##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR1547763_1.fastq.gz File type Conventional base calls Encoding Illumina 1.5 Total Sequences 2763790 Sequences flagged as poor quality 0 Sequence length 86 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.80713983334479 31.0 31.0 33.0 30.0 34.0 2 32.249169075798086 33.0 31.0 34.0 31.0 34.0 3 32.40531552686709 34.0 31.0 34.0 31.0 34.0 4 35.98140307331599 37.0 35.0 37.0 35.0 37.0 5 35.942257913951494 37.0 35.0 37.0 35.0 37.0 6 35.99983211459626 37.0 35.0 37.0 35.0 37.0 7 36.22718549528003 37.0 35.0 37.0 35.0 37.0 8 36.17081254364478 37.0 35.0 37.0 35.0 37.0 9 38.02617456463769 39.0 39.0 39.0 35.0 39.0 10-11 37.54527152931301 39.0 37.5 39.0 35.0 39.0 12-13 36.71660545844655 39.0 35.0 39.0 33.0 39.0 14-15 37.75999931253821 40.0 35.0 41.0 33.0 41.0 16-17 37.9065563953846 40.0 35.0 41.0 33.5 41.0 18-19 37.781250384435864 39.5 36.0 41.0 33.5 41.0 20-21 37.60567264517203 39.0 35.0 41.0 33.5 41.0 22-23 37.40118062515604 39.0 35.0 41.0 33.0 41.0 24-25 37.333297211437916 39.0 35.0 41.0 33.0 41.0 26-27 37.30121264640222 39.0 35.0 41.0 33.0 41.0 28-29 37.28841916353993 39.0 35.0 41.0 33.0 41.0 30-31 37.133271341165575 39.0 35.0 41.0 33.0 41.0 32-33 36.83803888862757 39.0 35.0 41.0 32.0 41.0 34-35 36.562629034767475 39.0 35.0 41.0 31.0 41.0 36-37 36.365157446839305 39.0 35.0 41.0 30.5 41.0 38-39 36.291460820105726 38.5 35.0 41.0 30.5 41.0 40-41 36.12960083797973 38.0 35.0 41.0 30.0 41.0 42-43 36.1089084192359 38.0 35.0 41.0 30.0 41.0 44-45 36.01109255768347 38.0 35.0 41.0 30.0 41.0 46-47 35.90593731795831 38.0 35.0 40.5 30.0 41.0 48-49 35.80987357939641 38.0 35.0 40.0 30.0 41.0 50-51 35.653990715647716 38.0 35.0 40.0 29.0 41.0 52-53 35.46545269358381 37.0 35.0 40.0 29.0 41.0 54-55 35.283179438379904 37.0 34.5 40.0 28.5 41.0 56-57 35.021526780254646 36.0 34.0 40.0 28.0 41.0 58-59 34.74392012417731 36.0 34.0 40.0 27.0 41.0 60-61 34.44262932422507 35.5 34.0 39.0 26.5 41.0 62-63 34.06457545616708 35.0 33.5 39.0 26.0 40.5 64-65 33.77478607274793 35.0 33.0 38.5 26.0 40.0 66-67 33.504505769251644 35.0 33.0 38.0 25.0 40.0 68-69 33.124370339280475 35.0 33.0 37.0 24.0 40.0 70-71 32.865974259983574 35.0 33.0 37.0 24.0 39.0 72-73 32.61577019238075 35.0 33.0 36.0 24.0 39.0 74-75 32.3374782454528 35.0 33.0 36.0 23.5 38.5 76-77 30.29592552256141 33.0 29.5 34.5 19.5 36.0 78-79 31.387088020435705 34.0 31.5 35.0 20.0 37.0 80-81 31.628111759576527 35.0 32.0 35.0 20.0 36.5 82-83 31.48982864110515 35.0 32.0 35.0 20.0 36.0 84-85 31.282004783286716 35.0 32.0 35.0 19.5 36.0 86 30.866391802560976 34.0 31.0 35.0 19.0 35.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 8 8.0 9 11.0 10 24.0 11 30.0 12 45.0 13 140.0 14 453.0 15 1393.0 16 3513.0 17 7110.0 18 13310.0 19 19463.0 20 22877.0 21 22470.0 22 20329.0 23 18292.0 24 18445.0 25 21089.0 26 25466.0 27 31609.0 28 38761.0 29 48255.0 30 61011.0 31 76078.0 32 96254.0 33 130191.0 34 324587.0 35 296530.0 36 233271.0 37 404210.0 38 557065.0 39 270317.0 40 1183.