##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547766_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1698558 Sequences flagged as poor quality 0 Sequence length 86 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.75556324835537 31.0 31.0 33.0 30.0 34.0 2 32.19415115645153 33.0 31.0 34.0 30.0 34.0 3 32.34636615293679 34.0 31.0 34.0 30.0 34.0 4 35.944803768843926 37.0 35.0 37.0 35.0 37.0 5 35.880273149341974 37.0 35.0 37.0 35.0 37.0 6 35.94214504303062 37.0 35.0 37.0 35.0 37.0 7 36.22712500838947 37.0 35.0 37.0 35.0 37.0 8 36.190547511477384 37.0 35.0 37.0 35.0 37.0 9 38.077345607273934 39.0 39.0 39.0 37.0 39.0 10-11 37.48712672749474 39.0 37.5 39.0 35.0 39.0 12-13 36.45612690293767 39.0 35.0 39.0 33.0 39.0 14-15 37.46455051873413 40.0 35.0 41.0 33.0 41.0 16-17 37.71158977203016 40.0 35.0 41.0 33.0 41.0 18-19 37.633635118730126 39.0 35.5 41.0 33.5 41.0 20-21 37.41737344264959 39.0 35.0 41.0 33.0 41.0 22-23 37.18937269142414 39.0 35.0 41.0 33.0 41.0 24-25 37.11521155003244 39.0 35.0 41.0 33.0 41.0 26-27 37.091674526274645 39.0 35.0 41.0 33.0 41.0 28-29 37.11418597422049 39.0 35.0 41.0 33.0 41.0 30-31 36.965543125404025 38.0 35.0 41.0 32.5 41.0 32-33 36.62318007392153 38.0 35.0 41.0 31.5 41.0 34-35 36.36998324461102 38.0 35.0 41.0 31.0 41.0 36-37 36.164009412690056 38.0 35.0 41.0 30.5 41.0 38-39 36.08343636190227 38.0 35.0 41.0 30.0 41.0 40-41 35.9229673052083 38.0 35.0 40.5 30.0 41.0 42-43 35.90411219399043 38.0 35.0 40.0 30.0 41.0 44-45 35.786621357645714 38.0 35.0 40.0 30.0 41.0 46-47 35.70250530155579 37.5 35.0 40.0 30.0 41.0 48-49 35.58792693567132 37.0 35.0 40.0 29.0 41.0 50-51 35.40999218160346 37.0 35.0 40.0 29.0 41.0 52-53 35.22452515604412 36.0 34.0 40.0 28.5 41.0 54-55 35.02018918400196 36.0 34.0 40.0 28.0 41.0 56-57 34.70163279676055 36.0 34.0 39.5 27.5 41.0 58-59 34.399768509523966 35.0 34.0 39.0 26.0 41.0 60-61 34.089424382329014 35.0 34.0 39.0 26.0 41.0 62-63 33.669916187731005 35.0 33.0 38.5 25.5 40.0 64-65 33.38487823200621 35.0 33.0 38.0 25.0 40.0 66-67 33.12949955197291 35.0 33.0 37.0 24.5 40.0 68-69 32.812286068535784 35.0 33.0 36.5 23.5 39.5 70-71 32.57719018131851 35.0 33.0 36.0 24.0 39.0 72-73 32.33249409204749 35.0 32.5 36.0 23.0 39.0 74-75 32.04261055554181 35.0 32.0 35.0 22.0 37.5 76-77 29.97264002759988 32.5 29.0 34.5 18.5 35.5 78-79 31.055852081589208 34.0 30.5 35.0 20.0 36.0 80-81 31.426446727165043 34.5 32.0 35.0 20.0 36.0 82-83 31.30300643251511 34.5 32.0 35.0 19.5 36.0 84-85 31.134169101084566 34.0 32.0 35.0 19.0 36.0 86 30.759067397168657 34.0 31.0 35.0 18.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 2.0 9 4.0 10 15.0 11 12.0 12 19.0 13 71.0 14 253.0 15 746.0 16 1750.0 17 3591.0 18 6989.0 19 11070.0 20 13838.0 21 14245.0 22 13122.0 23 12690.0 24 13415.0 25 15182.0 26 17847.0 27 21783.0 28 26674.0 29 33273.0 30 41036.0 31 50717.0 32 62850.0 33 83883.0 34 220445.0 35 195100.0 36 143379.0 37 242810.0 38 307210.0 39 144072.0 40 464.