##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547764_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 1712412 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.74050286963651 31.0 31.0 33.0 30.0 34.0 2 32.17216300750053 33.0 31.0 34.0 30.0 34.0 3 32.315615050583624 34.0 31.0 34.0 30.0 34.0 4 35.90535688841237 37.0 35.0 37.0 35.0 37.0 5 35.84935284265703 37.0 35.0 37.0 35.0 37.0 6 35.90257075984051 37.0 35.0 37.0 35.0 37.0 7 36.17526915251703 37.0 35.0 37.0 35.0 37.0 8 36.11808256424272 37.0 35.0 37.0 35.0 37.0 9 37.954642924716715 39.0 39.0 39.0 35.0 39.0 10-11 37.45786177625478 39.0 37.0 39.0 34.5 39.0 12-13 36.478893805929886 39.0 35.0 39.0 33.0 39.0 14-15 37.45310474348463 40.0 35.0 41.0 33.0 41.0 16-17 37.66075249414276 39.5 35.0 41.0 33.0 41.0 18-19 37.53434074276518 39.0 35.0 41.0 33.0 41.0 20-21 37.29781413585049 39.0 35.0 41.0 33.0 41.0 22-23 37.10206743470613 39.0 35.0 41.0 32.5 41.0 24-25 37.010824497842805 38.0 35.0 41.0 33.0 41.0 26-27 36.98395362798205 38.0 35.0 41.0 33.0 41.0 28-29 36.98924966655221 38.5 35.0 41.0 33.0 41.0 30-31 36.811004302702855 38.0 35.0 41.0 32.0 41.0 32-33 36.451750805296854 38.0 35.0 41.0 31.0 41.0 34-35 36.17031532131286 38.0 35.0 41.0 30.5 41.0 36-37 35.94577093596635 38.0 35.0 41.0 30.0 41.0 38-39 35.8586534665723 38.0 35.0 41.0 30.0 41.0 40-41 35.694346045227434 38.0 35.0 40.5 29.0 41.0 42-43 35.6461829863374 38.0 35.0 40.0 29.0 41.0 44-45 35.504879374823346 37.5 35.0 40.0 29.0 41.0 46-47 35.439125338995524 37.0 35.0 40.0 29.0 41.0 48-49 35.33398124983941 37.0 35.0 40.0 28.5 41.0 50-51 35.1446401333324 36.5 34.0 40.0 28.0 41.0 52-53 34.919755584520544 36.0 34.0 40.0 27.0 41.0 54-55 34.69697099763374 36.0 34.0 40.0 27.0 41.0 56-57 34.36409637400345 35.5 34.0 39.5 25.5 41.0 58-59 34.05735652401408 35.0 34.0 39.0 25.5 41.0 60-61 33.76302723877198 35.0 33.0 39.0 25.0 40.5 62-63 33.36860492685172 35.0 33.0 38.0 24.0 40.0 64-65 33.06911917225527 35.0 33.0 37.5 23.0 40.0 66-67 32.82598259063823 35.0 33.0 37.0 22.5 40.0 68-69 32.47486556973438 35.0 32.5 36.5 21.0 39.0 70-71 32.24749038198751 35.0 32.0 36.0 20.5 39.0 72-73 32.016267405273965 35.0 32.0 35.5 20.0 38.5 74-75 31.74118115266653 35.0 32.0 35.0 20.0 37.5 76-77 29.705593922490614 32.5 28.5 34.5 17.0 35.5 78-79 30.791296428663195 34.0 30.5 35.0 18.0 36.0 80-81 31.127370048796667 34.5 31.0 35.0 19.0 36.0 82-83 30.986889837258794 34.5 31.0 35.0 18.0 36.0 84-85 30.798390515833805 34.0 31.0 35.0 17.5 36.0 86 30.421647360565096 34.0 31.0 35.0 16.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 7 1.0 8 0.0 9 1.0 10 9.0 11 13.0 12 31.0 13 90.0 14 310.0 15 957.0 16 2331.0 17 4618.0 18 8751.0 19 13168.0 20 16006.0 21 16217.0 22 14943.0 23 14366.0 24 14784.0 25 16633.0 26 19536.0 27 23503.0 28 28655.0 29 35382.0 30 43558.0 31 52358.0 32 63484.0 33 85402.0 34 218428.0 35 196682.0 36 143842.0 37 238838.0 38 306236.0 39 132706.0 40 573.