##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547767_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2632197 Sequences flagged as poor quality 0 Sequence length 86 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80195479289734 31.0 31.0 33.0 30.0 34.0 2 32.24239941007455 33.0 31.0 34.0 31.0 34.0 3 32.39386261742567 34.0 31.0 34.0 31.0 34.0 4 35.979223819493754 37.0 35.0 37.0 35.0 37.0 5 35.92429555994479 37.0 35.0 37.0 35.0 37.0 6 35.9905288244003 37.0 35.0 37.0 35.0 37.0 7 36.25838605545102 37.0 35.0 37.0 35.0 37.0 8 36.213869630578564 37.0 36.0 37.0 35.0 37.0 9 38.092475981091084 39.0 39.0 39.0 37.0 39.0 10-11 37.53124196251268 39.0 37.5 39.0 35.0 39.0 12-13 36.86056058874013 39.0 35.0 39.0 33.0 39.0 14-15 37.91667341008291 40.0 36.0 41.0 33.0 41.0 16-17 38.100923677065204 40.0 36.0 41.0 33.5 41.0 18-19 37.97781700989705 40.0 36.0 41.0 34.0 41.0 20-21 37.80189514690579 40.0 35.0 41.0 33.5 41.0 22-23 37.637495597783904 39.5 35.0 41.0 33.0 41.0 24-25 37.55879024252364 39.0 35.0 41.0 33.0 41.0 26-27 37.54215205016949 39.5 35.0 41.0 33.0 41.0 28-29 37.50895639650072 40.0 35.0 41.0 33.0 41.0 30-31 37.34595852818007 39.5 35.0 41.0 33.0 41.0 32-33 37.06023219386695 39.0 35.0 41.0 32.0 41.0 34-35 36.81406976757439 39.0 35.0 41.0 31.0 41.0 36-37 36.64164536317001 39.0 35.0 41.0 31.0 41.0 38-39 36.53593481035044 39.0 35.0 41.0 31.0 41.0 40-41 36.38820403640001 39.0 35.0 41.0 30.0 41.0 42-43 36.359516024066586 39.0 35.0 41.0 30.0 41.0 44-45 36.2515581090625 39.0 35.0 41.0 30.0 41.0 46-47 36.18045704785774 38.0 35.0 41.0 30.0 41.0 48-49 36.076939909892765 38.0 35.0 40.5 30.0 41.0 50-51 35.90321184166687 38.0 35.0 40.0 30.0 41.0 52-53 35.71037502132249 38.0 35.0 40.0 29.0 41.0 54-55 35.51584550852387 37.0 35.0 40.0 29.0 41.0 56-57 35.21627218631433 37.0 34.5 40.0 28.0 41.0 58-59 34.92003733003267 36.5 34.0 40.0 27.0 41.0 60-61 34.629931004404305 36.0 34.0 39.5 26.5 41.0 62-63 34.312245625992276 35.5 34.0 39.0 26.0 41.0 64-65 34.010131650480574 35.0 33.5 39.0 26.0 40.0 66-67 33.74029185505492 35.0 34.0 38.5 26.0 40.0 68-69 33.30599476406971 35.0 33.0 37.5 24.5 40.0 70-71 33.051799504368404 35.0 33.0 37.0 24.5 39.5 72-73 32.75014484098264 35.0 33.0 36.5 24.0 39.0 74-75 32.438032563672095 35.0 33.0 36.0 23.5 39.0 76-77 30.35748768044337 33.0 29.5 34.5 19.5 36.0 78-79 31.512305879841062 34.0 31.5 35.0 20.0 37.0 80-81 31.694237171457914 35.0 32.0 35.0 20.0 37.0 82-83 31.52061585815955 35.0 32.0 35.0 20.0 36.0 84-85 31.302245614594955 35.0 32.0 35.0 19.5 36.0 86 30.87791339326046 34.0 31.0 35.0 18.0 36.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 2.0 8 2.0 9 6.0 10 15.0 11 13.0 12 41.0 13 115.0 14 381.0 15 1044.0 16 2606.0 17 5658.0 18 11138.0 19 16675.0 20 19591.0 21 20472.0 22 18372.0 23 17356.0 24 18238.0 25 20749.0 26 24754.0 27 29889.0 28 37232.0 29 46174.0 30 57321.0 31 71563.0 32 89205.0 33 120419.0 34 272903.0 35 253831.0 36 232133.0 37 397771.0 38 551614.0 39 293783.0 40 1131.