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 31.306555325164048 23.1539929752178 31.10179340358116 14.437658296036993 2 29.051230514353943 25.210443211241536 32.3777580747905 13.360568199614026 3 28.150172087146863 24.317568196081616 33.458969313971025 14.073290402800492 4 26.75069088014657 27.392647174838892 31.302846296682247 14.553815648332291 5 24.238206761264554 32.26195396330299 29.85856238056045 13.641276894872004 6 22.573912695356885 40.643121989358036 26.16442888614931 10.618536429135773 7 88.91966008814536 3.5370002084120764 5.900357832938292 1.642981870504275 8 89.96360442210393 2.6165135367764893 5.668278622219553 1.7516034189000316 9 86.05163909622162 4.859180551974086 6.785049436051051 2.304130915753245 10-11 43.61275858698967 26.969523560573144 18.87518707044446 10.542530781992726 12-13 30.908541244985454 26.6894330367288 27.09972223497814 15.302303483307606 14-15 15.010526576072175 33.18208739413079 35.81767593452799 15.989710095269047 16-17 19.479905896648805 24.21044792111897 34.33630173358814 21.973344448644085 18-19 24.00456740364474 26.207347644295925 31.12551941117112 18.662565540888213 20-21 26.830582176175323 26.702944497626813 29.05517503670761 17.41129828949026 22-23 20.566180254074336 23.77042762154722 30.824587679667104 24.838804444711336 24-25 17.877723339444398 26.32094400073474 36.76765821361413 19.033674446206724 26-27 17.46290088416174 34.852739794578696 28.4886062177447 19.195753103514864 28-29 15.406862762413764 27.46144082215621 37.587824495837054 19.543871919592974 30-31 23.08758370335308 28.45416523898507 30.306972149317247 18.151278908344608 32-33 26.341726334926452 27.609389847152705 28.4060950523915 17.64278876552935 34-35 19.238789608597408 28.410687182892786 30.025674719379612 22.324848489130193 36-37 24.12584674765301 27.869581138824817 30.253573913872827 17.750998199649352 38-39 19.09092889380286 30.398314334865223 29.54108720455822 20.9696695667737 40-41 20.36957230780462 25.397130978159122 29.645381553058535 24.587915160977726 42-43 21.717244862995553 24.51093810161325 28.745471158476775 25.02634587691442 44-45 18.825821667555655 32.01762907124749 28.525107767883114 20.63144149331374 46-47 22.155057407518612 29.617063414967284 27.229008370629675 20.99887080688443 48-49 21.724574609757216 25.77751245468215 32.362186042513706 20.135726893046925 50-51 19.665533941143014 31.15698727979851 29.08885066038369 20.08862811867478 52-53 23.27238751929578 25.71275163992045 30.07109559991475 20.94376524086902 54-55 23.06918574461396 26.67739341252992 30.257400689290563 19.996020153565556 56-57 23.410416364940144 24.02867608877648 30.1107468805893 22.450160665694078 58-59 24.23087701450289 25.453767254341624 29.23217811814492 21.083177613010566 60-61 24.427249466900747 28.16527313167993 26.95262687526714 20.454850526152182 62-63 23.756209679033628 24.893792263790814 31.76288357536216 19.587114481813398 64-65 20.175966908401126 29.70340135573822 30.543143066059564 19.57748866980109 66-67 18.020726993131824 28.824567662688 26.003351077796577 27.151354266383603 68-69 18.088814158833554 31.869267931975244 24.727033165779446 25.314884743411763 70-71 19.142060500730622 29.671020948357373 28.9545897166891 22.232328834222912 72-73 23.78626458442985 28.12912482234931 28.03095331451737 20.053657278703465 74-75 23.211011928942078 31.01445461385481 23.757416585126915 22.017116872076194 76-77 27.934371390320496 27.386877574978307 25.67000950217773 19.00874153252347 78-79 19.853281430483975 28.170306813190955 31.23811491865453 20.738296837670543 80-81 16.54441591043697 27.94543960229795 32.311437113127724 23.198707374137356 82-83 19.66709408804409 25.157251032934997 33.109702465267596 22.065952413753312 84-85 16.442505937389242 25.983893396634084 