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 32.98492287764266 23.762803975700038 29.459003759330482 13.793269387326824 2 31.14335749098159 24.84128678372814 29.95169676422594 14.063658961064334 3 29.833308608830627 24.270440228816227 31.53962493532432 14.356626227028826 4 27.007117038559368 26.29360407266833 32.22889582783062 14.470383060941677 5 24.33220324264868 31.20830453833323 29.471233342620096 14.988258876397989 6 22.548493192319246 39.28909215244284 27.376320197988996 10.786094457248922 7 86.20119473621368 4.438289450356214 7.1389287898139875 2.2215870236161215 8 86.6095470350497 3.8406680681238448 7.16161502863821 2.388169868188249 9 81.8029589802409 6.348818108466997 8.714627377622756 3.1335955336693457 10-11 40.45920637964534 27.33767760936974 19.96179159776973 12.241324413215187 12-13 30.1340188653986 26.49186443253648 26.919646572279373 16.45447012978555 14-15 16.223935248336524 32.11314897296828 34.77576082119119 16.88715495750401 16-17 20.772924136783185 25.688149244334774 33.300594473530914 20.23833214535113 18-19 23.83715839481292 28.0259534914013 29.967038016636575 18.169850097149205 20-21 26.452100195745697 27.463012746988735 29.328422202844646 16.756464854420923 22-23 21.62485210526125 25.081608950028766 30.999696069527715 22.293842875182268 24-25 19.962099146461924 26.129951986221815 34.55313175024152 19.35481711707474 26-27 17.705542027433342 34.33231178924593 29.31646398604814 18.64568219727259 28-29 16.70439866994236 29.115851783239684 35.58417969527352 18.59556985154444 30-31 21.792755600099863 29.430528368653192 30.705824248586183 18.070891782660766 32-33 25.122567199389245 28.612593576212376 28.942683778434684 17.322155445963695 34-35 20.162277162881406 28.945632627659844 29.764978525864844 21.127111683593906 36-37 22.386632124727278 29.79685504325582 29.650606594567602 18.1659062374493 38-39 19.91802922798042 31.024444693699593 28.358413627663463 20.699112450656525 40-41 20.405692907203516 27.22028446444918 29.557455523031777 22.816567105315528 42-43 21.02073601829372 27.22542233671878 28.16002663009852 23.593815014888975 44-45 19.43244602520452 31.69519030027607 28.166069057345165 20.706294617174244 46-47 20.542497801931408 30.5389519464214 28.17108029191798 20.747469959729212 48-49 21.453258026116313 26.803266528933094 30.981297421294673 20.762178023655924 50-51 19.046291505505124 31.126062399820537 28.65939525072455 21.168250843949792 52-53 21.437301676321283 27.36045430369167 30.158007663389764 21.04423635659728 54-55 21.15658208474595 27.56871904160591 31.633734835135808 19.640964038512333 56-57 22.028410262718946 26.11220461757225 29.399972501528698 22.459412618180107 58-59 22.31435818206159 28.27391010170816 28.84025197283441 20.571479743395845 60-61 23.37221713661313 29.42117527019057 27.032535033414263 20.17407255978204 62-63 22.57470719555393 