##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547769_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 3278020 Sequences flagged as poor quality 0 Sequence length 86 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.72658434054704 31.0 31.0 33.0 30.0 34.0 2 32.16857645773973 33.0 31.0 34.0 30.0 34.0 3 32.28404250126601 33.0 31.0 34.0 30.0 34.0 4 35.89747530521473 37.0 35.0 37.0 35.0 37.0 5 35.83606414847988 37.0 35.0 37.0 35.0 37.0 6 35.88808305013392 37.0 35.0 37.0 35.0 37.0 7 36.22339613547202 37.0 35.0 37.0 35.0 37.0 8 36.1987986650478 37.0 36.0 37.0 35.0 37.0 9 38.075698439911896 39.0 39.0 39.0 37.0 39.0 10-11 37.42465497464933 39.0 37.0 39.0 34.5 39.0 12-13 36.763755712289736 39.0 35.0 39.0 33.0 39.0 14-15 37.86726026686841 40.0 36.0 41.0 33.0 41.0 16-17 38.01726667317466 40.0 36.0 41.0 33.0 41.0 18-19 37.87726569697561 40.0 36.0 41.0 33.5 41.0 20-21 37.673935637976584 40.0 35.0 41.0 33.0 41.0 22-23 37.490542766670124 39.0 35.0 41.0 33.0 41.0 24-25 37.39812920604511 39.0 35.0 41.0 33.0 41.0 26-27 37.34063169230206 39.0 35.0 41.0 33.0 41.0 28-29 37.30252164416324 39.0 35.0 41.0 33.0 41.0 30-31 37.08005305031696 39.0 35.0 41.0 32.5 41.0 32-33 36.726268601167774 39.0 35.0 41.0 31.5 41.0 34-35 36.396512986497946 39.0 35.0 41.0 30.5 41.0 36-37 36.15400012812613 39.0 35.0 41.0 30.0 41.0 38-39 36.07315894960982 38.0 35.0 41.0 30.0 41.0 40-41 35.914531180407685 38.0 35.0 41.0 29.0 41.0 42-43 35.84977013563065 38.0 35.0 41.0 29.0 41.0 44-45 35.773301108596044 38.0 35.0 41.0 29.0 41.0 46-47 35.650538739849054 38.0 35.0 40.5 28.0 41.0 48-49 35.51352935613572 38.0 35.0 40.0 28.0 41.0 50-51 35.33409527702699 38.0 35.0 40.0 27.5 41.0 52-53 35.14865177759745 37.0 34.5 40.0 27.0 41.0 54-55 34.93879521784491 37.0 34.0 40.0 26.5 41.0 56-57 34.639199120200615 36.0 34.0 40.0 25.5 41.0 58-59 34.31328179815864 36.0 34.0 40.0 25.0 41.0 60-61 33.976594407599706 35.5 33.5 39.0 24.5 41.0 62-63 33.58613187228876 35.0 33.0 39.0 23.0 40.5 64-65 33.201130865583494 35.0 33.0 38.5 22.0 40.0 66-67 32.87119343384116 35.0 33.0 38.0 20.5 40.0 68-69 32.37676386965302 35.0 32.0 37.0 19.0 40.0 70-71 32.01854183317978 35.0 32.0 36.5 18.0 39.0 72-73 31.70144629990055 35.0 32.0 36.0 17.0 39.0 74-75 31.370046705023157 35.0 31.0 36.0 15.0 38.5 76-77 29.3353126277448 32.5 28.0 34.5 11.0 36.0 78-79 30.374673430912566 34.0 30.0 35.0 11.0 37.0 80-81 30.540117815022484 34.0 31.0 35.0 10.5 36.5 82-83 30.329821355574403 34.0 31.0 35.0 10.0 36.0 84-85 30.085718055411498 34.0 30.0 35.0 10.0 36.0 86 29.662005417904712 34.0 29.0 35.0 10.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 5.0 9 10.0 10 12.0 11 24.0 12 51.0 13 161.0 14 602.0 15 1781.0 16 4671.0 17 11170.0 18 22170.0 19 30049.0 20 31925.0 21 30439.0 22 27088.0 23 25897.0 24 28335.0 25 32754.0 26 39466.0 27 47407.0 28 56981.0 29 69803.0 30 85314.0 31 103557.0 32 122282.0 33 153662.0 34 334585.0 35 326090.0 36 279611.0 37 446798.0 38 641603.0 39 322450.0 40 1267.