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.864256360751114 23.518376474101295 30.547371644295623 14.069995520851972 2 30.51443338017633 24.9713072387819 31.296327744465934 13.217931636575834 3 29.74245468709219 25.396883287990985 32.38716555029886 12.473496474617972 4 26.563399320035696 26.25551962866001 32.17988623191957 15.00119481938472 5 24.371428126390235 31.787134473597533 30.264832001556112 13.576605398456119 6 23.447029230714875 40.3775629255713 25.76942379312794 10.40598405058588 7 88.73237831362925 3.2655990414091347 6.418060654274738 1.5839619906868674 8 89.26543112084696 2.7268475725791044 6.4084869027660165 1.5992344038079216 9 84.98691397338422 5.3725082127211605 7.3090653929018226 2.3315124209928055 10-11 38.03546998951826 29.88083718657836 20.23583341216482 11.84785941173856 12-13 28.82856032432223 24.463119591732685 29.201917637623627 17.506402446321456 14-15 16.388192069210625 31.18396913300942 35.246829929522754 17.1810088682572 16-17 22.85545116873851 27.243610565622557 31.566102385193812 18.33483588044512 18-19 23.414717819372942 28.12319898548627 30.312510803712637 18.149572391428148 20-21 25.332013523303914 27.748379015704373 30.985845664287286 15.933761796704427 22-23 21.26218136408483 23.764330709289617 33.76120784272606 21.212280083899497 24-25 19.002453083868723 27.740628835911597 34.89793887007697 18.358979210142707 26-27 18.44438315217288 33.034628487153505 29.813668961707652 18.707319398965957 28-29 16.87985359758407 29.05428431078677 35.00494073961789 19.060921352011267 30-31 21.94125287734923 27.66485563200627 31.965236644521667 18.42865484612284 32-33 24.20848439535491 27.559411396639383 30.270074770239464 17.962029437766247 34-35 19.50378334144443 28.27328273681643 31.508887822605985 20.714046099133157 36-37 22.092894262853427 28.24893045619306 31.232445747791676 18.425729533161842 38-39 19.720788375642094 30.476195360757576 29.638055206354235 20.164961057246096 40-41 20.640818297414672 26.839005591146865 30.45492035740486 22.065255754033608 42-43 20.837137189959563 26.28667231214077 30.666910569383678 22.209279928515986 44-45 19.367547337832235 29.714626222885293 29.818094922226567 21.099731517055904 46-47 20.54629649680476 28.794710274344972 30.27592539616146 20.383067832688813 48-49 21.140154023426057 26.8398223993113 31.80234990010246 20.21767367716018 50-51 19.190091015224166 29.310629105648246 30.764908553577108 20.734371325550484 52-53 21.440017597467058 26.284905727040947 31.166588215091807 21.108488460400192 54-55 21.61380778110453 26.896467095737897 31.126184704260357 20.36354041889722 56-57 21.727591057964126 26.45786010697528 30.292299550527563 21.522249284533036 58-59 22.90531445784643 26.779701519301174 30.174660179310287 20.140323843542106 60-61 22.803669330221105 28.310494997144968 28.88894714187426 19.996888530759666 62-63 22.49168660248454 25.780327232346213 31.60257381951275 20.1254123456565 64-65 19.842378818910593 28.94222962794958 31.466679735597296 19.74871181754253 66-67 19.052069430973443 28.344288060506113 28.753432968732962 23.850209539787485 68-69 18.319962373636926 30.068703064398296 28.644189625624527 22.96714493634025 70-71 19.1808971744896 28.75552247799082 30.839238096540644 21.224342250978935 72-73 21.573879158740777 28.595580042071315 29.563231779384292 20.26730901980361 74-75 20.32581527902357 30.238200256287804 27.717473274226816 21.718511190461808 76-77 23.440000881392997 27.75996629431612 28.562128898406918 20.23790392588397 78-79 