26.297005199382006 31.305833655957944 19.82245394910612 64-65 19.391542049142664 30.217834929571353 30.20670890335373 20.183914117932257 66-67 18.617460081988863 29.963057974737588 26.604680529273207 24.81480141400034 68-69 17.871093679331644 32.09323067237381 26.12904743124478 23.906628217049775 70-71 19.625984608092512 30.065200322745216 28.665292949174866 21.643522119987406 72-73 21.195640768654638 30.86276453710304 27.35260276649094 20.588991927751383 74-75 20.255771965308508 32.69291443995383 25.1087275082405 21.942586086497165 76-77 23.945397443365813 28.78972353181682 26.609058575362095 20.655820449455277 78-79 18.74299422170281 30.11954598576592 29.66697903965207 21.470480752879197 80-81 16.809037589686625 29.259477022494472 30.537685569453537 23.39379981836536 82-83 18.674627956537943 28.083030910452678 31.33617242988794 21.906168703121438 84-85 17.30225523646876 27.766310030791054 30.03737621165139 24.894058521088795 86 18.486715705607153 27.644755932976096 30.572474753870594 23.29605360754616 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 2008.0 1 2391.0 2 6463.5 3 6642.5 4 3632.5 5 4579.5 6 5348.0 7 5670.0 8 6057.5 9 6435.0 10 6332.0 11 6203.5 12 6230.0 13 6366.0 14 6440.0 15 6483.0 16 6518.5 17 6954.0 18 7325.0 19 7284.5 20 8602.5 21 9889.0 22 10700.5 23 11290.0 24 11834.5 25 15051.5 26 19415.5 27 24304.5 28 31158.5 29 35037.0 30 38806.0 31 46436.0 32 52609.0 33 54519.5 34 61253.5 35 73399.0 36 78409.0 37 79654.5 38 84359.0 39 89664.0 40 106750.5 41 128393.0 42 137172.5 43 139550.0 44 139830.0 45 142506.0 46 152368.0 47 163032.0 48 160286.5 49 137708.0 50 121073.0 51 106224.0 52 86474.5 53 77627.0 54 71089.5 55 66624.5 56 62027.5 57 59305.0 58 52445.0 59 39560.0 60 29339.0 61 23746.5 62 21396.5 63 16946.5 64 13450.0 65 10446.0 66 5789.5 67 3796.5 68 2770.5 69 1631.0 70 829.5 71 482.0 72 444.5 73 429.0 74 331.0 75 179.0 76 103.5 77 50.5 78 31.5 79 22.0 80 23.0 81 27.0 82 21.0 83 10.0 84 5.0 85 2.5 86 3.0 87 3.5 88 2.5 89 3.5 90 3.0 91 1.0 92 1.0 93 0.0 94 0.0 95 0.0 96 0.0 97 0.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10-11 0.0 12-13 0.0 14-15 0.0 16-17 0.0 18-19 0.0 20-21 0.0 22-23 0.0 24-25 0.0 26-27 0.0 28-29 0.0 30-31 0.0 32-33 0.0 34-35 0.0 36-37 0.0 38-39 0.0 40-41 0.0 42-43 0.0 44-45 0.0 46-47 0.0 48-49 0.0 50-51 0.0 52-53 0.0 54-55 0.0 56-57 0.0 58-59 0.0 60-61 0.0 62-63 0.0 64-65 0.0 66-67 0.0 68-69 0.0 70-71 0.0 72-73 0.0 74-75 0.0 76-77 0.0 78-79 0.0 80-81 0.0 82-83 0.0 84-85 0.0 86 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 86 2763790.