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 33.74509171858174 22.44383944985202 29.35152288117579 14.459545950390442 2 31.593331511341898 24.662464406930106 29.98723438051123 13.756969701216763 3 29.868045774031017 23.641565230797262 31.911888026946787 14.578500968224937 4 26.4118681719119 27.147964391746847 31.865754269416474 14.574413166924781 5 24.670756803853276 30.554737995295522 30.078567540988963 14.69593765986223 6 23.50240479510772 39.68349906447747 26.848328556445527 9.96576758396928 7 85.45303349894769 4.606543285143996 7.797422582883091 2.14300063302523 8 85.15678469900935 4.420022751534093 7.9747747621483605 2.4484177873081947 9 80.38205758894472 6.612077000161176 9.703914712113674 3.3019506987804337 10-11 42.859574681793866 26.045922359805935 19.68971252245371 11.40479043594649 12-13 31.180726367252742 26.982496034832735 26.80365472795098 15.033122869963536 14-15 15.575836889720465 32.344552595987416 36.51127765981551 15.56833285447661 16-17 20.028065675783633 23.45559947022095 35.41016998245749 21.106164871537924 18-19 24.336900231953525 25.89233782524299 31.58407556125512 18.186686381548366 20-21 26.672377909054596 26.406992008932427 29.934063765028508 16.986566316984465 22-23 20.946711422251187 24.49098114238863 31.133307872170953 23.428999563189233 24-25 19.101828298330076 25.69080922114538 36.801920332256486 18.405442148268055 26-27 17.82733944868408 33.860513708149675 29.86757859673957 18.444568246426677 28-29 16.430099765710587 28.308053202149953 36.61402746535297 18.6478195667865 30-31 23.394778826590798 28.975620353045876 30.642187744538113 16.987413075825213 32-33 26.26029833941832 28.58173149919529 28.100509690424968 17.057460470961427 34-35 19.90099345251026 28.93719502082443 29.55004403145972 21.611767495205594 36-37 23.40838536520417 28.758850089814835 30.51292562771109 17.31983891726991 38-39 19.647257786093533 31.200756593623495 28.60056458375671 20.551421036526257 40-41 20.32965781599288 26.590621883051508 29.589695704071218 23.490024596884396 42-43 21.739190101447548 25.664559697082247 28.5457004505925 24.05054975087771 44-45 18.771884336246185 32.49127546408224 28.020885160814103 20.715955038857473 46-47 21.81154418446028 30.947283714433212 27.352996825530308 19.888175275576206 48-49 21.700385187676797 26.968568311831497 31.02109772648171 20.309948774009992 50-51 19.289808760975745 31.61555163126631 28.258882792225236 20.83575681553271 52-53 22.564108403818707 26.63716442071184 30.708088941212747 20.09063823425671 54-55 23.023810858601784 26.620258442477628 31.030820853859936 19.325109845060652 56-57 24.075339345905075 24.03084070889482 29.831927129686083 22.06189281551402 58-59 24.074988962936487 27.15354132066349 28.49880752996358 20.272662186436442 60-61 24.020329219837283 29.18430260941876 27.617331576746718 19.178036593997238 62-63 23.761629794698937 25.55150279255226 31.047201257641266 19.639666155107534 64-65 19.861020595510894 30.427811764925732 30.677722417268743 19.033445222294635 66-67 18.31013798081303 29.287198407859787 26.082332989958022 26.32033062136916 68-69 17.79504581841286 32.79829854030456 24.580503990862013 24.826151650420577 70-71 19.48176023059871 30.23329082019981 28.50996138779686 21.774987561404615 72-73 23.451248881694358 30.061369576947605 26.836941109966528 19.650440431391512 74-75 21.61305223275707 32.496706400095306 24.46800185936562 21.422239507782006 76-77 27.39431281724258 27.752229019651814 26.260064750772592 18.593393412333015 78-79 19.236054173878717 29.799399910769136 30.24289715325518 20.721648762096972 80-81 17.10178391648739 28.78142059270783 31.77007052041214 22.34672497039264 82-83 19.274888286230183 26.69053942625957 32.72182745741095 21.312744830099298 84-85 17.495497578853687 26.261904261357667 30.676934055589427 