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 28.49314525231695 24.105313573437623 32.55492644950305 14.846614724742373 2 30.76775004423402 25.494292286197158 31.558776334494603 12.17918133507422 3 27.530246917346446 24.604730904631456 34.900580228308556 12.964441949713546 4 25.352346843521396 26.97042727012038 33.64354091799318 14.033684968365048 5 24.60860519459918 30.767261944710526 31.51936229797256 13.104770562717738 6 22.457550594566232 38.81696877993423 28.454158302877957 10.271322322621582 7 87.70876931806396 3.4568428502571678 7.450991757219297 1.3833960744595823 8 88.87788970171017 2.609136002830977 7.010329406165917 1.5026448892929267 9 84.6836504963362 5.14557568288174 8.258948999701039 1.9118248210810183 10-11 38.21631655694596 28.769318063953243 21.54341645261469 11.47094892648611 12-13 26.657799525323213 27.187036686780434 29.945988737103495 16.209175050792858 14-15 15.60260462108224 32.680230749049734 35.74433652021647 15.972828109651557 16-17 20.243226093800526 27.65166167381529 33.26180133129145 18.84331090109273 18-19 22.219891885955544 29.871080713357458 31.107162250382853 16.801865150304145 20-21 23.72186563840367 29.505738220023066 30.977022714931575 15.795373426641692 22-23 20.029499514951098 26.999362419997436 31.928389698659558 21.04274836639191 24-25 18.247585432669723 29.524118217704594 34.73673131951605 17.49156503010964 26-27 17.26206673540735 35.646106491113535 30.041778268588963 17.050048504890146 28-29 16.303561296148285 30.617750959420626 35.15995936571467 17.91872837871642 30-31 20.743406080499813 30.8607177503493 31.134129749055834 17.261746420095054 32-33 22.895574157570728 30.269644480509577 29.555798927401295 17.278982434518397 34-35 19.085896364268677 30.384759702503338 30.523761294928036 20.00558263829995 36-37 21.330391516830282 30.854463975204542 30.698714467880002 17.116430040085174 38-39 18.978453456659814 32.73648421913229 29.428999823063922 18.856062501143985 40-41 19.97644919799147 29.336840531784432 29.743107119541673 20.943603150682424 42-43 19.86825888798726 29.12250382853064 29.66032849097931 21.34890879250279 44-45 18.848130883887222 32.904115899231854 28.322569721966307 19.925183494914613 46-47 20.355595755974644 32.104517361089925 28.309711350144294 19.230175532791137 48-49 20.00128126124917 29.332051055210158 31.162775089840817 19.503892593699856 50-51 18.728577006851697 32.0864729318308 29.143995460674432 20.040954600643072 52-53 20.729754546952122 29.157021616707645 30.57380674919616 19.539417087144066 54-55 21.001839525079163 29.17329668519411 30.855135112049346 18.969728677677377 56-57 21.393356355360858 28.054496311797976 29.88624230480595 20.665905028035215 58-59 22.04190334409186 30.016854686670612 29.11936168784815 18.821880281389376 60-61 22.104715651521346 31.04613455683614 27.574175874460806 19.274973917181715 62-63 21.168220450149786 29.269681087973836 31.201334952196753 18.36076350967962 64-65 18.55366959323006 32.639993044581786 30.257564017303128 18.54877334488502 66-67 17.921367166765304 31.813732069969063 27.073828103550312 23.191072659715317 68-69 17.64879408911477 33.518861995960975 26.87263958121061 21.959704333713645 70-71 18.73611204324562 32.18609099395367 28.859113123165812 20.218683839634902 72-73 20.816483731032758 32.155844076607224 28.208018865046586 18.81965332731344 74-75 20.324601436232847 33.15829372609075 26.13077406483182 20.386330772844584 76-77 23.388432651417624 30.93298698604646 27.290010433127314 18.388569929408607 78-79 18.33562638421974 32.26278363158248 29.639004643046718 19.76258534115106 80-81 16.718644181548616 30.72064844021696 31.139773399796216 21.420933978438203 82-83 17.921138370113667 29.872728049249243 31.046043038175487 21.160090542461607 