19.097050866633463 28.630816766374252 31.223479853521603 21.048652513470685 80-81 17.475040811914912 28.012986869903735 32.037362704995104 22.474609613186246 82-83 18.638213629147057 27.39696154961046 32.132473367304954 21.83235145393753 84-85 17.701391651156808 27.111135678674508 31.382263561579926 23.805209108588755 86 17.901927553294833 27.404521774016153 31.974582449565897 22.718968223123117 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 1974.0 1 2543.5 2 7934.0 3 7968.0 4 3512.0 5 4442.5 6 5295.0 7 5548.0 8 5935.0 9 6173.5 10 6184.5 11 6369.0 12 6380.0 13 6369.5 14 6373.0 15 6258.5 16 6268.0 17 6801.5 18 7440.5 19 7931.5 20 8151.0 21 8109.0 22 8616.0 23 10039.0 24 13024.5 25 17153.0 26 20648.5 27 25703.0 28 32294.5 29 35268.0 30 41439.5 31 48685.0 32 52111.0 33 59995.0 34 65334.5 35 69400.0 36 73658.0 37 77152.0 38 82035.5 39 91284.0 40 104870.0 41 118128.0 42 128591.5 43 131524.0 44 131432.5 45 129458.5 46 132684.5 47 140330.5 48 141641.5 49 127681.5 50 114948.0 51 104460.0 52 89396.0 53 80677.0 54 70298.0 55 61784.5 56 55014.5 57 50522.0 58 46605.5 59 37091.0 60 26927.0 61 20849.5 62 16213.0 63 10891.5 64 8695.0 65 7696.5 66 5915.5 67 4165.5 68 3185.5 69 2658.0 70 1685.5 71 1228.0 72 1127.5 73 962.0 74 711.5 75 351.5 76 170.5 77 198.0 78 179.0 79 126.0 80 108.5 81 70.0 82 39.0 83 24.5 84 16.0 85 16.5 86 21.0 87 13.5 88 6.5 89 4.5 90 2.0 91 1.0 92 1.0 93 2.0 94 1.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2632197.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.121932283902474 #Duplication Level Percentage of deduplicated Percentage of total 1 78.71717541464317 12.690729716149496 2 9.13234857944148 2.9446221078149692 3 2.9178337503665874 1.4112335441728596 4 1.4574484765388713 0.9398754258414601 5 0.841606866176067 0.678416445307896 6 0.5491205468727176 0.5311730563428868 7 0.4317392125092831 0.4872329243866029 8 0.32181887474539855 0.41506736850616055 9 0.24441203318696686 0.3546354823570083 >10 2.4679260926612723 9.181816056575926 >50 1.0748045831572157 12.778188281848779 >100 1.8345063813027147 55.60072005790704 >500 0.006410207352649437 0.6666513429796217 >1k 0.002611565958486808 0.6274950977095894 >5k 0.0 0.0 >10k+ 2.3741508713516433E-4 0.6921430920997015 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18083 0.6869926529055387 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.038295006034882645 0.0 2 0.0 0.0 0.0 0.14588573727574342 0.0 3 0.0 0.0 0.0 0.2082290953146744 0.0 4 0.0 0.0 0.0 0.30240897622784313 0.0 5 0.0 0.0 0.0 0.5329768250628657 0.0 6 0.0 0.0 0.0 0.6925773412856256 0.0 7 0.0 0.0 0.0 0.7987624026621107 0.0 8 0.0 0.0 0.0 1.009498909086212 0.0 9 0.0 0.0 0.0 1.0858229836140685 0.0 10 0.0 0.0 0.0 1.2484247949526575 0.0 11 0.0 0.0 0.0 1.567131943391775 0.0 12 0.0 0.0 0.0 1.810312829928763 0.0 13 0.0 0.0 0.0 1.9011874871067782 0.0 14 0.0 0.0 0.0 1.9386846805159341 0.0 15 0.0 0.0 0.0 1.9992804489937492 0.0 16 0.0 0.0 0.0 2.123625245374871 0.0 17 0.0 0.0 0.0 2.2935973257320788 0.0 18 0.0 0.0 0.0 2.476372399178329 0.0 19 0.0 0.0 0.0 2.6197507253446455 0.0 20 0.0 0.0 0.0 2.777223741232134 0.0 21 0.0 0.0 0.0 2.9591630109752423 0.0 22 0.0 0.0 0.0 3.159034069258494 0.0 23 0.0 0.0 0.0 3.3495973135749337 0.0 24 0.0 