25.56566410419922 86 19.258741471094574 26.93335482348874 31.307302214653948 22.500601490762737 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 1693.0 1 2061.5 2 5198.0 3 5074.5 4 2281.0 5 2794.0 6 3625.0 7 4041.0 8 4023.0 9 3943.5 10 3814.0 11 3857.0 12 4032.0 13 4253.5 14 4411.0 15 4536.0 16 4725.5 17 4887.0 18 5397.5 19 5934.0 20 5675.5 21 5294.0 22 6200.5 23 7200.0 24 8115.0 25 9340.0 26 11049.5 27 13687.5 28 16241.0 29 17463.0 30 19829.5 31 22371.5 32 24086.5 33 28889.0 34 34308.0 35 38678.5 36 40893.0 37 44539.5 38 48629.5 39 55238.0 40 64849.0 41 74876.0 42 86748.5 43 92040.0 44 96120.5 45 99148.5 46 99405.0 47 103508.5 48 102904.0 49 91847.0 50 84189.0 51 75231.5 52 57812.0 53 45434.0 54 42250.5 55 40248.5 56 35964.5 57 34415.0 58 31507.5 59 24206.0 60 17403.5 61 13434.0 62 11234.5 63 8959.5 64 7323.0 65 6545.5 66 5064.5 67 3743.0 68 2580.0 69 1831.5 70 1458.0 71 1288.0 72 1071.5 73 638.5 74 325.0 75 223.5 76 221.5 77 134.5 78 40.0 79 35.0 80 26.0 81 13.5 82 9.5 83 7.0 84 6.0 85 7.0 86 7.0 87 5.0 88 2.0 89 1.0 90 0.5 91 0.5 92 0.5 93 0.0 94 0.5 95 0.5 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 1712412.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 16.411951326569362 #Duplication Level Percentage of deduplicated Percentage of total 1 80.39717279503617 13.1947448670592 2 8.87614976116162 2.9134987569504958 3 2.757843522421607 1.3578478096883406 4 1.3071603108945093 0.8581220559369586 5 0.7338051802425714 0.602158745066277 6 0.5156744456364928 0.5077934341285056 7 0.3404041674290982 0.391068763904541 8 0.27719288597836744 0.3639420922198606 9 0.22895434986120217 0.3381828881335545 >10 1.9951118162801713 7.324619563891025 >50 0.7538265921313708 9.139120019780485 >100 1.799156665638605 60.13712335404281 >500 0.013966383351892039 1.4084417253771793 >1k 0.0032230115427443165 0.8037827172533091 >5k 0.0 0.0 >10k+ 3.5811239363825736E-4 0.6595532065674639 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11222 0.6553329455761815 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 3622 0.2115145187022749 No Hit AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2256 0.1317439961878333 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.06534642364103965 0.0 2 0.0 0.0 0.0 0.21910614968827596 0.0 3 0.0 0.0 0.0 0.3047747855072261 0.0 4 0.0 0.0 0.0 0.436343590210767 0.0 5 0.0 0.0 0.0 0.7004155542007414 0.0 6 0.0 0.0 0.0 0.9088350233471851 0.0 7 0.0 0.0 0.0 1.040929402503603 0.0 8 0.0 0.0 0.0 1.3158048413582712 0.0 9 0.0 0.0 0.0 1.3964513212941745 0.0 10 0.0 0.0 0.0 1.5561091606459194 0.0 11 5.839716143077717E-5 0.0 0.0 1.8391602021008964 0.0 12 5.839716143077717E-5 0.0 0.0 2.0605438410849723 0.0 13 5.839716143077717E-5 0.0 0.0 2.1407815408908606 0.0 14 5.839716143077717E-5 0.0 0.0 2.180199624856635 0.0 15 5.839716143077717E-5 0.0 0.0 2.246480403080567 0.0 16 5.839716143077717E-5 0.0 0.0 2.382837775021432 0.0 17 5.839716143077717E-5 0.0 0.0 2.5416780541131456 0.0 18 5.839716143077717E-5 0.0 0.0 2.7252203324900783 0.0 19 5.839716143077717E-5 0.0 0.0 2.8427738184502327 0.0 20 5.839716143077717E-5 0.0 0.0 2.9707803963064965 0.0 21 5.839716143077717E-5 0.0 0.0 3.1348180227655496 0.0 22 5.839716143077717E-5 0.0 0.0 3.305804911434865 0.0 23 5.839716143077717E-5 0.0 0.0 3.483215487861566 0.0 24 5.839716143077717E-5 0.0 0.0 3.609119767906322 0.0 25 