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 14.810191590115004 #Duplication Level Percentage of deduplicated Percentage of total 1 79.48555691462602 11.771963265526018 2 9.538397284814206 2.8253098250146222 3 3.000282495431714 1.3330427574543608 4 1.323027736558997 0.7837717702989978 5 0.7470743855434793 0.5532157390983186 6 0.5116861417449801 0.45469018759499386 7 0.37887562369888744 0.3927854403063388 8 0.28024434311236635 0.3320377930832057 9 0.2206032955384166 0.29404593651012406 >10 1.9084241095139491 6.238076630799069 >50 0.7051339367904723 7.714145042166893 >100 1.870164455060936 63.56410761217718 >500 0.02683621979549756 2.370039108996392 >1k 0.00344685391868776 0.828846410452583 >5k 0.0 0.0 >10k+ 2.4620385133484E-4 0.5439224805209265 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source CGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14917 0.539729863701656 No Hit GACCAGAAAAATGGTCCTGCCAAGCGGCTACAGTGTTCTTCTTTCAGATA 4125 0.14925157121199512 No Hit >>END_MODULE >>Adapter Content fail #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 3.618219908169579E-5 0.0 0.0 0.04848414676947235 0.0 2 3.618219908169579E-5 0.0 0.0 0.1667637555675359 0.0 3 3.618219908169579E-5 0.0 0.0 0.23413501025765343 0.0 4 3.618219908169579E-5 0.0 0.0 0.3464445562072372 0.0 5 3.618219908169579E-5 0.0 0.0 0.5710636481064046 0.0 6 3.618219908169579E-5 0.0 0.0 0.7453894832820149 0.0 7 3.618219908169579E-5 0.0 0.0 0.8662742104139606 0.0 8 3.618219908169579E-5 0.0 0.0 1.0974784625459966 0.0 9 3.618219908169579E-5 0.0 0.0 1.1721947036496985 0.0 10 3.618219908169579E-5 0.0 0.0 1.3151867544205602 0.0 11 3.618219908169579E-5 0.0 0.0 1.5799319051013283 0.0 12 3.618219908169579E-5 0.0 0.0 1.7729639372021753 0.0 13 3.618219908169579E-5 0.0 0.0 1.84518360656924 0.0 14 3.618219908169579E-5 0.0 0.0 1.8744188234272503 0.0 15 3.618219908169579E-5 0.0 0.0 1.9297414058231632 0.0 16 3.618219908169579E-5 0.0 0.0 2.038830736054476 0.0 17 3.618219908169579E-5 0.0 0.0 2.175707995180531 0.0 18 3.618219908169579E-5 0.0 0.0 2.337333878478466 0.0 19 3.618219908169579E-5 0.0 0.0 2.4493177846363148 0.0 20 3.618219908169579E-5 0.0 0.0 2.562857525354676 0.0 21 3.618219908169579E-5 0.0 0.0 2.7178620662206607 0.0 22 3.618219908169579E-5 0.0 0.0 2.878149208152573 0.0 23 3.618219908169579E-5 0.0 0.0 3.043465675756841 0.0 24 3.618219908169579E-5 0.0 0.0 3.160044721198065 0.0 25 3.618219908169579E-5 0.0 0.0 3.269495873420195 0.0 26 3.618219908169579E-5 0.0 0.0 3.3781510172625273 0.0 27 3.618219908169579E-5 0.0 0.0 3.4911118427955814 0.0 28 3.618219908169579E-5 0.0 0.0 3.6166640736090656 0.0 29 3.618219908169579E-5 0.0 0.0 3.7616823275285025 0.0 30 3.618219908169579E-5 0.0 0.0 3.9237062150163364 0.0 31 3.618219908169579E-5 0.0 0.0 4.077950929701605 0.0 32 3.618219908169579E-5 0.0 0.0 4.215841290401948 0.0 33 3.618219908169579E-5 0.0 0.0 4.358001150593931 0.0 34 3.618219908169579E-5 0.0 0.0 4.5095322003480725 0.0 35 3.618219908169579E-5 0.0 0.0 4.684581679505317 0.0 36 3.618219908169579E-5 0.0 0.0 4.840490775348344 0.0 37 3.618219908169579E-5 0.0 0.0 5.0099320136479255 0.0 38 3.618219908169579E-5 0.0 0.0 5.183136200652004 0.0 39 3.618219908169579E-5 0.0 0.0 5.406742190976884 0.0 40 3.618219908169579E-5 0.0 0.0 5.590873402103633 0.0 41 3.618219908169579E-5 0.0 0.0 