.422459236861016 0.0 42 1.231173813425458E-4 0.0 0.0 6.6016771049686485 0.0 43 1.231173813425458E-4 0.0 0.0 6.791647224380196 0.0 44 1.231173813425458E-4 0.0 0.0 6.9676230014458085 0.0 45 1.231173813425458E-4 0.0 0.0 7.144501639307933 0.0 46 1.231173813425458E-4 0.0 0.0 7.337221380236131 0.0 47 1.231173813425458E-4 0.0 0.0 7.538477259604079 0.0 48 1.231173813425458E-4 0.0 0.0 7.731197000532277 0.0 49 1.231173813425458E-4 0.0 0.0 7.945995791847905 0.0 50 1.231173813425458E-4 0.0 0.0 8.154638714096407 0.0 51 1.231173813425458E-4 0.0 0.0 8.372269205182914 0.0 52 1.231173813425458E-4 0.0 0.0 8.626875949799299 0.0 53 1.231173813425458E-4 0.0 0.0 8.84023837166593 0.0 54 1.231173813425458E-4 0.0 0.0 9.063409144912852 0.0 55 1.231173813425458E-4 0.0 0.0 9.29068383087119 0.0 56 1.231173813425458E-4 0.0 0.0 9.512130960779317 0.0 57 1.231173813425458E-4 0.0 0.0 9.736943299110806 0.0 58 1.231173813425458E-4 0.0 0.0 9.948623116765756 0.0 59 1.231173813425458E-4 0.0 0.0 10.181766397901423 0.0 60 1.231173813425458E-4 0.0 0.0 10.426893104154432 0.0 61 1.6415650845672772E-4 0.0 0.0 10.681992318296187 0.0 62 1.6415650845672772E-4 0.0 0.0 10.982480807026226 0.0 63 2.0519563557090965E-4 0.0 0.0 11.259084523775813 0.0 64 2.0519563557090965E-4 0.0 0.0 11.544675809363405 0.0 65 2.0519563557090965E-4 0.0 0.0 11.79731267587831 0.0 66 2.0519563557090965E-4 0.0 0.0 12.043506399436287 0.0 67 2.0519563557090965E-4 0.0 0.0 12.30673136074665 0.0 68 2.0519563557090965E-4 0.0 0.0 12.611405840442336 0.0 69 2.0519563557090965E-4 0.0 0.0 13.067760933952039 0.0 70 2.0519563557090965E-4 0.0 0.0 13.347688819997874 0.0 71 2.0519563557090965E-4 0.0 0.0 13.627986058187737 0.0 72 2.0519563557090965E-4 0.0 0.0 13.895684284353546 0.0 73 2.0519563557090965E-4 0.0 0.0 14.178772183187172 0.0 74 2.0519563557090965E-4 0.0 0.0 14.492721505610664 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTAGG 405 0.0 73.086426 2 GCGTAAG 110 0.0 72.72727 1 CGTTTTT 7740 0.0 70.80103 1 TACGGGA 1245 0.0 69.0763 4 TGCGTAG 145 0.0 68.965515 1 CGTGCGG 315 0.0 68.57143 2 GGGCGAT 1890 0.0 68.14815 7 ATTCGCG 165 0.0 67.87879 1 GGCGATT 670 0.0 67.462685 8 AATGCGG 345 0.0 67.246376 2 GCGCGAC 125 0.0 67.2 9 TCGTACC 30 3.7968584E-6 66.66667 80 ACGGGAT 1525 0.0 66.36066 5 ACGGATT 85 0.0 65.882355 5 TAACGGG 970 0.0 65.15464 3 TATTGCG 240 0.0 65.00001 1 ACTACGG 80 0.0 65.0 2 CACGGGA 1050 0.0 64.0 4 CGAAACG 290 0.0 63.448273 80 TAGCGCG 145 0.0 63.448273 1 >>END_MODULE