31.310382100581784 26.26321856539488 86 19.114095603447158 24.99802773882317 32.198959352580246 23.688917305149428 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1543.0 1 1521.0 2 3853.0 3 4005.0 4 1916.0 5 2351.0 6 2934.0 7 3195.0 8 3442.0 9 3567.5 10 3363.5 11 3373.5 12 3428.5 13 3310.5 14 3230.0 15 3289.0 16 3402.5 17 3657.0 18 3901.5 19 3913.0 20 4172.0 21 4464.0 22 5183.0 23 5858.5 24 6692.0 25 7727.0 26 8793.0 27 12215.0 28 15886.0 29 17043.0 30 19935.0 31 24936.5 32 27536.0 33 29422.5 34 31970.5 35 33926.5 36 34731.0 37 38399.0 38 44378.0 39 50662.0 40 61653.0 41 75021.0 42 90773.5 43 100176.0 44 97713.5 45 98728.0 46 104821.5 47 104247.0 48 104361.0 49 101013.0 50 94360.0 51 80218.5 52 58979.5 53 49070.0 54 42661.5 55 38727.0 56 38628.5 57 38868.0 58 34763.0 59 25969.5 60 18336.5 61 13951.5 62 9986.0 63 7040.0 64 6619.0 65 5590.5 66 3955.5 67 2675.0 68 1603.5 69 1296.5 70 1169.0 71 951.0 72 754.5 73 477.5 74 261.5 75 101.0 76 56.5 77 84.0 78 93.0 79 55.0 80 36.5 81 17.0 82 12.0 83 6.5 84 3.5 85 2.0 86 2.0 87 2.5 88 1.5 89 0.5 90 1.0 91 1.0 92 0.5 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1698558.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 15.455378617091622 #Duplication Level Percentage of deduplicated Percentage of total 1 79.87123515675891 12.344401799624682 2 9.204470419619208 2.845171506100701 3 2.939635119422854 1.3629952130033862 4 1.3068706689230847 0.8079272396711227 5 0.7511691563176082 0.5804801858184957 6 0.4855927352767188 0.45030117464465 7 0.37523660366194234 0.40595966464108074 8 0.3031327598495723 0.37480252597752395 9 0.222067363729703 0.30889216664477637 >10 1.8793822990839426 6.489855880522705 >50 0.7480814324849072 8.584519523550856 >100 1.8939643629477267 62.787770320618854 >500 0.01647925285446221 1.5785048620767814 >1k 0.0022994306308551926 0.5125846557753272 >5k 3.8323843847586536E-4 0.5658332813290616 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9553 0.5624182394713634 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 1965 0.11568636455157846 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1886 0.11103536058232925 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0555765537591298 0.0 2 0.0 0.0 0.0 0.1877474893409586 0.0 3 0.0 0.0 0.0 0.26027960187406024 0.0 4 0.0 0.0 0.0 0.390802080352864 0.0 5 0.0 0.0 0.0 0.6459008170459885 0.0 6 0.0 0.0 0.0 0.8434801755371321 0.0 7 0.0 0.0 0.0 0.9747091356315181 0.0 8 0.0 0.0 0.0 1.2593034797751976 0.0 9 0.0 0.0 0.0 1.3380761799126082 0.0 10 5.8873467965179875E-5 0.0 0.0 1.513754608320705 0.0 11 5.8873467965179875E-5 0.0 0.0 1.8108890011409677 0.0 12 5.8873467965179875E-5 0.0 0.0 2.0460885056618614 0.0 13 5.8873467965179875E-5 0.0 0.0 2.1256854343507845 0.0 14 5.8873467965179875E-5 0.0 0.0 2.1548278009935484 0.0 15 5.8873467965179875E-5 0.0 0.0 2.20928575886134 0.0 16 5.8873467965179875E-5 0.0 0.0 2.3279746702791426 0.0 17 5.8873467965179875E-5 0.0 0.0 2.484872462406347 0.0 18 5.8873467965179875E-5 0.0 0.0 2.6666148580148574 0.0 19 5.8873467965179875E-5 0.0 0.0 2.7783567002127687 0.0 20 5.8873467965179875E-5 0.0 0.0 2.9000481584967956 0.0 21 5.8873467965179875E-5 0.0 0.0 3.0645995014594734 0.0 22 5.8873467965179875E-5 0.0 0.0 3.2394537013160574 0.0 23 5.8873467965179875E-5 0.0 0.0 3.423551035643175 0.0 24 5.8873467965179875E-5 0.0 0.0 3.551188714191685 0.0 25 