5.782566692838457 0.0 42 3.618219908169579E-5 0.0 0.0 5.974296165772364 0.0 43 3.618219908169579E-5 0.0 0.0 6.146559615600317 0.0 44 3.618219908169579E-5 0.0 0.0 6.331740110500436 0.0 45 3.618219908169579E-5 0.0 0.0 6.513989847274938 0.0 46 3.618219908169579E-5 0.0 0.0 6.711689383057323 0.0 47 3.618219908169579E-5 0.0 0.0 6.924947264444838 0.0 48 3.618219908169579E-5 3.618219908169579E-5 0.0 7.1225020714308975 0.0 49 3.618219908169579E-5 3.618219908169579E-5 0.0 7.341657651268728 0.0 50 3.618219908169579E-5 3.618219908169579E-5 0.0 7.553070240503077 0.0 51 3.618219908169579E-5 3.618219908169579E-5 0.0 7.763361181565894 0.0 52 3.618219908169579E-5 3.618219908169579E-5 0.0 8.00162096251886 0.0 53 3.618219908169579E-5 3.618219908169579E-5 0.0 8.210790255410144 0.0 54 3.618219908169579E-5 3.618219908169579E-5 0.0 8.431176030016752 0.0 55 7.236439816339158E-5 3.618219908169579E-5 0.0 8.659992257009396 0.0 56 7.236439816339158E-5 3.618219908169579E-5 0.0 8.89347598768358 0.0 57 1.0854659724508736E-4 3.618219908169579E-5 0.0 9.110967186363652 0.0 58 1.0854659724508736E-4 3.618219908169579E-5 0.0 9.337865756804968 0.0 59 1.0854659724508736E-4 3.618219908169579E-5 0.0 9.57305005083599 0.0 60 1.0854659724508736E-4 3.618219908169579E-5 0.0 9.824226876861122 0.0 61 1.0854659724508736E-4 3.618219908169579E-5 0.0 10.082133591915449 0.0 62 1.0854659724508736E-4 3.618219908169579E-5 0.0 10.366055308109516 0.0 63 1.0854659724508736E-4 3.618219908169579E-5 0.0 10.682939007667008 0.0 64 1.0854659724508736E-4 3.618219908169579E-5 0.0 10.956114610733811 0.0 65 1.4472879632678316E-4 3.618219908169579E-5 0.0 11.225382536299792 0.0 66 1.4472879632678316E-4 3.618219908169579E-5 0.0 11.47775337489462 0.0 67 1.4472879632678316E-4 3.618219908169579E-5 0.0 11.737794839694766 0.0 68 1.4472879632678316E-4 3.618219908169579E-5 0.0 12.015420853248619 0.0 69 1.4472879632678316E-4 3.618219908169579E-5 0.0 12.358066278552277 0.0 70 1.8091099540847892E-4 3.618219908169579E-5 0.0 12.624656721386213 0.0 71 1.8091099540847892E-4 3.618219908169579E-5 0.0 12.892224083595353 0.0 72 2.1709319449017471E-4 3.618219908169579E-5 0.0 13.168547537982263 0.0 73 2.1709319449017471E-4 3.618219908169579E-5 0.0 13.44262769602611 0.0 74 2.1709319449017471E-4 3.618219908169579E-5 0.0 13.745979253127047 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TCGATAG 100 0.0 72.0 1 CGTTTTT 8365 0.0 70.101616 1 CGTAAGG 390 0.0 69.74359 2 GCGTAAG 315 0.0 68.57143 1 AGGGCGA 1035 0.0 66.47343 6 AGTACGG 345 0.0 66.08696 2 ATAACGG 200 0.0 66.0 2 GCGATAA 190 0.0 65.26315 9 TACGGGA 1190 0.0 64.87395 4 CTATACG 25 1.2358325E-4 64.0 1 TAATGCG 50 3.0013325E-10 64.0 1 CGAGGGA 1180 0.0 63.389828 4 GGGCGAT 1670 0.0 62.994015 7 GGCGATA 395 0.0 62.784813 8 AGGGATT 5035 0.0 62.284008 6 GCGAACG 135 0.0 62.22222 1 TGCGCGG 450 0.0 62.22222 2 AGCGGGA 1440 0.0 61.944447 4 GAGGGAT 4090 0.0 61.613697 5 GATCGTT 280 0.0 61.428566 9 >>END_MODULE