0.0 0.0 3.492139836038108 0.0 25 0.0 0.0 0.0 3.6266662411665997 0.0 26 0.0 0.0 0.0 3.7500992516897482 0.0 27 0.0 0.0 0.0 3.8967448105138027 0.0 28 0.0 0.0 0.0 4.040693002841353 0.0 29 0.0 0.0 0.0 4.227267184029159 0.0 30 0.0 0.0 0.0 4.444994048697723 0.0 31 0.0 0.0 0.0 4.626363452279597 0.0 32 0.0 0.0 0.0 4.7801133425803615 0.0 33 3.799107741555818E-5 0.0 0.0 4.946096359808935 0.0 34 3.799107741555818E-5 0.0 0.0 5.122033039320385 0.0 35 3.799107741555818E-5 0.0 0.0 5.327146866286983 0.0 36 3.799107741555818E-5 0.0 0.0 5.5008800633083315 0.0 37 3.799107741555818E-5 0.0 0.0 5.68794812850254 0.0 38 3.799107741555818E-5 0.0 0.0 5.89997633155877 0.0 39 3.799107741555818E-5 0.0 0.0 6.245923082504843 0.0 40 3.799107741555818E-5 0.0 0.0 6.460002803741514 0.0 41 3.799107741555818E-5 0.0 0.0 6.673284712352457 0.0 42 3.799107741555818E-5 0.0 0.0 6.89264519334989 0.0 43 3.799107741555818E-5 0.0 0.0 7.101368172670966 0.0 44 3.799107741555818E-5 0.0 0.0 7.297136194593338 0.0 45 3.799107741555818E-5 0.0 0.0 7.5027818966437545 0.0 46 7.598215483111636E-5 0.0 0.0 7.731678138072493 0.0 47 7.598215483111636E-5 0.0 0.0 7.973757283364429 0.0 48 7.598215483111636E-5 0.0 0.0 8.19604307732286 0.0 49 7.598215483111636E-5 0.0 0.0 8.416429317410513 0.0 50 7.598215483111636E-5 0.0 0.0 8.654177479877076 0.0 51 7.598215483111636E-5 0.0 0.0 8.882959748073567 0.0 52 7.598215483111636E-5 0.0 0.0 9.1714259988899 0.0 53 7.598215483111636E-5 0.0 0.0 9.41673438576216 0.0 54 7.598215483111636E-5 0.0 0.0 9.66246067448599 0.0 55 7.598215483111636E-5 0.0 0.0 9.905945489642303 0.0 56 7.598215483111636E-5 0.0 0.0 10.152241644527367 0.0 57 7.598215483111636E-5 0.0 0.0 10.401881014225 0.0 58 7.598215483111636E-5 0.0 0.0 10.654673643348124 0.0 59 7.598215483111636E-5 0.0 0.0 10.903059307491043 0.0 60 7.598215483111636E-5 0.0 0.0 11.197338193151957 0.0 61 7.598215483111636E-5 0.0 0.0 11.487779979993899 0.0 62 7.598215483111636E-5 0.0 0.0 11.81176788819378 0.0 63 7.598215483111636E-5 0.0 0.0 12.120445392195188 0.0 64 7.598215483111636E-5 0.0 0.0 12.408303785772873 0.0 65 7.598215483111636E-5 0.0 0.0 12.691983160834846 0.0 66 7.598215483111636E-5 0.0 0.0 12.957578783047014 0.0 67 7.598215483111636E-5 0.0 0.0 13.245057265850543 0.0 68 7.598215483111636E-5 0.0 0.0 13.577099282462521 0.0 69 7.598215483111636E-5 0.0 0.0 14.051417883995764 0.0 70 7.598215483111636E-5 0.0 0.0 14.362412843719524 0.0 71 7.598215483111636E-5 0.0 0.0 14.65350047887753 0.0 72 1.1397323224667454E-4 0.0 0.0 14.974563074116412 0.0 73 1.1397323224667454E-4 0.0 0.0 15.279479461453683 0.0 74 1.1397323224667454E-4 0.0 0.0 15.610305763588364 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGGGA 1200 0.0 68.333336 4 CGAGGGA 1615 0.0 67.36842 4 CTACGGG 465 0.0 67.09677 3 TAGGGAC 2965 0.0 66.913994 5 CGAACGG 120 0.0 66.66667 2 CGTTTTT 8425 0.0 66.65875 1 CGAAACG 380 0.0 66.31579 80 AGGGATT 5730 0.0 65.2007 6 ACGGGAT 1290 0.0 64.18604 5 TATTGCG 325 0.0 64.0 1 TATAGCG 125 0.0 64.0 1 TTAGGGA 4465 0.0 63.964165 4 CGGGATA 650 0.0 63.384617 6 TACGCGG 260 0.0 63.07692 2 ATTGCGG 650 0.0 62.76923 2 TCGATAG 255 0.0 62.7451 1 TTGCGGG 2175 0.0 62.344826 3 ATAGGGA 3795 0.0 62.29249 4 CGTAAGG 560 0.0 62.142857 2 ACGGGAC 895 0.0 61.22905 5 >>END_MODULE