2.354938718607195E-4 0.0 0.0 3.6606933646069195 0.0 26 2.354938718607195E-4 0.0 0.0 3.7779104393255927 0.0 27 2.354938718607195E-4 0.0 0.0 3.895892869127813 0.0 28 2.354938718607195E-4 0.0 0.0 4.02747507002999 0.0 29 2.354938718607195E-4 0.0 0.0 4.16818265846677 0.0 30 2.354938718607195E-4 0.0 0.0 4.343095731791319 0.0 31 2.354938718607195E-4 0.0 0.0 4.510119760408535 0.0 32 2.354938718607195E-4 0.0 0.0 4.639818010335826 0.0 33 2.354938718607195E-4 0.0 0.0 4.781055459984293 0.0 34 2.354938718607195E-4 0.0 0.0 4.928710117640963 0.0 35 2.354938718607195E-4 0.0 0.0 5.112984072371977 0.0 36 2.354938718607195E-4 0.0 0.0 5.258872525989692 0.0 37 2.943673398258994E-4 0.0 0.0 5.42524894645929 0.0 38 2.943673398258994E-4 0.0 0.0 5.601928223822796 0.0 39 2.943673398258994E-4 0.0 0.0 5.825470781686583 0.0 40 2.943673398258994E-4 0.0 0.0 6.01910561782406 0.0 41 2.943673398258994E-4 0.0 0.0 6.202437597067631 0.0 42 2.943673398258994E-4 0.0 0.0 6.389949592536728 0.0 43 2.943673398258994E-4 0.0 0.0 6.573104951376402 0.0 44 2.943673398258994E-4 0.0 0.0 6.74071771467327 0.0 45 2.943673398258994E-4 0.0 0.0 6.925874771423761 0.0 46 2.943673398258994E-4 0.0 0.0 7.128929362435666 0.0 47 2.943673398258994E-4 0.0 0.0 7.326508720926809 0.0 48 2.943673398258994E-4 0.0 0.0 7.521262152955624 0.0 49 2.943673398258994E-4 0.0 0.0 7.745040204691273 0.0 50 2.943673398258994E-4 0.0 0.0 7.96163569333517 0.0 51 2.943673398258994E-4 0.0 0.0 8.164101549667423 0.0 52 2.943673398258994E-4 0.0 0.0 8.404658539773148 0.0 53 2.943673398258994E-4 0.0 0.0 8.625728411982399 0.0 54 2.943673398258994E-4 0.0 0.0 8.847092651531476 0.0 55 2.943673398258994E-4 0.0 0.0 9.100601804589541 0.0 56 2.943673398258994E-4 0.0 0.0 9.34427908849742 0.0 57 2.943673398258994E-4 0.0 0.0 9.595080062029085 0.0 58 2.943673398258994E-4 0.0 0.0 9.808143142595071 0.0 59 2.943673398258994E-4 0.0 0.0 10.04022235331381 0.0 60 2.943673398258994E-4 0.0 0.0 10.312571016120733 0.0 61 3.5324080779107925E-4 0.0 0.0 10.578090356643694 0.0 62 3.5324080779107925E-4 0.0 0.0 10.882466186023674 0.0 63 3.5324080779107925E-4 0.0 0.0 11.182720872646092 0.0 64 3.5324080779107925E-4 0.0 0.0 11.478089061427399 0.0 65 3.5324080779107925E-4 0.0 0.0 11.746375454944724 0.0 66 3.5324080779107925E-4 0.0 0.0 12.006007448671166 0.0 67 3.5324080779107925E-4 0.0 0.0 12.277943997202334 0.0 68 3.5324080779107925E-4 0.0 0.0 12.564304545384967 0.0 69 3.5324080779107925E-4 0.0 0.0 12.935855001713218 0.0 70 3.5324080779107925E-4 0.0 0.0 13.206437460481185 0.0 71 3.5324080779107925E-4 0.0 0.0 13.491385045432656 0.0 72 3.5324080779107925E-4 0.0 0.0 13.762673985816203 0.0 73 3.5324080779107925E-4 0.0 0.0 14.03949703218848 0.0 74 3.5324080779107925E-4 0.0 0.0 14.35865010202772 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TACGTAG 165 0.0 72.72727 1 TACGGGA 745 0.0 71.94631 4 TTGTACG 145 0.0 71.72414 1 CGTTTTT 5470 0.0 70.127975 1 TAGGGAC 1900 0.0 69.89474 5 GGGCGAT 745 0.0 69.26175 7 TAGCGGG 1630 0.0 68.71166 3 TAGGGTA 1140 0.0 68.070175 5 CGGGACT 760 0.0 67.89474 6 ATAGCGG 345 0.0 67.246376 2 TAAGTCG 90 0.0 66.666664 1 ATATACG 90 0.0 66.666664 1 AGTTGCG 145 0.0 66.206894 1 CGTTAGG 230 0.0 66.08696 2 GTACGGG 605 0.0 65.45455 3 TCTAGCG 55 9.094947E-12 65.454544 1 TTATAGG 710 0.0 65.35211 2 AGGGTAA 1260 0.0 65.07936 6 TCGTTAG 105 0.0 64.76191 1 GTTAGCG 260 0.0 64.61538 1 >>END_MODULE