5.839716143077717E-5 0.0 0.0 3.721475906499137 0.0 26 5.839716143077717E-5 0.0 0.0 3.8416572647236764 0.0 27 5.839716143077717E-5 0.0 0.0 3.964875275342616 0.0 28 5.839716143077717E-5 0.0 0.0 4.103276547933558 0.0 29 5.839716143077717E-5 0.0 0.0 4.246057607631808 0.0 30 5.839716143077717E-5 0.0 0.0 4.427147205228648 0.0 31 5.839716143077717E-5 0.0 0.0 4.596849356346486 0.0 32 5.839716143077717E-5 0.0 0.0 4.747981210129338 0.0 33 5.839716143077717E-5 0.0 0.0 4.899463446880774 0.0 34 5.839716143077717E-5 0.0 0.0 5.064318633599858 0.0 35 5.839716143077717E-5 0.0 0.0 5.268591904284716 0.0 36 5.839716143077717E-5 0.0 0.0 5.432863119389492 0.0 37 5.839716143077717E-5 0.0 0.0 5.605835511547455 0.0 38 5.839716143077717E-5 0.0 0.0 5.784238839718479 0.0 39 5.839716143077717E-5 0.0 0.0 6.027404619916235 0.0 40 5.839716143077717E-5 0.0 0.0 6.231911479246817 0.0 41 5.839716143077717E-5 0.0 0.0 6.434724820895906 0.0 42 5.839716143077717E-5 0.0 0.0 6.641100389392272 0.0 43 5.839716143077717E-5 0.0 0.0 6.825635419513528 0.0 44 5.839716143077717E-5 0.0 0.0 7.017178109006477 0.0 45 5.839716143077717E-5 0.0 0.0 7.216954798261166 0.0 46 5.839716143077717E-5 0.0 0.0 7.431622763680703 0.0 47 5.839716143077717E-5 0.0 0.0 7.6579701613863955 0.0 48 5.839716143077717E-5 0.0 0.0 7.8619514462641 0.0 49 5.839716143077717E-5 0.0 0.0 8.085437383059684 0.0 50 5.839716143077717E-5 0.0 0.0 8.325741702347333 0.0 51 5.839716143077717E-5 0.0 0.0 8.558279199164687 0.0 52 5.839716143077717E-5 0.0 0.0 8.825154226903338 0.0 53 5.839716143077717E-5 0.0 0.0 9.049282532474662 0.0 54 5.839716143077717E-5 0.0 0.0 9.29490099345251 0.0 55 5.839716143077717E-5 0.0 0.0 9.55038857471216 0.0 56 5.839716143077717E-5 0.0 0.0 9.800386822797318 0.0 57 5.839716143077717E-5 0.0 0.0 10.055932801218399 0.0 58 5.839716143077717E-5 0.0 0.0 10.286543191708537 0.0 59 5.839716143077717E-5 0.0 0.0 10.541271609869588 0.0 60 5.839716143077717E-5 0.0 0.0 10.80592754547387 0.0 61 5.839716143077717E-5 0.0 0.0 11.091840047838955 0.0 62 5.839716143077717E-5 0.0 0.0 11.378219727495486 0.0 63 5.839716143077717E-5 0.0 0.0 11.681009009514066 0.0 64 5.839716143077717E-5 0.0 0.0 11.977783383905274 0.0 65 5.839716143077717E-5 0.0 0.0 12.250439730625574 0.0 66 5.839716143077717E-5 0.0 0.0 12.507679226728147 0.0 67 5.839716143077717E-5 0.0 0.0 12.771751190718122 0.0 68 5.839716143077717E-5 0.0 0.0 13.075474827319594 0.0 69 5.839716143077717E-5 0.0 0.0 13.46136327005417 0.0 70 5.839716143077717E-5 0.0 0.0 13.742078425051915 0.0 71 5.839716143077717E-5 0.0 0.0 14.028399707547015 0.0 72 5.839716143077717E-5 0.0 0.0 14.319976734570886 0.0 73 1.1679432286155434E-4 0.0 0.0 14.618211037997865 0.0 74 1.1679432286155434E-4 0.0 0.0 14.931570206235415 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGGTTA 15 0.001309901 80.00001 1 TATAGCG 55 0.0 72.72727 1 TACGTAG 110 0.0 72.72727 1 CGTTTTT 5875 0.0 70.94468 1 CGAACGG 75 0.0 69.333336 2 ACGTTAG 35 1.1818338E-7 68.57143 1 GGCGATA 165 0.0 67.878784 8 CGTATGG 190 0.0 67.36842 2 GTACGGG 570 0.0 65.96491 3 GGGCGAT 810 0.0 65.67901 7 TAGGGAC 1640 0.0 64.87805 5 CTATGCG 105 0.0 64.76191 1 AACGTAG 100 0.0 64.0 1 CTAGACG 50 3.0013325E-10 64.0 1 TGCGTCG 100 0.0 64.0 1 TCGTTAG 95 0.0 63.157894 1 TAGAACG 140 0.0 62.857143 1 TAGCGGG 1015 0.0 62.660095 3 TATTGCG 90 0.0 62.22222 1 TTAGGGA 2010 0.0 61.492542 4 >>END_MODULE