84-85 17.14435848469503 29.485970189321602 30.106787023874165 23.2628843021092 86 17.322530063880027 29.817908371516953 31.1015796120829 21.75798195252012 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 2445.0 1 2976.0 2 11854.0 3 12317.0 4 5155.0 5 7676.5 6 11478.5 7 13481.0 8 14800.0 9 15892.0 10 15265.5 11 13870.0 12 12233.0 13 11759.0 14 11926.0 15 11612.5 16 11397.0 17 12010.5 18 13139.5 19 13994.0 20 15222.5 21 16210.0 22 16111.0 23 17488.5 24 21368.5 25 23496.0 26 26932.5 27 35079.0 28 42938.0 29 46363.0 30 52238.5 31 64772.0 32 70193.0 33 71090.5 34 81501.5 35 93416.0 36 97054.0 37 97303.0 38 108097.5 39 126060.5 40 138795.5 41 156036.5 42 174425.0 43 180890.0 44 180396.5 45 175371.0 46 174144.5 47 183945.5 48 175639.5 49 145565.5 50 130293.0 51 116175.0 52 93583.5 53 79066.0 54 67775.0 55 58666.5 56 50990.5 57 47176.0 58 41813.0 59 30749.0 60 21760.0 61 16794.0 62 12753.5 63 8142.0 64 5893.0 65 4606.0 66 2729.5 67 1766.0 68 1257.5 69 855.0 70 501.0 71 415.0 72 376.5 73 314.5 74 249.0 75 181.0 76 129.5 77 106.5 78 108.5 79 108.0 80 102.0 81 82.0 82 44.5 83 16.5 84 11.0 85 10.0 86 10.0 87 9.0 88 5.0 89 3.0 90 4.0 91 2.0 92 0.5 93 1.0 94 0.5 95 0.0 96 0.5 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 3278020.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 18.637064979909493 #Duplication Level Percentage of deduplicated Percentage of total 1 77.1608269737052 14.38051346212497 2 9.581508832626563 3.57142405438476 3 3.2965015181887325 1.8431133900256107 4 1.6394854049841854 1.2222078410521395 5 1.0494575080453659 0.9779403885547686 6 0.7655697265192968 0.8560783643875004 7 0.598709782137736 0.7810735179665909 8 0.4514847457973939 0.6731480435891158 9 0.374060885429566 0.6274257325373972 >10 2.9681306846364 11.602252484972649 >50 0.7688806975635437 10.360499142233493 >100 1.3348040223261515 50.31150402895872 >500 0.007934413529834369 0.9333017290098164 >1k 0.0024795042280732404 0.8233819214802894 >5k 0.0 0.0 >10k+ 1.6530028187154936E-4 1.0361358987221376 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 33633 1.0260157046021683 No Hit CGTTTTTTTTCTGTCTCTTATACACATCTGACGCGTCTGGTATCGTATGC 3858 0.1176929976022111 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3291 0.10039597073843357 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0364244269406532 0.0 2 0.0 0.0 0.0 0.17321431839952167 0.0 3 0.0 0.0 0.0 0.2839518977919598 0.0 4 0.0 0.0 0.0 0.4506378850647647 0.0 5 0.0 0.0 0.0 0.8609465470009335 0.0 6 0.0 0.0 0.0 1.2178693235550728 0.0 7 0.0 0.0 0.0 1.4749452413347082 0.0 8 0.0 0.0 0.0 1.9521540442096144 0.0 9 0.0 0.0 0.0 2.1279003788872553 0.0 10 0.0 0.0 0.0 2.4246038767304654 0.0 11 0.0 0.0 0.0 3.02673565139932 0.0 12 0.0 0.0 0.0 3.4439692253250436 0.0 13 0.0 0.0 0.0 3.5939072976980007 0.0 14 0.0 0.0 0.0 3.651838609892557 0.0 15 0.0 0.0 0.0 3.7376831135868605 0.0 16 0.0 0.0 0.0 3.9302993880452224 0.0 17 0.0 0.0 0.0 4.187527836925949 0.0 18 3.0506220218302512E-5 0.0 0.0 4.46464634138901 0.0 19 3.0506220218302512E-5 0.0 0.0 4.669556622595347 0.0 20 3.0506220218302512E-5 0.0 0.0 4.858725694169041 0.0 21 3.0506220218302512E-5 0.0 0.0 5.107595438709953 0.0 22 3.0506220218302512E-5 0.0 0.0 5.3857511546604355 0.0 23 3.0506220218302512E-5 0.0 0.0 5.674309491705359 0.0 24 3.0506220218302512E-5 0.0 0.0 5.879189266691478 0.0 25 3.0506220218302512E-5 0.0 0.0 6.062958737286532 0.0 26 3.0506220218302512E-5 0.0 0.0 6.233305470985534 0.0 27 3.0506220218302512E-5 0.0 0.0 6.420979737768531 0.0 28 3.0506220218302512E-5 0.0 0.0 6.617744858176582 0.0 29 3.0506220218302512E-5 0.0 0.0 6.839159004521022 0.0 30 6.1012440436605025E-5 0.0 0.0 7.074758543266972 0.0 31 6.1012440436605025E-5 0.0 0.0 7.307002397788909 0.0 32 6.1012440436605025E-5 0.0 0.0 7.50843496989036 0.0 33 6.1012440436605025E-5 0.0 0.0 7.717555109486824 0.0 34 6.1012440436605025E-5 0.0 0.0 7.9267362615237245 0.0 35 6.1012440436605025E-5 0.0 0.0 8.16117656390138 0.0 36 6.1012440436605025E-5 0.0 0.0 8.380211225068791 0.0 37 6.1012440436605025E-5 0.0 0.0 8.6212408710136 0.0 38 9.151866065490753E-5 0.0 0.0 8.877981220370833 0.0 39 9.151866065490753E-5 0.0 0.0 9.21626469637159 0.0 40 9.151866065490753E-5 0.0 0.0 9.469801892605902 0.0 41 9.151866065490753E-5 0.0 0.0 9.730752100353262 0.0 42 9.151866065490753E-5 0.0 0.0 9.996003685151402 0.0 43 9.151866065490753E-5 0.0 0.0 10.241792301450266 0.0 44 9.151866065490753E-5 0.0 0.0 10.482089798109834 0.0 45 9.151866065490753E-5 0.0 0.0 10.731325617293367 0.0 46 9.151866065490753E-5 0.0 0.0 10.990750514029811 0.0 47 9.151866065490753E-5 0.0 0.0 11.261706762008773 0.0 48 9.151866065490753E-5 0.0 0.0 11.53458490186149 0.0 49 9.151866065490753E-5 0.0 0.0 11.824363487715145 0.0 50 9.151866065490753E-5 0.0 0.0 12.11578940946059 0.0 51 9.151866065490753E-5 0.0 0.0 12.40440875894595 0.0 52 9.151866065490753E-5 0.0 0.0 12.732289613852265 0.0 53 9.151866065490753E-5 0.0 0.0 13.011055454207114 0.0 54 9.151866065490753E-5 0.0 0.0 13.311023117613681 0.0 55 9.151866065490753E-5 0.0 0.0 13.602479545579344 0.0 56 9.151866065490753E-5 0.0 0.0 13.902233665444385 0.0 57 9.151866065490753E-5 0.0 0.0 14.203604614980994 0.0 58 9.151866065490753E-5 0.0 0.0 14.486092214202476 0.0 59 9.151866065490753E-5 0.0 0.0 14.791001885284409 0.0 60 9.151866065490753E-5 0.0 0.0 15.122085893313647 0.0 61 1.2202488087321005E-4 0.0 0.0 15.452590283158736 0.0 62 1.2202488087321005E-4 0.0 0.0 15.805455732423841 0.0 63 1.2202488087321005E-4 0.0 0.0 16.14712539886883 0.0 64 1.2202488087321005E-4 0.0 0.0 16.481534584901862 0.0 65 1.2202488087321005E-4 0.0 0.0 16.793430180413786 0.0 66 1.2202488087321005E-4 0.0 0.0 17.09833985149572 0.0 67 1.2202488087321005E-4 0.0 0.0 17.403188510137216 0.0 68 1.2202488087321005E-4 0.0 0.0 17.76026381779245 0.0 69 1.2202488087321005E-4 0.0 0.0 18.21257954496922 0.0 70 1.2202488087321005E-4 0.0 0.0 18.572735980866497 0.0 71 1.5253110109151257E-4 0.0 0.0 18.904338594639448 0.0 72 1.8303732130981506E-4 0.0 0.0 19.24359826968719 0.0 73 1.8303732130981506E-4 0.0 0.0 19.586335653839818 0.0 74 1.8303732130981506E-4 0.0 0.0 19.94231273756719 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGTTTTT 15005 0.0 73.442184 1 GGCGCGA 215 0.0 72.55814 8 GCGCGAG 155 0.0 69.677414 1 CGTAAGG 520 0.0 67.69231 2 CGGGACC 805 0.0 65.59006 6 TAGGGAC 3185 0.0 65.5573 5 GCGGGAT 2430 0.0 65.18518 5 GCGCGAC 240 0.0 65.0 9 GGGCGCG 260 0.0 64.61539 7 AGGGATT 6255 0.0 64.33253 6 TCGAGCG 100 0.0 64.0 1 TACGGGA 1185 0.0 63.797466 4 ACGGGAT 1455 0.0 63.505154 5 TTAGGGA 4945 0.0 63.01315 4 CGAGGGA 2345 0.0 62.430702 4 GCGGGGT 2340 0.0 62.39316 5 CGGGATC 975 0.0 62.358974 6 CGGGATT 1585 0.0 62.08202 6 AGGGACC 3085 0.0 61.84765 6 TATTGCG 505 0.0 61.782177 1 >>END_MODULE